RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 SSR1P43307 286 aaKnown RBP7.12□□□□□ -1.27
TOP3A-207ENST00000493648 HCAR3P49019 387 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 SERPINH1P50454 418 aaKnown RBP7.12□□□□□ -1.27
TOP3A-207ENST00000493648 DNA2P51530 1060 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 ATXN3P54252 364 aaPredicted RBP7.12□□□□□ -1.27
TOP3A-207ENST00000493648 ARF5P84085 180 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 ZNF252P-AS1Q0IIN9 211 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 TBX2Q13207 712 aaPredicted RBP7.12□□□□□ -1.27
TOP3A-207ENST00000493648 SEMA3BQ13214 749 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 HADHQ16836 314 aaKnown RBP7.12□□□□□ -1.27
TOP3A-207ENST00000493648 ASTE1Q2TB18 679 aaPredicted RBP7.12□□□□□ -1.27
TOP3A-207ENST00000493648 PPP6R3Q5H9R7 873 aaPredicted RBP7.12□□□□□ -1.27
TOP3A-207ENST00000493648 DAB2IPQ5VWQ8 1189 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 KIAA0895LQ68EN5 471 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 TBC1D3GQ6DHY5 549 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 TBC1D3CQ6IPX1 549 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 C22orf39Q6P5X5 142 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 DGLUCYQ7Z3D6 616 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 PLPP6Q8IY26 295 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 TBC1D3Q8IZP1 549 aaPredicted RBP7.12□□□□□ -1.27
TOP3A-207ENST00000493648 UMODL1-AS1Q8N2C9 162 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 RYBPQ8N488 228 aaPredicted RBP7.12□□□□□ -1.27
TOP3A-207ENST00000493648 AADATQ8N5Z0 425 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 PCDH20Q8N6Y1 951 aaKnown RBP7.12□□□□□ -1.27
TOP3A-207ENST00000493648 NIPA2Q8N8Q9 360 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 OR2A12Q8NGT7 310 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 OR2T34Q8NGX1 318 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 PIP4K2CQ8TBX8 421 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 CASKIN2Q8WXE0 1202 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 SNX19Q92543 992 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 ISG20Q96AZ6 181 aaKnown RBP7.12□□□□□ -1.27
TOP3A-207ENST00000493648 BIRC7Q96CA5 298 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 PPP1R16AQ96I34 528 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 PEBP4Q96S96 227 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 KCTD15Q96SI1 283 aaPredicted RBP7.12□□□□□ -1.27
TOP3A-207ENST00000493648 CHP1Q99653 195 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 HEPHQ9BQS7 1158 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 SNRNP25Q9BV90 132 aaKnown RBP7.12□□□□□ -1.27
TOP3A-207ENST00000493648 EDEM2Q9BV94 578 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 GTPBP2Q9BX10 602 aaKnown RBP7.12□□□□□ -1.27
TOP3A-207ENST00000493648 TRIM7Q9C029 511 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 RBSNQ9H1K0 784 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 TNKS2Q9H2K2 1166 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 KDM4CQ9H3R0 1056 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 C6orf106Q9H6K1 298 aaPredicted RBP7.12□□□□□ -1.27
TOP3A-207ENST00000493648 ZWILCHQ9H900 591 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 NHEJ1Q9H9Q4 299 aaPredicted RBP7.12□□□□□ -1.27
TOP3A-207ENST00000493648 TMEM9BQ9NQ34 198 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 DYRK4Q9NR20 520 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 RXFP3Q9NSD7 469 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 GPATCH2LQ9NWQ4 482 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 UVRAGQ9P2Y5 699 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 IL36AQ9UHA7 158 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 EIF2B4Q9UI10 523 aaKnown RBP7.12□□□□□ -1.27
TOP3A-207ENST00000493648 NEU3Q9UQ49 428 aa7.12□□□□□ -1.27
TOP3A-207ENST00000493648 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.12□□□□□ -1.27
TOP3A-207ENST00000493648 TNRC6BQ9UPQ9 1833 aaKnown RBP7.12□□□□□ -1.27
TOP3A-207ENST00000493648 USP34Q70CQ2 3546 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 LNP1A1A4G5 178 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 C4orf47A7E2U8 309 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 RASA4BC9J798 803 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 H3BRJ5 948 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 KPNA3O00505 521 aaPredicted RBP7.11□□□□□ -1.27
TOP3A-207ENST00000493648 ARHGAP33O14559 1287 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 BCAT2O15382 392 aaPredicted RBP7.11□□□□□ -1.27
TOP3A-207ENST00000493648 RASA4O43374 803 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 POP4O95707 220 aaKnown RBP7.11□□□□□ -1.27
TOP3A-207ENST00000493648 TMEM253P0C7T8 217 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 ERCC2P18074 760 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 CD27P26842 260 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 DRD3P35462 400 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 ARL4AP40617 200 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 PAPOLAP51003 745 aaKnown RBP7.11□□□□□ -1.27
TOP3A-207ENST00000493648 CCR5P51681 352 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 ZNF75DP51815 510 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 SNRPD1P62314 119 aaKnown RBP7.11□□□□□ -1.27
TOP3A-207ENST00000493648 RAD51Q06609 339 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 SERINC3Q13530 473 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 TEAD4Q15561 434 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 CA9Q16790 459 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 INO80DQ53TQ3 878 aaPredicted RBP7.11□□□□□ -1.27
TOP3A-207ENST00000493648 ARSIQ5FYB1 569 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 NCEH1Q6PIU2 408 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 DPY19L3Q6ZPD9 716 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 RFX8Q6ZV50 586 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 ERMP1Q7Z2K6 904 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 PRPF39Q86UA1 669 aaKnown RBP7.11□□□□□ -1.27
TOP3A-207ENST00000493648 LZTR1Q8N653 840 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 CHST14Q8NCH0 376 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 ZNF564Q8TBZ8 553 aaPredicted RBP7.11□□□□□ -1.27
TOP3A-207ENST00000493648 TEKT4Q8WW24 435 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 HSPH1Q92598 858 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 SKA1Q96BD8 255 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 ARHGEF26Q96DR7 871 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 HMCESQ96FZ2 354 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 LRIG1Q96JA1 1093 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 BTBD6Q96KE9 485 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 ZDHHC5Q9C0B5 715 aa7.11□□□□□ -1.27
TOP3A-207ENST00000493648 NOL6Q9H6R4 1146 aaKnown RBP7.11□□□□□ -1.27
TOP3A-207ENST00000493648 CAPN10Q9HC96 672 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms