RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 CNBD1Q8NA66 436 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 CCDC150Q8NCX0 1101 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 ZFPM2Q8WW38 1151 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 PHKBQ93100 1093 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 LRRC46Q96FV0 321 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 EIF3CQ99613 913 aaKnown RBP3.6□□□□□ -1.83
PTCD3-218ENST00000493430 CDCP1Q9H5V8 836 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 PRKRIP1Q9H875 184 aaPredicted RBP3.6□□□□□ -1.83
PTCD3-218ENST00000493430 PLK2Q9NYY3 685 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 TSPYL4Q9UJ04 414 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 LAMP3Q9UQV4 416 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 NIP7Q9Y221 180 aaKnown RBP eCLIP3.6□□□□□ -1.83
PTCD3-218ENST00000493430 PCDHGB6Q9Y5F9 930 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 RNF123Q5XPI4 1314 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 MAST2Q6P0Q8 1798 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 PLEKHG2Q9H7P9 1386 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 NAV1Q8NEY1 1877 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 RIC1Q4ADV7 1423 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 COL11A1P12107 1806 aaPredicted RBP3.59□□□□□ -1.83
PTCD3-218ENST00000493430 PARP14Q460N5 1801 aa3.59□□□□□ -1.83
PTCD3-218ENST00000493430 RPS10-NUDT3A0A1W2PQS6 291 aa3.59□□□□□ -1.83
PTCD3-218ENST00000493430 CLCA1A8K7I4 914 aa3.59□□□□□ -1.83
PTCD3-218ENST00000493430 VSTM5A8MXK1 200 aa3.59□□□□□ -1.83
PTCD3-218ENST00000493430 NPHP1O15259 732 aa3.59□□□□□ -1.83
PTCD3-218ENST00000493430 DDNO94850 711 aaPredicted RBP3.59□□□□□ -1.83
PTCD3-218ENST00000493430 NTSR2O95665 410 aa3.59□□□□□ -1.83
PTCD3-218ENST00000493430 IFNA2P01563 188 aa3.59□□□□□ -1.83
PTCD3-218ENST00000493430 FGF3P11487 239 aaPredicted RBP3.59□□□□□ -1.83
PTCD3-218ENST00000493430 ALADP13716 330 aa3.59□□□□□ -1.83
PTCD3-218ENST00000493430 RHCEP18577 417 aa3.59□□□□□ -1.83
PTCD3-218ENST00000493430 HOXA11P31270 313 aaPredicted RBP3.59□□□□□ -1.83
PTCD3-218ENST00000493430 SLC5A2P31639 672 aa3.59□□□□□ -1.83
PTCD3-218ENST00000493430 EGR4Q05215 589 aa3.59□□□□□ -1.83
PTCD3-218ENST00000493430 GBX1Q14549 363 aa3.59□□□□□ -1.83
PTCD3-218ENST00000493430 ZNF628Q5EBL2 1059 aa3.59□□□□□ -1.83
PTCD3-218ENST00000493430 LRIG3Q6UXM1 1119 aa3.59□□□□□ -1.83
PTCD3-218ENST00000493430 USP43Q70EL4 1123 aa3.59□□□□□ -1.83
PTCD3-218ENST00000493430 NBPF5PQ86XG9 351 aaPredicted RBP3.59□□□□□ -1.83
PTCD3-218ENST00000493430 DDIASQ8IXT1 998 aa3.59□□□□□ -1.83
PTCD3-218ENST00000493430 ATP11CQ8NB49 1132 aa3.59□□□□□ -1.83
PTCD3-218ENST00000493430 CLMNQ96JQ2 1002 aa3.59□□□□□ -1.83
PTCD3-218ENST00000493430 MAGEB5Q9BZ81 275 aa3.59□□□□□ -1.83
PTCD3-218ENST00000493430 WNT16Q9UBV4 365 aa3.59□□□□□ -1.83
PTCD3-218ENST00000493430 TCEAL9Q9UHQ7 104 aa3.59□□□□□ -1.83
PTCD3-218ENST00000493430 SLC8A2Q9UPR5 921 aa3.59□□□□□ -1.83
PTCD3-218ENST00000493430 MAP3K15Q6ZN16 1313 aa3.59□□□□□ -1.83
PTCD3-218ENST00000493430 DOCK1Q14185 1865 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 RHPN2P1A8MT19 583 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 RHODO00212 210 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 STARD3NLO95772 234 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 S100BP04271 92 aaPredicted RBP3.58□□□□□ -1.84
PTCD3-218ENST00000493430 RFPL3SP0C7P2 107 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 IDEP14735 1019 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 MST1P26927 711 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 RFX2P48378 723 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 ENTPD1P49961 510 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 ATP1A4Q13733 1029 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 CBFBQ13951 182 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 KEAP1Q14145 624 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 TAF7Q15545 349 aaPredicted RBP3.58□□□□□ -1.84
PTCD3-218ENST00000493430 P3H1Q32P28 736 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 GFOD2Q3B7J2 385 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 PLEKHG6Q3KR16 790 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 SLC39A5Q6ZMH5 540 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 CCDC28AQ8IWP9 274 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 MYO1HQ8N1T3 1032 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 ZBTB8BQ8NAP8 495 aaPredicted RBP3.58□□□□□ -1.84
PTCD3-218ENST00000493430 GRAMD1AQ96CP6 724 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 LMLNQ96KR4 655 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 GPR78Q96P69 363 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 NUDT22Q9BRQ3 303 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 ELOVL1Q9BW60 279 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 APOL5Q9BWW9 433 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 PRDM16Q9HAZ2 1276 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 SIRT3Q9NTG7 399 aaPredicted RBP3.58□□□□□ -1.84
PTCD3-218ENST00000493430 CORO2BQ9UQ03 480 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 NUDCQ9Y266 331 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 B3GNT3Q9Y2A9 372 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 ABCC4O15439 1325 aa3.58□□□□□ -1.84
PTCD3-218ENST00000493430 ASTN2O75129 1339 aaPredicted RBP3.58□□□□□ -1.84
PTCD3-218ENST00000493430 IFITM10A6NMD0 228 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 H0YIN7 160 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 SNAP23O00161 211 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 MDM4O15151 490 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 MCM3APO60318 1980 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 WNT1P04628 370 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 ACAA1P09110 424 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-218ENST00000493430 HOXC6P09630 235 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 MYL4P12829 197 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 MYH6P13533 1939 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 KLRK1P26718 216 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 WDR43Q15061 677 aaKnown RBP eCLIP3.57□□□□□ -1.84
PTCD3-218ENST00000493430 SLC4A8Q2Y0W8 1093 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 KRTAP27-1Q3LI81 207 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.57□□□□□ -1.84
PTCD3-218ENST00000493430 WASHC2DQ5SRD0 308 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 TTC39AQ5SRH9 613 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 KIAA0408Q6ZU52 694 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 PIK3AP1Q6ZUJ8 805 aa3.57□□□□□ -1.84
PTCD3-218ENST00000493430 TRILQ7L0X0 811 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms