RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 RASSF3Q86WH2 238 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 VSIG1Q86XK7 387 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 MMAAQ8IVH4 418 aaKnown RBP8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 MAML2Q8IZL2 1156 aaPredicted RBP8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 STK40Q8N2I9 435 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 CCNYQ8ND76 341 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 GAB3Q8WWW8 586 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 NKD2Q969F2 451 aaPredicted RBP8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 FAM122AQ96E09 287 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 ALG14Q96F25 216 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 MRGPRX3Q96LB0 322 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 MRGPRX1Q96LB2 322 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 GDAP1L1Q96MZ0 367 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 PSMB7Q99436 277 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 ACE2Q9BYF1 805 aaPredicted RBP8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 SLC39A8Q9C0K1 460 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 LACRTQ9GZZ8 138 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 ZDHHC6Q9H6R6 413 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 PRSS16Q9NQE7 514 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 FAM86C1Q9NVL1 165 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 C2orf42Q9NWW7 574 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 NCDNQ9UBB6 729 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 IPO11Q9UI26 975 aaKnown RBP8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 FCF1Q9Y324 198 aaKnown RBP8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 REXO2Q9Y3B8 237 aaKnown RBP8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 HEY1Q9Y5J3 304 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 OR51B4Q9Y5P0 310 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 DUSP10Q9Y6W6 482 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 EML5Q05BV3 1969 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 CACNA1HO95180 2353 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 ANKRD36A6QL64 1941 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 PLXND1Q9Y4D7 1925 aa8.29□□□□□ -1.08
TM4SF1-204ENST00000493348 MUC22E2RYF6 1773 aaPredicted RBP8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 WDFY4Q6ZS81 3184 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 RCCD1A6NED2 376 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 ANTXRLA6NF34 631 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 LRRC72A6NJI9 287 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 MEI4A8MW99 385 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 ZNF487B1APH4 448 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 KPNA3O00505 521 aaPredicted RBP8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 KRIT1O00522 736 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 MCF2LO15068 1137 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 DCLK1O15075 740 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 PRAMEF11O60813 436 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 TMCC1O94876 653 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 POP4O95707 220 aaKnown RBP8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 GSRP00390 522 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 MT-CO1P00395 513 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 LMNAP02545 664 aaKnown RBP8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 CD48P09326 243 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 C5AR1P21730 350 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 NFKBIAP25963 317 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 CHRNA3P32297 505 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 SLC8A1P32418 973 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 DPP6P42658 865 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 TNNT3P45378 269 aaPredicted RBP8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 MAPK8P45983 427 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 DHPSP49366 369 aaPredicted RBP8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 COPS2P61201 443 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 DYNLT1P63172 113 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 IL10RBQ08334 325 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 GRM3Q14832 879 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 PDK1Q15118 436 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 CST6Q15828 149 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 CARD16Q5EG05 197 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 SYCP2LQ5T4T6 812 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 C9orf64Q5T6V5 341 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 LEKR1Q6ZMV7 388 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 FAM124AQ86V42 546 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 KATNAL2Q8IYT4 538 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 ZBTB44Q8NCP5 570 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 TRIM58Q8NG06 486 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 OR52K2Q8NGK3 314 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 EXD1Q8NHP7 514 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 RAPGEF5Q92565 580 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 PTPRN2Q92932 1015 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 FOXJ1Q92949 421 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 ISG20Q96AZ6 181 aaKnown RBP8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 ZNF599Q96NL3 588 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 RNF157Q96PX1 679 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 HEPHQ9BQS7 1158 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 TM6SF2Q9BZW4 377 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 BTBD1Q9H0C5 482 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 RSPH9Q9H1X1 276 aaPredicted RBP8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 TNKS2Q9H2K2 1166 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 GOLPH3Q9H4A6 298 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 LRRC19Q9H756 370 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 FBXL12Q9NXK8 326 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 HECAQ9UBI9 543 aaPredicted RBP8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 ZNF212Q9UDV6 495 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 SEPT3Q9UH03 358 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 IL36AQ9UHA7 158 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 HCN2Q9UL51 889 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 NEU3Q9UQ49 428 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 INVSQ9Y283 1065 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 PPP2R2CQ9Y2T4 447 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 TTLL3Q9Y4R7 772 aa8.28□□□□□ -1.08
TM4SF1-204ENST00000493348 SDK1Q7Z5N4 2213 aa8.27□□□□□ -1.08
TM4SF1-204ENST00000493348 GRID2IPA4D2P6 1211 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 FAM47DPA6NHR8 397 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms