RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 PRNPP04156 253 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 RHOQP17081 205 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 GLDCP23378 1020 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 RRM1P23921 792 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 OR1E1P30953 314 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 ARRB1P49407 418 aaPredicted RBP8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 NUMBP49757 651 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 KLK7P49862 253 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 SERPINH1P50454 418 aaKnown RBP8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 HDAC4P56524 1084 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 POLR2FP61218 127 aaKnown RBP8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 ARF5P84085 180 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 GNA12Q03113 381 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 CCDC15Q0P6D6 951 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 INAVAQ3KP66 663 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 SETMARQ53H47 684 aaPredicted RBP8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 RAB6CQ53S08 254 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 SLC45A4Q5BKX6 768 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 RETSATQ6NUM9 610 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 C22orf39Q6P5X5 142 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 LRSAM1Q6UWE0 723 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 DPY19L3Q6ZPD9 716 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 STRADAQ7RTN6 431 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 ADAT2Q7Z6V5 191 aaKnown RBP8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 HORMAD1Q86X24 394 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 GATAD2AQ86YP4 633 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 PCDH20Q8N6Y1 951 aaKnown RBP8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 EMC1Q8N766 993 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 ATP11CQ8NB49 1132 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 CHST14Q8NCH0 376 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 MSANTD4Q8NCY6 345 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 OR7D4Q8NG98 312 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 RFFLQ8WZ73 363 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 ERGIC2Q96RQ1 377 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 ZYG11BQ9C0D3 744 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 RAB6CQ9H0N0 254 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 AASDHPPTQ9NRN7 309 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 TMEM248Q9NWD8 314 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 TAB2Q9NYJ8 693 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 OR12D3Q9UGF7 316 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 GPSM3Q9Y4H4 160 aa8.56□□□□□ -1.04
SMARCB1-207ENST00000491967 IGSF10Q6WRI0 2623 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 NBEAQ8NFP9 2946 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 TRABD2BA6NFA1 517 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 SIGLEC16A6NMB1 481 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 LGALS16A8MUM7 142 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 FAM72CH0Y354 149 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 ENC1O14682 589 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 AP1G1O43747 822 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 GFPT2O94808 682 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 GIMD1P0DJR0 217 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 ITGB7P26010 798 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 RFC1P35251 1148 aaPredicted RBP8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 MAPKAPK2P49137 400 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 ACADVLP49748 655 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 IL9RQ01113 521 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 BNIP3Q12983 259 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 ILKQ13418 452 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 STAT4Q14765 748 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 NCAPHQ15003 741 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 PROX2Q3B8N5 592 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 ARSIQ5FYB1 569 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 PPP1R15BQ5SWA1 713 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 FAM72AQ5TYM5 149 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 FAM72DQ6L9T8 149 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 LINGO4Q6UY18 593 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 ERN2Q76MJ5 926 aaKnown RBP8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 MON1BQ7L1V2 547 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 TFAP2DQ7Z6R9 452 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 ABI3BPQ7Z7G0 1075 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 ZSCAN30Q86W11 494 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 FAM72BQ86X60 149 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 FAM131BQ86XD5 332 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 SLC25A45Q8N413 288 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 JOSD2Q8TAC2 188 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 SLC30A5Q8TAD4 765 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 FAM174AQ8TBP5 190 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 RXFP2Q8WXD0 754 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 ASB12Q8WXK4 309 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 ARHGEF2Q92974 986 aaKnown RBP8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 NTAN1Q96AB6 310 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 IFT43Q96FT9 208 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 LRIG1Q96JA1 1093 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 CCDC114Q96M63 670 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 SYT11Q9BT88 431 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 C1QTNF2Q9BXJ5 285 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 MAGEH1Q9H213 219 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 VPS16Q9H269 839 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 PDCL3Q9H2J4 239 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 CCDC86Q9H6F5 360 aaKnown RBP8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 NOL6Q9H6R4 1146 aaKnown RBP8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 METTL5Q9NRN9 209 aaKnown RBP8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 FAM207AQ9NSI2 230 aaPredicted RBP8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 NDFIP2Q9NV92 336 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 KLHL11Q9NVR0 708 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 FTSJ1Q9UET6 329 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 IL36AQ9UHA7 158 aa8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 ZFR2Q9UPR6 939 aaKnown RBP8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 FARP1Q9Y4F1 1045 aaPredicted RBP8.55□□□□□ -1.04
SMARCB1-207ENST00000491967 HS3ST3A1Q9Y663 406 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms