RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 PLEKP08567 350 aaPredicted RBP18.39■□□□□ 0.53
HMGN1-219ENST00000491183 FERP16591 822 aa18.39■□□□□ 0.53
HMGN1-219ENST00000491183 RHOQP17081 205 aa18.39■□□□□ 0.53
HMGN1-219ENST00000491183 MAT2AP31153 395 aaKnown RBP18.39■□□□□ 0.53
HMGN1-219ENST00000491183 ACVRL1P37023 503 aa18.39■□□□□ 0.53
HMGN1-219ENST00000491183 CCT8P50990 548 aa18.39■□□□□ 0.53
HMGN1-219ENST00000491183 IL9RQ01113 521 aa18.39■□□□□ 0.53
HMGN1-219ENST00000491183 C1QBPQ07021 282 aaKnown RBP18.39■□□□□ 0.53
HMGN1-219ENST00000491183 SLC20A2Q08357 652 aa18.39■□□□□ 0.53
HMGN1-219ENST00000491183 SHBQ15464 509 aa18.39■□□□□ 0.53
HMGN1-219ENST00000491183 ARSIQ5FYB1 569 aa18.39■□□□□ 0.53
HMGN1-219ENST00000491183 PPP1R15BQ5SWA1 713 aa18.39■□□□□ 0.53
HMGN1-219ENST00000491183 ACAD10Q6JQN1 1059 aa18.39■□□□□ 0.53
HMGN1-219ENST00000491183 RETSATQ6NUM9 610 aa18.39■□□□□ 0.53
HMGN1-219ENST00000491183 RWDD4Q6NW29 188 aaKnown RBP18.39■□□□□ 0.53
HMGN1-219ENST00000491183 DPY19L3Q6ZPD9 716 aa18.39■□□□□ 0.53
HMGN1-219ENST00000491183 PRPF39Q86UA1 669 aaKnown RBP18.39■□□□□ 0.53
HMGN1-219ENST00000491183 TRIM69Q86WT6 500 aa18.39■□□□□ 0.53
HMGN1-219ENST00000491183 BAP1Q92560 729 aa18.39■□□□□ 0.53
HMGN1-219ENST00000491183 NTAN1Q96AB6 310 aa18.39■□□□□ 0.53
HMGN1-219ENST00000491183 ELF4Q99607 663 aaPredicted RBP18.39■□□□□ 0.53
HMGN1-219ENST00000491183 NAT10Q9H0A0 1025 aaKnown RBP18.39■□□□□ 0.53
HMGN1-219ENST00000491183 TLR4O00206 839 aa18.38■□□□□ 0.53
HMGN1-219ENST00000491183 KPNA3O00505 521 aaPredicted RBP18.38■□□□□ 0.53
HMGN1-219ENST00000491183 DFNA5O60443 496 aa18.38■□□□□ 0.53
HMGN1-219ENST00000491183 ATXN1LP0C7T5 689 aaKnown RBP18.38■□□□□ 0.53
HMGN1-219ENST00000491183 SERPINH1P50454 418 aaKnown RBP18.38■□□□□ 0.53
HMGN1-219ENST00000491183 RPL7AP62424 266 aaKnown RBP18.38■□□□□ 0.53
HMGN1-219ENST00000491183 NAPEPLDQ6IQ20 393 aa18.38■□□□□ 0.53
HMGN1-219ENST00000491183 MCOLN2Q8IZK6 566 aa18.38■□□□□ 0.53
HMGN1-219ENST00000491183 KDF1Q8NAX2 398 aaPredicted RBP18.38■□□□□ 0.53
HMGN1-219ENST00000491183 ARHGEF2Q92974 986 aaKnown RBP18.38■□□□□ 0.53
HMGN1-219ENST00000491183 SKA1Q96BD8 255 aa18.38■□□□□ 0.53
HMGN1-219ENST00000491183 CCDC114Q96M63 670 aa18.38■□□□□ 0.53
HMGN1-219ENST00000491183 CDC6Q99741 560 aa18.38■□□□□ 0.53
HMGN1-219ENST00000491183 TMEM248Q9NWD8 314 aa18.38■□□□□ 0.53
HMGN1-219ENST00000491183 TAS2R14Q9NYV8 317 aa18.38■□□□□ 0.53
HMGN1-219ENST00000491183 DNAI1Q9UI46 699 aa18.38■□□□□ 0.53
HMGN1-219ENST00000491183 APOBEC2Q9Y235 224 aaKnown RBP18.38■□□□□ 0.53
HMGN1-219ENST00000491183 WASF2Q9Y6W5 498 aa18.38■□□□□ 0.53
HMGN1-219ENST00000491183 CEP295Q9C0D2 2601 aa18.38■□□□□ 0.53
HMGN1-219ENST00000491183 PLXNB3Q9ULL4 1909 aa18.37■□□□□ 0.53
HMGN1-219ENST00000491183 SPEGQ15772 3267 aa18.37■□□□□ 0.53
HMGN1-219ENST00000491183 SMTNL1A8MU46 457 aa18.37■□□□□ 0.53
HMGN1-219ENST00000491183 CCP110O43303 1012 aa18.37■□□□□ 0.53
HMGN1-219ENST00000491183 PRNPP04156 253 aa18.37■□□□□ 0.53
HMGN1-219ENST00000491183 MAPKAPK2P49137 400 aa18.37■□□□□ 0.53
HMGN1-219ENST00000491183 ZNF143P52747 638 aaPredicted RBP18.37■□□□□ 0.53
HMGN1-219ENST00000491183 NXPH1P58417 271 aa18.37■□□□□ 0.53
HMGN1-219ENST00000491183 CAVIN1Q6NZI2 390 aaKnown RBP18.37■□□□□ 0.53
HMGN1-219ENST00000491183 DNAJC24Q6P3W2 148 aa18.37■□□□□ 0.53
HMGN1-219ENST00000491183 SLFN11Q7Z7L1 901 aa18.37■□□□□ 0.53
HMGN1-219ENST00000491183 SPATS2Q86XZ4 545 aaKnown RBP18.37■□□□□ 0.53
HMGN1-219ENST00000491183 GATAD2AQ86YP4 633 aa18.37■□□□□ 0.53
HMGN1-219ENST00000491183 PYROXD2Q8N2H3 581 aa18.37■□□□□ 0.53
HMGN1-219ENST00000491183 MFSD2AQ8NA29 543 aa18.37■□□□□ 0.53
HMGN1-219ENST00000491183 TBC1D31Q96DN5 1066 aa18.37■□□□□ 0.53
HMGN1-219ENST00000491183 NAP1L5Q96NT1 182 aaPredicted RBP18.37■□□□□ 0.53
HMGN1-219ENST00000491183 CEP44Q9C0F1 390 aa18.37■□□□□ 0.53
HMGN1-219ENST00000491183 RETREG1Q9H6L5 497 aa18.37■□□□□ 0.53
HMGN1-219ENST00000491183 PREBQ9HCU5 417 aa18.37■□□□□ 0.53
HMGN1-219ENST00000491183 IL36AQ9UHA7 158 aa18.37■□□□□ 0.53
HMGN1-219ENST00000491183 DMTF1Q9Y222 760 aa18.37■□□□□ 0.53
HMGN1-219ENST00000491183 FCF1Q9Y324 198 aaKnown RBP18.37■□□□□ 0.53
HMGN1-219ENST00000491183 USP24Q9UPU5 2620 aa18.37■□□□□ 0.53
HMGN1-219ENST00000491183 AKAP13Q12802 2813 aa18.36■□□□□ 0.53
HMGN1-219ENST00000491183 RNGTTO60942 597 aaKnown RBP18.36■□□□□ 0.53
HMGN1-219ENST00000491183 LEFTY1O75610 366 aa18.36■□□□□ 0.53
HMGN1-219ENST00000491183 DKK1O94907 266 aa18.36■□□□□ 0.53
HMGN1-219ENST00000491183 CCDC172P0C7W6 258 aa18.36■□□□□ 0.53
HMGN1-219ENST00000491183 TNFAIP3P21580 790 aa18.36■□□□□ 0.53
HMGN1-219ENST00000491183 PTPRBP23467 1997 aa18.36■□□□□ 0.53
HMGN1-219ENST00000491183 NUDT1P36639 197 aa18.36■□□□□ 0.53
HMGN1-219ENST00000491183 GRK6P43250 576 aa18.36■□□□□ 0.53
HMGN1-219ENST00000491183 RECQLP46063 649 aaPredicted RBP18.36■□□□□ 0.53
HMGN1-219ENST00000491183 OGDHQ02218 1023 aa18.36■□□□□ 0.53
HMGN1-219ENST00000491183 SCAPQ12770 1279 aa18.36■□□□□ 0.53
HMGN1-219ENST00000491183 CARD16Q5EG05 197 aa18.36■□□□□ 0.53
HMGN1-219ENST00000491183 NEK5Q6P3R8 708 aa18.36■□□□□ 0.53
HMGN1-219ENST00000491183 SCYL2Q6P3W7 929 aa18.36■□□□□ 0.53
HMGN1-219ENST00000491183 ERN2Q76MJ5 926 aaKnown RBP18.36■□□□□ 0.53
HMGN1-219ENST00000491183 PCDH20Q8N6Y1 951 aaKnown RBP18.36■□□□□ 0.53
HMGN1-219ENST00000491183 GRIN3AQ8TCU5 1115 aa18.36■□□□□ 0.53
HMGN1-219ENST00000491183 KLK6Q92876 244 aa18.36■□□□□ 0.53
HMGN1-219ENST00000491183 MCEEQ96PE7 176 aa18.36■□□□□ 0.53
HMGN1-219ENST00000491183 FUCA2Q9BTY2 467 aa18.36■□□□□ 0.53
HMGN1-219ENST00000491183 GDF3Q9NR23 364 aa18.36■□□□□ 0.53
HMGN1-219ENST00000491183 MYO6Q9UM54 1294 aa18.36■□□□□ 0.53
HMGN1-219ENST00000491183 CA5BQ9Y2D0 317 aa18.36■□□□□ 0.53
HMGN1-219ENST00000491183 A0A1W2PQU0 124 aa18.35■□□□□ 0.53
HMGN1-219ENST00000491183 L1CAMP32004 1257 aa18.35■□□□□ 0.53
HMGN1-219ENST00000491183 ZNF165P49910 485 aa18.35■□□□□ 0.53
HMGN1-219ENST00000491183 DNA2P51530 1060 aa18.35■□□□□ 0.53
HMGN1-219ENST00000491183 CCNHP51946 323 aaPredicted RBP18.35■□□□□ 0.53
HMGN1-219ENST00000491183 IQCB1Q15051 598 aa18.35■□□□□ 0.53
HMGN1-219ENST00000491183 SLC45A4Q5BKX6 768 aa18.35■□□□□ 0.53
HMGN1-219ENST00000491183 SAP25Q8TEE9 199 aa18.35■□□□□ 0.53
HMGN1-219ENST00000491183 VOPP1Q96AW1 172 aa18.35■□□□□ 0.53
HMGN1-219ENST00000491183 HEPHQ9BQS7 1158 aa18.35■□□□□ 0.53
HMGN1-219ENST00000491183 HDAC8Q9BY41 377 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms