RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 E4F1Q66K89 784 aaPredicted RBP32.03■■■□□ 2.72
LDB1-204ENST00000490751 PYROXD2Q8N2H3 581 aa32.03■■■□□ 2.72
LDB1-204ENST00000490751 TMIEQ8NEW7 156 aa32.03■■■□□ 2.72
LDB1-204ENST00000490751 SERAC1Q96JX3 654 aa32.03■■■□□ 2.72
LDB1-204ENST00000490751 CEP44Q9C0F1 390 aa32.03■■■□□ 2.72
LDB1-204ENST00000490751 HAUS4Q9H6D7 363 aa32.03■■■□□ 2.72
LDB1-204ENST00000490751 CBX8Q9HC52 389 aa32.03■■■□□ 2.72
LDB1-204ENST00000490751 PCOLCE2Q9UKZ9 415 aa32.03■■■□□ 2.72
LDB1-204ENST00000490751 H0Y8X5 98 aa32.02■■■□□ 2.72
LDB1-204ENST00000490751 WNT9AO14904 365 aa32.02■■■□□ 2.72
LDB1-204ENST00000490751 ZNF821O75541 412 aaPredicted RBP32.02■■■□□ 2.72
LDB1-204ENST00000490751 PRNPP04156 253 aa32.02■■■□□ 2.72
LDB1-204ENST00000490751 CD38P28907 300 aa32.02■■■□□ 2.72
LDB1-204ENST00000490751 NR1I3Q14994 352 aa32.02■■■□□ 2.72
LDB1-204ENST00000490751 ZNF423Q2M1K9 1284 aa32.02■■■□□ 2.72
LDB1-204ENST00000490751 EFHC2Q5JST6 749 aa32.02■■■□□ 2.72
LDB1-204ENST00000490751 DPY19L3Q6ZPD9 716 aa32.02■■■□□ 2.72
LDB1-204ENST00000490751 PRPF39Q86UA1 669 aaKnown RBP32.02■■■□□ 2.72
LDB1-204ENST00000490751 GRIN3AQ8TCU5 1115 aa32.02■■■□□ 2.72
LDB1-204ENST00000490751 ARRDC3Q96B67 414 aa32.02■■■□□ 2.72
LDB1-204ENST00000490751 SKA1Q96BD8 255 aa32.02■■■□□ 2.72
LDB1-204ENST00000490751 VCPIP1Q96JH7 1222 aa32.02■■■□□ 2.72
LDB1-204ENST00000490751 TTYH3Q9C0H2 523 aa32.02■■■□□ 2.72
LDB1-204ENST00000490751 AIPL1Q9NZN9 384 aa32.02■■■□□ 2.72
LDB1-204ENST00000490751 IL36AQ9UHA7 158 aa32.02■■■□□ 2.72
LDB1-204ENST00000490751 ACTL7AQ9Y615 435 aa32.02■■■□□ 2.72
LDB1-204ENST00000490751 RNF103O00237 685 aa32.01■■■□□ 2.71
LDB1-204ENST00000490751 CBFA2T3O75081 653 aa32.01■■■□□ 2.71
LDB1-204ENST00000490751 MAT2AP31153 395 aaKnown RBP32.01■■■□□ 2.71
LDB1-204ENST00000490751 L1CAMP32004 1257 aa32.01■■■□□ 2.71
LDB1-204ENST00000490751 CCT8P50990 548 aa32.01■■■□□ 2.71
LDB1-204ENST00000490751 OGDHQ02218 1023 aa32.01■■■□□ 2.71
LDB1-204ENST00000490751 PIP5KL1Q5T9C9 394 aa32.01■■■□□ 2.71
LDB1-204ENST00000490751 LUZP1Q86V48 1076 aa32.01■■■□□ 2.71
LDB1-204ENST00000490751 PCDH20Q8N6Y1 951 aaKnown RBP32.01■■■□□ 2.71
LDB1-204ENST00000490751 ARHGEF2Q92974 986 aaKnown RBP32.01■■■□□ 2.71
LDB1-204ENST00000490751 SCNM1Q9BWG6 230 aa32.01■■■□□ 2.71
LDB1-204ENST00000490751 MAGEH1Q9H213 219 aa32.01■■■□□ 2.71
LDB1-204ENST00000490751 DYRK4Q9NR20 520 aa32.01■■■□□ 2.71
LDB1-204ENST00000490751 FCF1Q9Y324 198 aaKnown RBP32.01■■■□□ 2.71
LDB1-204ENST00000490751 DOCK9Q9BZ29 2069 aa32.01■■■□□ 2.71
LDB1-204ENST00000490751 A0A1W2PR77 199 aa32■■■□□ 2.71
LDB1-204ENST00000490751 FLRT2O43155 660 aa32■■■□□ 2.71
LDB1-204ENST00000490751 RAMP2O60895 175 aa32■■■□□ 2.71
LDB1-204ENST00000490751 TAS2R38P59533 333 aa32■■■□□ 2.71
LDB1-204ENST00000490751 TPM4P67936 248 aa32■■■□□ 2.71
LDB1-204ENST00000490751 ARSIQ5FYB1 569 aa32■■■□□ 2.71
LDB1-204ENST00000490751 NAPEPLDQ6IQ20 393 aa32■■■□□ 2.71
LDB1-204ENST00000490751 DBX2Q6ZNG2 339 aa32■■■□□ 2.71
LDB1-204ENST00000490751 ZNF571Q7Z3V5 609 aaPredicted RBP32■■■□□ 2.71
LDB1-204ENST00000490751 TRIM69Q86WT6 500 aa32■■■□□ 2.71
LDB1-204ENST00000490751 PREBQ9HCU5 417 aa32■■■□□ 2.71
LDB1-204ENST00000490751 ARHGAP20Q9P2F6 1191 aa32■■■□□ 2.71
LDB1-204ENST00000490751 FZD10Q9ULW2 581 aa32■■■□□ 2.71
LDB1-204ENST00000490751 CABIN1Q9Y6J0 2220 aa31.99■■■□□ 2.71
LDB1-204ENST00000490751 ATMINO43313 823 aaPredicted RBP31.99■■■□□ 2.71
LDB1-204ENST00000490751 HYAL3O43820 417 aaPredicted RBP31.99■■■□□ 2.71
LDB1-204ENST00000490751 CD160O95971 181 aa31.99■■■□□ 2.71
LDB1-204ENST00000490751 DESP17661 470 aa31.99■■■□□ 2.71
LDB1-204ENST00000490751 PRKCIP41743 596 aa31.99■■■□□ 2.71
LDB1-204ENST00000490751 DNA2P51530 1060 aa31.99■■■□□ 2.71
LDB1-204ENST00000490751 SUZ12Q15022 739 aaKnown RBP31.99■■■□□ 2.71
LDB1-204ENST00000490751 TMC6Q7Z403 805 aa31.99■■■□□ 2.71
LDB1-204ENST00000490751 DNAAF5Q86Y56 855 aa31.99■■■□□ 2.71
LDB1-204ENST00000490751 EDEM3Q9BZQ6 932 aa31.99■■■□□ 2.71
LDB1-204ENST00000490751 PARVAQ9NVD7 372 aa31.99■■■□□ 2.71
LDB1-204ENST00000490751 WASF2Q9Y6W5 498 aa31.99■■■□□ 2.71
LDB1-204ENST00000490751 LEFTY1O75610 366 aa31.98■■■□□ 2.71
LDB1-204ENST00000490751 EPHB2P29323 1055 aa31.98■■■□□ 2.71
LDB1-204ENST00000490751 KLHL30Q0D2K2 578 aa31.98■■■□□ 2.71
LDB1-204ENST00000490751 CCDC15Q0P6D6 951 aa31.98■■■□□ 2.71
LDB1-204ENST00000490751 MAMLD1Q13495 774 aa31.98■■■□□ 2.71
LDB1-204ENST00000490751 SLC45A4Q5BKX6 768 aa31.98■■■□□ 2.71
LDB1-204ENST00000490751 CARD16Q5EG05 197 aa31.98■■■□□ 2.71
LDB1-204ENST00000490751 PLEKHA7Q6IQ23 1121 aa31.98■■■□□ 2.71
LDB1-204ENST00000490751 EPAS1Q99814 870 aa31.98■■■□□ 2.71
LDB1-204ENST00000490751 HPCAL4Q9UM19 191 aa31.98■■■□□ 2.71
LDB1-204ENST00000490751 DMTF1Q9Y222 760 aa31.98■■■□□ 2.71
LDB1-204ENST00000490751 MAP1BP46821 2468 aaKnown RBP31.97■■■□□ 2.71
LDB1-204ENST00000490751 CXorf51AA0A1B0GTR3 108 aa31.97■■■□□ 2.71
LDB1-204ENST00000490751 CREB3O43889 395 aa31.97■■■□□ 2.71
LDB1-204ENST00000490751 DFNA5O60443 496 aa31.97■■■□□ 2.71
LDB1-204ENST00000490751 TRIM16O95361 564 aa31.97■■■□□ 2.71
LDB1-204ENST00000490751 NUDT1P36639 197 aa31.97■■■□□ 2.71
LDB1-204ENST00000490751 CCNHP51946 323 aaPredicted RBP31.97■■■□□ 2.71
LDB1-204ENST00000490751 AIF1P55008 147 aa31.97■■■□□ 2.71
LDB1-204ENST00000490751 GEMIN4P57678 1058 aaKnown RBP31.97■■■□□ 2.71
LDB1-204ENST00000490751 FANCCQ00597 558 aa31.97■■■□□ 2.71
LDB1-204ENST00000490751 IL9RQ01113 521 aa31.97■■■□□ 2.71
LDB1-204ENST00000490751 POLD3Q15054 466 aaPredicted RBP31.97■■■□□ 2.71
LDB1-204ENST00000490751 ERN2Q76MJ5 926 aaKnown RBP31.97■■■□□ 2.71
LDB1-204ENST00000490751 RTL3Q8N8U3 475 aaKnown RBP31.97■■■□□ 2.71
LDB1-204ENST00000490751 BAHD1Q8TBE0 780 aaPredicted RBP31.97■■■□□ 2.71
LDB1-204ENST00000490751 RHBDD1Q8TEB9 315 aa31.97■■■□□ 2.71
LDB1-204ENST00000490751 PPP1R16AQ96I34 528 aa31.97■■■□□ 2.71
LDB1-204ENST00000490751 HEPHQ9BQS7 1158 aa31.97■■■□□ 2.71
LDB1-204ENST00000490751 TM6SF2Q9BZW4 377 aa31.97■■■□□ 2.71
LDB1-204ENST00000490751 BTBD3Q9Y2F9 522 aa31.97■■■□□ 2.71
LDB1-204ENST00000490751 A0A1B0GTQ1 180 aa31.96■■■□□ 2.71
LDB1-204ENST00000490751 DDX3XO00571 662 aaKnown RBP eCLIP31.96■■■□□ 2.714e-10■■■□□ 17.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms