RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 SPTLC1O15269 473 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 HBP1O60381 514 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 H6PDO95479 791 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 CLIC3O95833 236 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 PAN2Q504Q3 1202 aaKnown RBP13.01□□□□□ -0.33
SHOX2-205ENST00000490689 BTBD8Q5XKL5 378 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 TAF2Q6P1X5 1199 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 TAS2R42Q7RTR8 314 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 LINC00523Q86TU6 105 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 METTL23Q86XA0 190 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 NAT16Q8N8M0 369 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 CMASQ8NFW8 434 aaPredicted RBP13.01□□□□□ -0.33
SHOX2-205ENST00000490689 FIG4Q92562 907 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 EMID1Q96A84 441 aaPredicted RBP13.01□□□□□ -0.33
SHOX2-205ENST00000490689 GJD4Q96KN9 370 aaPredicted RBP13.01□□□□□ -0.33
SHOX2-205ENST00000490689 FBXL18Q96ME1 805 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 NSMCE2Q96MF7 247 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 TWNKQ96RR1 684 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 TCF12Q99081 682 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 OSBPL6Q9BZF3 934 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 FADS3Q9Y5Q0 445 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 KPNA4O00629 521 aaPredicted RBP13.01□□□□□ -0.33
SHOX2-205ENST00000490689 UBA1P22314 1058 aaKnown RBP13.01□□□□□ -0.33
SHOX2-205ENST00000490689 STT3AP46977 705 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 TKTL1P51854 596 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 BST2Q10589 180 aaKnown RBP13.01□□□□□ -0.33
SHOX2-205ENST00000490689 KCNJ11Q14654 390 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 GRM3Q14832 879 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 RAB6CQ53S08 254 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 MICALL2Q8IY33 904 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 NXNL1Q96CM4 212 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 NTPCRQ9BSD7 190 aaKnown RBP13.01□□□□□ -0.33
SHOX2-205ENST00000490689 OXCT2Q9BYC2 517 aaPredicted RBP13.01□□□□□ -0.33
SHOX2-205ENST00000490689 RAB6CQ9H0N0 254 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 RBM22Q9NW64 420 aaKnown RBP eCLIP13.01□□□□□ -0.33
SHOX2-205ENST00000490689 CD274Q9NZQ7 290 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 BTRCQ9Y297 605 aa13.01□□□□□ -0.33
SHOX2-205ENST00000490689 NUP188Q5SRE5 1749 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 PMM2O15305 246 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 MTSS1O43312 755 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 LTFP02788 710 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 CCNA2P20248 432 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 SLC25A11Q02978 314 aaKnown RBP13□□□□□ -0.33
SHOX2-205ENST00000490689 FRG1Q14331 258 aaKnown RBP13□□□□□ -0.33
SHOX2-205ENST00000490689 TRIM60Q495X7 471 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 FBXO48Q5FWF7 155 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 GALNT18Q6P9A2 607 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 ADGRF2Q8IZF7 708 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 BBS5Q8N3I7 341 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 CERKQ8TCT0 537 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 FNIP1Q8TF40 1166 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 EXOSC4Q9NPD3 245 aaKnown RBP13□□□□□ -0.33
SHOX2-205ENST00000490689 ATAD3AQ9NVI7 634 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 MAP3K20Q9NYL2 800 aaKnown RBP13□□□□□ -0.33
SHOX2-205ENST00000490689 MFSD11O43934 449 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 FKBP9O95302 570 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 BNIP3Q12983 259 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 ABRAXAS1Q6UWZ7 409 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 FKBP9P1Q75LS8 142 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 SLC4A11Q8NBS3 891 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 FAM8A1Q9UBU6 413 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 ANXA9O76027 345 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 RHOBTB1O94844 696 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 YBX3P16989 372 aaKnown RBP eCLIP13□□□□□ -0.33
SHOX2-205ENST00000490689 ADORA2AP29274 412 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 INPP1P49441 399 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 MRPS5P82675 430 aaKnown RBP13□□□□□ -0.33
SHOX2-205ENST00000490689 ZNF252P-AS1Q0IIN9 211 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 SH3D19Q5HYK7 790 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 CLEC6AQ6EIG7 209 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 EFHBQ8N7U6 833 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 CLEC4DQ8WXI8 215 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 BORCS5Q969J3 196 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 LPIN3Q9BQK8 851 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 TBCDQ9BTW9 1192 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 ERAP1Q9NZ08 941 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 MORF4L1Q9UBU8 362 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 NUDT5Q9UKK9 219 aa13□□□□□ -0.33
SHOX2-205ENST00000490689 TMEM114B3SHH9 223 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 CCNT2O60583 730 aaKnown RBP12.99□□□□□ -0.33
SHOX2-205ENST00000490689 CABYRO75952 493 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 INSRRP14616 1297 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 ERCC2P18074 760 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 GRM1Q13255 1194 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 METTL21CQ5VZV1 264 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 MBLAC2Q68D91 279 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 OLFML1Q6UWY5 402 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 CAND1Q86VP6 1230 aaKnown RBP12.99□□□□□ -0.33
SHOX2-205ENST00000490689 C1orf127Q8N9H9 656 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 CALML6Q8TD86 181 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 HPS1Q92902 700 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 COPS5Q92905 334 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 ROGDIQ9GZN7 287 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 LHX5Q9H2C1 402 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 OCEL1Q9H607 264 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 COQ6Q9Y2Z9 468 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 TRIM17Q9Y577 477 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 BCLAF3A2AJT9 711 aaKnown RBP12.99□□□□□ -0.33
SHOX2-205ENST00000490689 TRIM43BA6NCK2 446 aa12.99□□□□□ -0.33
SHOX2-205ENST00000490689 TOR1BO14657 336 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms