RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 SIX4Q9UIU6 781 aa14.59□□□□□ -0.07
ARHGEF39-205ENST00000490638 CYP1A1P04798 512 aaPredicted RBP14.58□□□□□ -0.07
ARHGEF39-205ENST00000490638 ELFN1P0C7U0 828 aa14.58□□□□□ -0.07
ARHGEF39-205ENST00000490638 CES1P23141 567 aa14.58□□□□□ -0.07
ARHGEF39-205ENST00000490638 JAM2P57087 298 aa14.58□□□□□ -0.07
ARHGEF39-205ENST00000490638 UBXN2BQ14CS0 331 aa14.58□□□□□ -0.07
ARHGEF39-205ENST00000490638 PDCD2Q16342 344 aaPredicted RBP14.58□□□□□ -0.07
ARHGEF39-205ENST00000490638 PPP1R15BQ5SWA1 713 aa14.58□□□□□ -0.07
ARHGEF39-205ENST00000490638 TMEM40Q8WWA1 233 aa14.58□□□□□ -0.07
ARHGEF39-205ENST00000490638 ADAMTS10Q9H324 1103 aa14.58□□□□□ -0.07
ARHGEF39-205ENST00000490638 ELOVL6Q9H5J4 265 aa14.58□□□□□ -0.07
ARHGEF39-205ENST00000490638 GLOD4Q9HC38 313 aa14.58□□□□□ -0.07
ARHGEF39-205ENST00000490638 MAN1C1Q9NR34 630 aa14.58□□□□□ -0.07
ARHGEF39-205ENST00000490638 PNMA8BQ9ULN7 279 aaPredicted RBP14.58□□□□□ -0.07
ARHGEF39-205ENST00000490638 REXO2Q9Y3B8 237 aaKnown RBP14.58□□□□□ -0.07
ARHGEF39-205ENST00000490638 DGKGP49619 791 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 ARHGDIAP52565 204 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 ERVK-21P61565 698 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 TEX44Q53QW1 395 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 PRR23CQ6ZRP0 262 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 GRASPQ7Z6J2 395 aaPredicted RBP14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 LCA5Q86VQ0 697 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 CIR1Q86X95 450 aaPredicted RBP14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 RPL10LQ96L21 214 aaKnown RBP14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 MRPL40Q9NQ50 206 aaKnown RBP14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 GGT7Q9UJ14 662 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 CHADO15335 359 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 ZBTB14O43829 449 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 MGEA5O60502 916 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 RNASEH2AO75792 299 aaKnown RBP14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 ITGAVP06756 1048 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 CALRP27797 417 aaKnown RBP14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 PYROXD2Q8N2H3 581 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 CASP10Q92851 521 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 MED8Q96G25 268 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 RAD18Q9NS91 495 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 ZMYM5Q9UJ78 669 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 CDYLQ9Y232 598 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 ARL2BPQ9Y2Y0 163 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 IGKV6-21A0A0C4DH24 114 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 LOC100653049A0A140TA62 436 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 KRT34O76011 436 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 HOXB8P17481 243 aaPredicted RBP14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 HLA-DPA1P20036 260 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 CAP1Q01518 475 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 GALNT3Q14435 633 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 AHCYL2Q96HN2 611 aaKnown RBP14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 LRRC19Q9H756 370 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 ACTR5Q9H9F9 607 aaPredicted RBP14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 SIX2Q9NPC8 291 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 TMPRSS4Q9NRS4 437 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 VPS45Q9NRW7 570 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 SNX10Q9Y5X0 201 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 STYXL1Q9Y6J8 313 aa14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 ZFP37Q9Y6Q3 630 aaPredicted RBP14.58□□□□□ -0.08
ARHGEF39-205ENST00000490638 TCHHQ07283 1943 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 RPN2P04844 631 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 FGF1P05230 155 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 ADRA1DP25100 572 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 RPS24P62847 133 aaKnown RBP14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 OSTM1Q86WC4 334 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 CCDC185Q8N715 623 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 C12orf50Q8NA57 414 aaPredicted RBP14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 PLEKHO2Q8TD55 490 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 SAGE1Q9NXZ1 904 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 NHSQ6T4R5 1651 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 C5orf58C9J3I9 102 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 ANKRD65E5RJM6 399 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 HCRTO43612 131 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 CCNT2O60583 730 aaKnown RBP14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 ENO3P13929 434 aaPredicted RBP14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 GDI1P31150 447 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 HOXD13P35453 343 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 CNGA3Q16281 694 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 PTPRNQ16849 979 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 GRAMD1BQ3KR37 738 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 C1orf146Q5VVC0 180 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 UNC5AQ6ZN44 842 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 ALLCQ8N6M5 410 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 PLD5Q8N7P1 536 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 ZNF333Q96JL9 665 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 MAGEH1Q9H213 219 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 COL22A1Q8NFW1 1626 aaPredicted RBP14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 RAD51BO15315 384 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 CHRNB2P17787 502 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 LRPAP1P30533 357 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 CDH4P55283 916 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 C2orf27AQ580R0 203 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 SYPL2Q5VXT5 272 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 MFSD5Q6N075 450 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 ZCCHC9Q8N567 271 aaKnown RBP14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 CRYGNQ8WXF5 182 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 NINJ2Q9NZG7 142 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 ZNHIT2Q9UHR6 403 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 USH1CQ9Y6N9 552 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 TAF1P21675 1872 aa14.57□□□□□ -0.08
ARHGEF39-205ENST00000490638 MEI4A8MW99 385 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms