RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 CD82P27701 267 aa14.02□□□□□ -0.17
EXOSC3-207ENST00000490516 RAD23BP54727 409 aa14.02□□□□□ -0.17
EXOSC3-207ENST00000490516 DAOAP59103 153 aa14.02□□□□□ -0.17
EXOSC3-207ENST00000490516 ZFP36L1Q07352 338 aaKnown RBP14.02□□□□□ -0.17
EXOSC3-207ENST00000490516 LACTB2Q53H82 288 aaPredicted RBP14.02□□□□□ -0.17
EXOSC3-207ENST00000490516 ARHGAP17Q68EM7 881 aa14.02□□□□□ -0.17
EXOSC3-207ENST00000490516 CIR1Q86X95 450 aaPredicted RBP14.02□□□□□ -0.17
EXOSC3-207ENST00000490516 PHACTR4Q8IZ21 702 aa14.02□□□□□ -0.17
EXOSC3-207ENST00000490516 SIX6OS1Q8N1H7 587 aa14.02□□□□□ -0.17
EXOSC3-207ENST00000490516 ERCC4Q92889 916 aaPredicted RBP14.02□□□□□ -0.17
EXOSC3-207ENST00000490516 IMPG2Q9BZV3 1241 aa14.02□□□□□ -0.17
EXOSC3-207ENST00000490516 DNAI2Q9GZS0 605 aa14.02□□□□□ -0.17
EXOSC3-207ENST00000490516 CGNQ9P2M7 1197 aaKnown RBP14.02□□□□□ -0.17
EXOSC3-207ENST00000490516 ESPL1Q14674 2120 aa14.02□□□□□ -0.17
EXOSC3-207ENST00000490516 STMND1H3BQB6 276 aa14.01□□□□□ -0.17
EXOSC3-207ENST00000490516 SPTLC2O15270 562 aa14.01□□□□□ -0.17
EXOSC3-207ENST00000490516 VPS4BO75351 444 aa14.01□□□□□ -0.17
EXOSC3-207ENST00000490516 LCP1P13796 627 aa14.01□□□□□ -0.17
EXOSC3-207ENST00000490516 ATP1A2P50993 1020 aa14.01□□□□□ -0.17
EXOSC3-207ENST00000490516 SLC12A1Q13621 1099 aa14.01□□□□□ -0.17
EXOSC3-207ENST00000490516 TCEA2Q15560 299 aa14.01□□□□□ -0.17
EXOSC3-207ENST00000490516 KNOP1Q1ED39 458 aaKnown RBP14.01□□□□□ -0.17
EXOSC3-207ENST00000490516 RAP1GAP2Q684P5 730 aa14.01□□□□□ -0.17
EXOSC3-207ENST00000490516 TMPRSS9Q7Z410 1059 aa14.01□□□□□ -0.17
EXOSC3-207ENST00000490516 ARL10Q8N8L6 244 aa14.01□□□□□ -0.17
EXOSC3-207ENST00000490516 Q8N9G6 341 aaPredicted RBP14.01□□□□□ -0.17
EXOSC3-207ENST00000490516 TAS1R2Q8TE23 839 aa14.01□□□□□ -0.17
EXOSC3-207ENST00000490516 CATSPER2Q96P56 530 aa14.01□□□□□ -0.17
EXOSC3-207ENST00000490516 KLF6Q99612 283 aaPredicted RBP14.01□□□□□ -0.17
EXOSC3-207ENST00000490516 CMKLR1Q99788 373 aa14.01□□□□□ -0.17
EXOSC3-207ENST00000490516 BACH2Q9BYV9 841 aa14.01□□□□□ -0.17
EXOSC3-207ENST00000490516 SLC25A13Q9UJS0 675 aa14.01□□□□□ -0.17
EXOSC3-207ENST00000490516 VPS4AQ9UN37 437 aa14.01□□□□□ -0.17
EXOSC3-207ENST00000490516 F8P00451 2351 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 K7EM74 188 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 PIK3R2O00459 728 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 FPGTO14772 594 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 NKX2-8O15522 239 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 DUX1O43812 170 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 GABBR2O75899 941 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 CD2BP2O95400 341 aaKnown RBP14□□□□□ -0.17
EXOSC3-207ENST00000490516 CLDN1O95832 211 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 CCL4P13236 92 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 CHRNA3P32297 505 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 ARSDP51689 593 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 PLK1P53350 603 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 CCDC15Q0P6D6 951 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 ERN2Q76MJ5 926 aaKnown RBP14□□□□□ -0.17
EXOSC3-207ENST00000490516 MAMDC2Q7Z304 686 aaPredicted RBP14□□□□□ -0.17
EXOSC3-207ENST00000490516 BRAPQ7Z569 592 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 IL22RA1Q8N6P7 574 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 PCDH19Q8TAB3 1148 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 UBA3Q8TBC4 463 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 TMC2Q8TDI7 906 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 PMEPA1Q969W9 287 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 TMEM159Q96B96 161 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 TNMDQ9H2S6 317 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 SLC39A2Q9NP94 309 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 DYRK4Q9NR20 520 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 CISHQ9NSE2 258 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 KBTBD4Q9NVX7 518 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 DMAC2Q9NW81 257 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 TSPAN16Q9UKR8 245 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 TP53TG5Q9Y2B4 290 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 RNF215Q9Y6U7 377 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 LRP4O75096 1905 aa14□□□□□ -0.17
EXOSC3-207ENST00000490516 ZNF891A8MT65 544 aaPredicted RBP13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 IKBKBO14920 756 aa13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 PRKAR1AP10644 381 aa13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 TACR2P21452 398 aa13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 VASPP50552 380 aaPredicted RBP13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 PFN3P60673 137 aa13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 RPS21P63220 83 aaKnown RBP13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 BST2Q10589 180 aaKnown RBP13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 C16orf72Q14CZ0 275 aa13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 PHF19Q5T6S3 580 aa13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 FAXCQ5TGI0 409 aa13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 TMEM164Q5U3C3 297 aa13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 CXorf57Q6NSI4 855 aaKnown RBP13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 CHSY1Q86X52 802 aa13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 CCNJLQ8IV13 435 aa13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 CCAR2Q8N163 923 aaKnown RBP13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 SH2D3CQ8N5H7 860 aa13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 TMIEQ8NEW7 156 aa13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 OR52K2Q8NGK3 314 aa13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 OR2A12Q8NGT7 310 aa13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 GRIN3AQ8TCU5 1115 aa13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 CLEC4CQ8WTT0 213 aa13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 RNF34Q969K3 372 aa13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 ALG14Q96F25 216 aa13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 SRRTQ9BXP5 876 aaKnown RBP13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 SLC13A1Q9BZW2 595 aa13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 CNGB3Q9NQW8 809 aa13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 FOXD4L1Q9NU39 408 aa13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 DOLKQ9UPQ8 538 aa13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 NAALADL1Q9UQQ1 740 aa13.99□□□□□ -0.17
EXOSC3-207ENST00000490516 SHANK1Q9Y566 2161 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 ZNF106Q9H2Y7 1883 aaKnown RBP13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 HIVEP3Q5T1R4 2406 aa13.98□□□□□ -0.17
EXOSC3-207ENST00000490516 LTFP02788 710 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms