RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 TBC1D3KA0A087X1G2 549 aa20.16■□□□□ 0.82
SMC4-222ENST00000490207 TBC1D3FA6NER0 549 aaPredicted RBP20.16■□□□□ 0.82
SMC4-222ENST00000490207 TBC1D3LB9A6J9 549 aa20.16■□□□□ 0.82
SMC4-222ENST00000490207 KPNA3O00505 521 aaPredicted RBP20.16■□□□□ 0.82
SMC4-222ENST00000490207 CREB3O43889 395 aa20.16■□□□□ 0.82
SMC4-222ENST00000490207 FTLP02792 175 aaPredicted RBP20.16■□□□□ 0.82
SMC4-222ENST00000490207 PRNPP04156 253 aa20.16■□□□□ 0.82
SMC4-222ENST00000490207 TBC1D3HP0C7X1 549 aa20.16■□□□□ 0.82
SMC4-222ENST00000490207 EPHB2P29323 1055 aa20.16■□□□□ 0.82
SMC4-222ENST00000490207 RACK1P63244 317 aaKnown RBP20.16■□□□□ 0.82
SMC4-222ENST00000490207 KIF19Q2TAC6 998 aa20.16■□□□□ 0.82
SMC4-222ENST00000490207 HLA-BQ31612 363 aa20.16■□□□□ 0.82
SMC4-222ENST00000490207 TBC1D3GQ6DHY5 549 aa20.16■□□□□ 0.82
SMC4-222ENST00000490207 TBC1D3CQ6IPX1 549 aa20.16■□□□□ 0.82
SMC4-222ENST00000490207 TBC1D3Q8IZP1 549 aaPredicted RBP20.16■□□□□ 0.82
SMC4-222ENST00000490207 RTL3Q8N8U3 475 aaKnown RBP20.16■□□□□ 0.82
SMC4-222ENST00000490207 TMIEQ8NEW7 156 aa20.16■□□□□ 0.82
SMC4-222ENST00000490207 IQCDQ96DY2 449 aa20.16■□□□□ 0.82
SMC4-222ENST00000490207 TRIM11Q96F44 468 aa20.16■□□□□ 0.82
SMC4-222ENST00000490207 MAGEH1Q9H213 219 aa20.16■□□□□ 0.82
SMC4-222ENST00000490207 EBF2Q9HAK2 575 aa20.16■□□□□ 0.82
SMC4-222ENST00000490207 DYRK4Q9NR20 520 aa20.16■□□□□ 0.82
SMC4-222ENST00000490207 IFNKQ9P0W0 207 aa20.16■□□□□ 0.82
SMC4-222ENST00000490207 CNOT8Q9UFF9 292 aaKnown RBP20.16■□□□□ 0.82
SMC4-222ENST00000490207 ANKRD6Q9Y2G4 727 aa20.16■□□□□ 0.82
SMC4-222ENST00000490207 FNDC3AQ9Y2H6 1198 aaKnown RBP20.16■□□□□ 0.82
SMC4-222ENST00000490207 FCF1Q9Y324 198 aaKnown RBP20.16■□□□□ 0.82
SMC4-222ENST00000490207 SNX11Q9Y5W9 270 aa20.16■□□□□ 0.82
SMC4-222ENST00000490207 ACTL7AQ9Y615 435 aa20.16■□□□□ 0.82
SMC4-222ENST00000490207 SCINQ9Y6U3 715 aa20.16■□□□□ 0.82
SMC4-222ENST00000490207 CXorf51AA0A1B0GTR3 108 aa20.15■□□□□ 0.82
SMC4-222ENST00000490207 ZNF821O75541 412 aaPredicted RBP20.15■□□□□ 0.82
SMC4-222ENST00000490207 ZNF883P0CG24 379 aa20.15■□□□□ 0.82
SMC4-222ENST00000490207 C21orf59P57076 290 aa20.15■□□□□ 0.82
SMC4-222ENST00000490207 GEMIN4P57678 1058 aaKnown RBP20.15■□□□□ 0.82
SMC4-222ENST00000490207 POLD3Q15054 466 aaPredicted RBP20.15■□□□□ 0.82
SMC4-222ENST00000490207 PIP5KL1Q5T9C9 394 aa20.15■□□□□ 0.82
SMC4-222ENST00000490207 DPY19L3Q6ZPD9 716 aa20.15■□□□□ 0.82
SMC4-222ENST00000490207 NAXDQ8IW45 347 aa20.15■□□□□ 0.82
SMC4-222ENST00000490207 ARRDC3Q96B67 414 aa20.15■□□□□ 0.82
SMC4-222ENST00000490207 CATSPERBQ9H7T0 1116 aa20.15■□□□□ 0.82
SMC4-222ENST00000490207 AASDHPPTQ9NRN7 309 aa20.15■□□□□ 0.82
SMC4-222ENST00000490207 TM7SF3Q9NS93 570 aa20.15■□□□□ 0.82
SMC4-222ENST00000490207 HPCAL4Q9UM19 191 aa20.15■□□□□ 0.82
SMC4-222ENST00000490207 LATO43561 262 aa20.14■□□□□ 0.81
SMC4-222ENST00000490207 SH3BP5O60239 455 aa20.14■□□□□ 0.81
SMC4-222ENST00000490207 CD160O95971 181 aa20.14■□□□□ 0.81
SMC4-222ENST00000490207 MYBL1P10243 752 aa20.14■□□□□ 0.81
SMC4-222ENST00000490207 DNA2P51530 1060 aa20.14■□□□□ 0.81
SMC4-222ENST00000490207 TPI1P60174 286 aa20.14■□□□□ 0.81
SMC4-222ENST00000490207 ZBED6P86452 979 aa20.14■□□□□ 0.81
SMC4-222ENST00000490207 ARSIQ5FYB1 569 aa20.14■□□□□ 0.81
SMC4-222ENST00000490207 HGSNATQ68CP4 663 aa20.14■□□□□ 0.81
SMC4-222ENST00000490207 PRPF39Q86UA1 669 aaKnown RBP20.14■□□□□ 0.81
SMC4-222ENST00000490207 TRIM69Q86WT6 500 aa20.14■□□□□ 0.81
SMC4-222ENST00000490207 ZNF354CQ86Y25 554 aa20.14■□□□□ 0.81
SMC4-222ENST00000490207 FNIP1Q8TF40 1166 aa20.14■□□□□ 0.81
SMC4-222ENST00000490207 SYN2Q92777 582 aaPredicted RBP20.14■□□□□ 0.81
SMC4-222ENST00000490207 PPP1R16AQ96I34 528 aa20.14■□□□□ 0.81
SMC4-222ENST00000490207 PREBQ9HCU5 417 aa20.14■□□□□ 0.81
SMC4-222ENST00000490207 GPATCH2LQ9NWQ4 482 aa20.14■□□□□ 0.81
SMC4-222ENST00000490207 MYO1AQ9UBC5 1043 aa20.14■□□□□ 0.81
SMC4-222ENST00000490207 ANGPTL2Q9UKU9 493 aa20.14■□□□□ 0.81
SMC4-222ENST00000490207 AP4E1Q9UPM8 1137 aa20.14■□□□□ 0.81
SMC4-222ENST00000490207 BZW2Q9Y6E2 419 aaKnown RBP20.14■□□□□ 0.81
SMC4-222ENST00000490207 WASF2Q9Y6W5 498 aa20.14■□□□□ 0.81
SMC4-222ENST00000490207 SPAARA0A1B0GVQ0 90 aa20.13■□□□□ 0.81
SMC4-222ENST00000490207 TMEM191CA6NGB0 347 aa20.13■□□□□ 0.81
SMC4-222ENST00000490207 VILLO15195 856 aa20.13■□□□□ 0.81
SMC4-222ENST00000490207 FGF10O15520 208 aaPredicted RBP20.13■□□□□ 0.81
SMC4-222ENST00000490207 LEFTY1O75610 366 aa20.13■□□□□ 0.81
SMC4-222ENST00000490207 CTSKP43235 329 aa20.13■□□□□ 0.81
SMC4-222ENST00000490207 CCNHP51946 323 aaPredicted RBP20.13■□□□□ 0.81
SMC4-222ENST00000490207 CCDC15Q0P6D6 951 aa20.13■□□□□ 0.81
SMC4-222ENST00000490207 FOXC1Q12948 553 aa20.13■□□□□ 0.81
SMC4-222ENST00000490207 HNRNPDQ14103 355 aaKnown RBP20.13■□□□□ 0.81
SMC4-222ENST00000490207 CARD16Q5EG05 197 aa20.13■□□□□ 0.81
SMC4-222ENST00000490207 VPS36Q86VN1 386 aa20.13■□□□□ 0.81
SMC4-222ENST00000490207 CPLX3Q8WVH0 158 aa20.13■□□□□ 0.81
SMC4-222ENST00000490207 ISG20Q96AZ6 181 aaKnown RBP20.13■□□□□ 0.81
SMC4-222ENST00000490207 SKA1Q96BD8 255 aa20.13■□□□□ 0.81
SMC4-222ENST00000490207 SERAC1Q96JX3 654 aa20.13■□□□□ 0.81
SMC4-222ENST00000490207 CAMK1GQ96NX5 476 aa20.13■□□□□ 0.81
SMC4-222ENST00000490207 HEPHQ9BQS7 1158 aa20.13■□□□□ 0.81
SMC4-222ENST00000490207 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.13■□□□□ 0.81
SMC4-222ENST00000490207 TM6SF2Q9BZW4 377 aa20.13■□□□□ 0.81
SMC4-222ENST00000490207 TRIM7Q9C029 511 aa20.13■□□□□ 0.81
SMC4-222ENST00000490207 ISCUQ9H1K1 167 aa20.13■□□□□ 0.81
SMC4-222ENST00000490207 CAPN11Q9UMQ6 739 aa20.13■□□□□ 0.81
SMC4-222ENST00000490207 DOCK9Q9BZ29 2069 aa20.12■□□□□ 0.81
SMC4-222ENST00000490207 ZSCAN5CA6NGD5 496 aaPredicted RBP20.12■□□□□ 0.81
SMC4-222ENST00000490207 WASH4PA8MWX3 477 aa20.12■□□□□ 0.81
SMC4-222ENST00000490207 RNF103O00237 685 aa20.12■□□□□ 0.81
SMC4-222ENST00000490207 KDELR3O43731 214 aa20.12■□□□□ 0.81
SMC4-222ENST00000490207 RNF8O76064 485 aa20.12■□□□□ 0.81
SMC4-222ENST00000490207 WNT1P04628 370 aa20.12■□□□□ 0.81
SMC4-222ENST00000490207 GYPCP04921 128 aa20.12■□□□□ 0.81
SMC4-222ENST00000490207 SERPING1P05155 500 aa20.12■□□□□ 0.81
SMC4-222ENST00000490207 TPM3P06753 285 aa20.12■□□□□ 0.81
SMC4-222ENST00000490207 CD38P28907 300 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms