RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 GBE1Q04446 702 aa17.77■□□□□ 0.44
ERCC3-207ENST00000490062 SLC10A2Q12908 348 aaPredicted RBP17.77■□□□□ 0.44
ERCC3-207ENST00000490062 LINGO4Q6UY18 593 aa17.77■□□□□ 0.44
ERCC3-207ENST00000490062 BZW1Q7L1Q6 419 aaKnown RBP17.77■□□□□ 0.44
ERCC3-207ENST00000490062 OR2A12Q8NGT7 310 aa17.77■□□□□ 0.44
ERCC3-207ENST00000490062 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.77■□□□□ 0.44
ERCC3-207ENST00000490062 CCDC114Q96M63 670 aa17.77■□□□□ 0.44
ERCC3-207ENST00000490062 FAM129BQ96TA1 746 aa17.77■□□□□ 0.44
ERCC3-207ENST00000490062 BRD8Q9H0E9 1235 aa17.77■□□□□ 0.44
ERCC3-207ENST00000490062 UBA2Q9UBT2 640 aaPredicted RBP17.77■□□□□ 0.44
ERCC3-207ENST00000490062 PYCARDQ9ULZ3 195 aa17.77■□□□□ 0.44
ERCC3-207ENST00000490062 SCML1Q9UN30 329 aa17.77■□□□□ 0.44
ERCC3-207ENST00000490062 MUC6Q6W4X9 2439 aa17.77■□□□□ 0.43
ERCC3-207ENST00000490062 J3KR12 359 aa17.76■□□□□ 0.43
ERCC3-207ENST00000490062 DFFAO00273 331 aa17.76■□□□□ 0.43
ERCC3-207ENST00000490062 AXIN1O15169 862 aa17.76■□□□□ 0.43
ERCC3-207ENST00000490062 ZBTB24O43167 697 aaPredicted RBP17.76■□□□□ 0.43
ERCC3-207ENST00000490062 TMCC1O94876 653 aa17.76■□□□□ 0.43
ERCC3-207ENST00000490062 PYGMP11217 842 aa17.76■□□□□ 0.43
ERCC3-207ENST00000490062 CCNCP24863 283 aa17.76■□□□□ 0.43
ERCC3-207ENST00000490062 CETN2P41208 172 aa17.76■□□□□ 0.43
ERCC3-207ENST00000490062 TSSK4Q6SA08 328 aa17.76■□□□□ 0.43
ERCC3-207ENST00000490062 RFX6Q8HWS3 928 aa17.76■□□□□ 0.43
ERCC3-207ENST00000490062 TMPRSS6Q8IU80 811 aa17.76■□□□□ 0.43
ERCC3-207ENST00000490062 ATPAF2Q8N5M1 289 aa17.76■□□□□ 0.43
ERCC3-207ENST00000490062 TEX26Q8N6G2 289 aa17.76■□□□□ 0.43
ERCC3-207ENST00000490062 ZNF366Q8N895 744 aa17.76■□□□□ 0.43
ERCC3-207ENST00000490062 MAML1Q92585 1016 aa17.76■□□□□ 0.43
ERCC3-207ENST00000490062 FAM131CQ96AQ9 280 aa17.76■□□□□ 0.43
ERCC3-207ENST00000490062 OSBPL8Q9BZF1 889 aa17.76■□□□□ 0.43
ERCC3-207ENST00000490062 CARD9Q9H257 536 aa17.76■□□□□ 0.43
ERCC3-207ENST00000490062 SP110Q9HB58 689 aa17.76■□□□□ 0.43
ERCC3-207ENST00000490062 USP36Q9P275 1121 aaKnown RBP17.76■□□□□ 0.43
ERCC3-207ENST00000490062 AMACRQ9UHK6 382 aa17.76■□□□□ 0.43
ERCC3-207ENST00000490062 EML5Q05BV3 1969 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 APOC4-APOC2K7ER74 178 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 CST8O60676 142 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 ZNF217O75362 1048 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 APOC2P02655 101 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 HSPA9P38646 679 aaKnown RBP17.75■□□□□ 0.43
ERCC3-207ENST00000490062 CSNK1DP48730 415 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 ADCY2Q08462 1091 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 PPIDQ08752 370 aaKnown RBP17.75■□□□□ 0.43
ERCC3-207ENST00000490062 NSUN2Q08J23 767 aaKnown RBP eCLIP17.75■□□□□ 0.43
ERCC3-207ENST00000490062 DMWDQ09019 674 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 HNRNPDQ14103 355 aaKnown RBP17.75■□□□□ 0.43
ERCC3-207ENST00000490062 CYTH1Q15438 398 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 CARD16Q5EG05 197 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 DCAF12L1Q5VU92 463 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 ZNF776Q68DI1 518 aaPredicted RBP17.75■□□□□ 0.43
ERCC3-207ENST00000490062 ANO7Q6IWH7 933 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 TIGD7Q6NT04 549 aaPredicted RBP17.75■□□□□ 0.43
ERCC3-207ENST00000490062 ARHGAP36Q6ZRI8 547 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 Q6ZVU0 165 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 DSG4Q86SJ6 1040 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 ZNF354CQ86Y25 554 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 TMIEQ8NEW7 156 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 OR2AP1Q8NGE2 309 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 OR8D1Q8WZ84 308 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 VOPP1Q96AW1 172 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 LRIG1Q96JA1 1093 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 PSKH2Q96QS6 385 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 TLR10Q9BXR5 811 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 MTG2Q9H4K7 406 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 PPM1HQ9ULR3 514 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 PACSIN2Q9UNF0 486 aaPredicted RBP17.75■□□□□ 0.43
ERCC3-207ENST00000490062 FCF1Q9Y324 198 aaKnown RBP17.75■□□□□ 0.43
ERCC3-207ENST00000490062 HCN4Q9Y3Q4 1203 aa17.75■□□□□ 0.43
ERCC3-207ENST00000490062 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.75■□□□□ 0.43
ERCC3-207ENST00000490062 RNASEH1O60930 286 aaKnown RBP17.74■□□□□ 0.43
ERCC3-207ENST00000490062 KRT10P13645 584 aa17.74■□□□□ 0.43
ERCC3-207ENST00000490062 VAV1P15498 845 aa17.74■□□□□ 0.43
ERCC3-207ENST00000490062 P2RY2P41231 377 aa17.74■□□□□ 0.43
ERCC3-207ENST00000490062 NUMBP49757 651 aa17.74■□□□□ 0.43
ERCC3-207ENST00000490062 RPS14P62263 151 aaKnown RBP17.74■□□□□ 0.43
ERCC3-207ENST00000490062 SNRPD1P62314 119 aaKnown RBP17.74■□□□□ 0.43
ERCC3-207ENST00000490062 KLF1Q13351 362 aaPredicted RBP17.74■□□□□ 0.43
ERCC3-207ENST00000490062 BYSLQ13895 437 aaKnown RBP17.74■□□□□ 0.43
ERCC3-207ENST00000490062 PDK1Q15118 436 aa17.74■□□□□ 0.43
ERCC3-207ENST00000490062 RPS6KA1Q15418 735 aa17.74■□□□□ 0.43
ERCC3-207ENST00000490062 ACCSLQ4AC99 568 aa17.74■□□□□ 0.43
ERCC3-207ENST00000490062 CCDC50Q8IVM0 306 aa17.74■□□□□ 0.43
ERCC3-207ENST00000490062 HMGB4Q8WW32 186 aa17.74■□□□□ 0.43
ERCC3-207ENST00000490062 PRCCQ92733 491 aaPredicted RBP17.74■□□□□ 0.43
ERCC3-207ENST00000490062 SIPA1Q96FS4 1042 aa17.74■□□□□ 0.43
ERCC3-207ENST00000490062 ITM2CQ9NQX7 267 aa17.74■□□□□ 0.43
ERCC3-207ENST00000490062 LHX3Q9UBR4 397 aa17.74■□□□□ 0.43
ERCC3-207ENST00000490062 SEPT3Q9UH03 358 aa17.74■□□□□ 0.43
ERCC3-207ENST00000490062 JRKLQ9Y4A0 524 aa17.74■□□□□ 0.43
ERCC3-207ENST00000490062 FARP1Q9Y4F1 1045 aaPredicted RBP17.74■□□□□ 0.43
ERCC3-207ENST00000490062 ACTL7AQ9Y615 435 aa17.74■□□□□ 0.43
ERCC3-207ENST00000490062 PPP1R12AO14974 1030 aaPredicted RBP17.73■□□□□ 0.43
ERCC3-207ENST00000490062 MATN3O15232 486 aa17.73■□□□□ 0.43
ERCC3-207ENST00000490062 TJP3O95049 919 aa17.73■□□□□ 0.43
ERCC3-207ENST00000490062 ADH1BP00325 375 aa17.73■□□□□ 0.43
ERCC3-207ENST00000490062 MSNP26038 577 aaKnown RBP17.73■□□□□ 0.43
ERCC3-207ENST00000490062 FNTBP49356 437 aa17.73■□□□□ 0.43
ERCC3-207ENST00000490062 RENBPP51606 427 aa17.73■□□□□ 0.43
ERCC3-207ENST00000490062 XRCC4Q13426 336 aa17.73■□□□□ 0.43
ERCC3-207ENST00000490062 LBRQ14739 615 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms