RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-206	ENST00000489853	EAF1	Q96JC9	268 aa	Predicted RBP	4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	GLT1D1	Q96MS3	346 aa		4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	MECR	Q9BV79	373 aa		4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	SEZ6L	Q9BYH1	1024 aa		4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	C20orf27	Q9GZN8	174 aa		4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	MKRN2	Q9H000	416 aa	Known RBP	4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	ZHX3	Q9H4I2	956 aa		4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	SLA2	Q9H6Q3	261 aa		4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	NOL6	Q9H6R4	1146 aa	Known RBP	4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	ATP13A3	Q9H7F0	1226 aa		4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	PCDH9	Q9HC56	1237 aa		4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	PNPLA8	Q9NP80	782 aa		4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	UBE2T	Q9NPD8	197 aa	Predicted RBP	4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	IL17RB	Q9NRM6	502 aa		4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	DUS2	Q9NX74	493 aa	Known RBP	4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	ABI2	Q9NYB9	513 aa	Predicted RBP	4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	NPAP1	Q9NZP6	1156 aa		4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	GMIP	Q9P107	970 aa		4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	TXNDC16	Q9P2K2	825 aa		4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	ATPIF1	Q9UII2	106 aa		4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	SERPINB13	Q9UIV8	391 aa		4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	ENPP5	Q9UJA9	477 aa		4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	NOCT	Q9UK39	431 aa	Known RBP	4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	TLR6	Q9Y2C9	796 aa		4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	WBP11	Q9Y2W2	641 aa	Known RBP	4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	PCDHGA8	Q9Y5G5	932 aa		4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	USP54	Q70EL1	1684 aa		4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	ADAMTS7	Q9UKP4	1686 aa		4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	SLIT2	O94813	1529 aa		4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	ATRNL1	Q5VV63	1379 aa		4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	LRP5	O75197	1615 aa		4.84	□□□□□ -1.63
SNRNP40-206	ENST00000489853	ASTN1	O14525	1302 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	SPATA31A5	Q5VU36	1347 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	SPATA31A7	Q8IWB4	1347 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	DUOX1	Q9NRD9	1551 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	CYP2D7	A0A087X1C5	515 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	FAM25A	B3EWG3	89 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	FAM25C	B3EWG5	89 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	FAM25G	B3EWG6	89 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	SMIM22	K7EJ46	135 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	ENPP3	O14638	875 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	AIM2	O14862	343 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	CLIC2	O15247	247 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	SLC37A4	O43826	429 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	SNX2	O60749	519 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	SGPL1	O95470	568 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	CPNE6	O95741	557 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	ITGAV	P06756	1048 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	WEE2	P0C1S8	567 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	ZSCAN5DP	P0CG00	497 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	TIMP2	P16035	220 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	PTPN1	P18031	435 aa	Known RBP	4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	RPL17	P18621	184 aa	Known RBP	4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	MATN1	P21941	496 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	TBXAS1	P24557	533 aa	Predicted RBP	4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	SLC7A1	P30825	629 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	GRIA3	P42263	894 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	CASP3	P42574	277 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	SLC1A6	P48664	564 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	NUMB	P49757	651 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	ST13	P50502	369 aa	Known RBP	4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	HLCS	P50747	726 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	AP2S1	P53680	142 aa	Predicted RBP	4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	PRKAA2	P54646	552 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	SLC12A3	P55017	1021 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	PRAME	P78395	509 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	GALK2	Q01415	458 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	MYL7	Q01449	175 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	CETN1	Q12798	172 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	ILF2	Q12905	390 aa	Known RBP	4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	NAB1	Q13506	487 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	SERINC3	Q13530	473 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	CEACAM7	Q14002	265 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	RFTN1	Q14699	578 aa	Predicted RBP	4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	POU6F1	Q14863	301 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	UBE2S	Q16763	222 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	SLC35G1	Q2M3R5	365 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	ANO4	Q32M45	955 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	FAM47A	Q5JRC9	791 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	FNBP1L	Q5T0N5	605 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	SLFN13	Q68D06	897 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	NEK5	Q6P3R8	708 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	ABRAXAS1	Q6UWZ7	409 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	UNC5A	Q6ZN44	842 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	CAMK1D	Q8IU85	385 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	RHOT1	Q8IXI2	618 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	FAM71A	Q8IYT1	594 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	PGAM4	Q8N0Y7	254 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	REXO1	Q8N1G1	1221 aa	Known RBP	4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	ZCCHC7	Q8N3Z6	543 aa	Known RBP	4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	MARCH10	Q8NA82	808 aa	Predicted RBP	4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	GLIS1	Q8NBF1	620 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	FBXO36	Q8NEA4	188 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	RP9	Q8TA86	221 aa	Known RBP	4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	NKD2	Q969F2	451 aa	Predicted RBP	4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	MAGED4	Q96JG8	741 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	BTN2A3P	Q96KV6	586 aa		4.84	□□□□□ -1.64
SNRNP40-206	ENST00000489853	ZNF560	Q96MR9	790 aa		4.84	□□□□□ -1.64

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