RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 NCKAP1Q9Y2A7 1128 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 PCDHGA5Q9Y5G8 931 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 ADGRG1Q9Y653 693 aa11.29□□□□□ -0.6
CPSF7-212ENST00000489728 CCDC66A2RUB6 948 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 LRRD1A4D1F6 860 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 C3orf70A6NLC5 250 aaPredicted RBP11.28□□□□□ -0.6
CPSF7-212ENST00000489728 K7ERQ8 282 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 SMAD6O43541 496 aaKnown RBP11.28□□□□□ -0.6
CPSF7-212ENST00000489728 KRT86O43790 486 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 FOXD2O60548 495 aaPredicted RBP11.28□□□□□ -0.6
CPSF7-212ENST00000489728 ZNF821O75541 412 aaPredicted RBP11.28□□□□□ -0.6
CPSF7-212ENST00000489728 TMCC1O94876 653 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 KRT1P04264 644 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 RETP07949 1114 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 CD48P09326 243 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 MX2P20592 715 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 AMPD1P23109 780 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 CTNNA1P35221 906 aaKnown RBP11.28□□□□□ -0.6
CPSF7-212ENST00000489728 HOXD12P35452 270 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 GJC1P36383 396 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 HSPA9P38646 679 aaKnown RBP11.28□□□□□ -0.6
CPSF7-212ENST00000489728 COPS2P61201 443 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 SNRPD1P62314 119 aaKnown RBP11.28□□□□□ -0.6
CPSF7-212ENST00000489728 CCZ1BP86790 482 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 CCZ1P86791 482 aaPredicted RBP11.28□□□□□ -0.6
CPSF7-212ENST00000489728 ZNF33AQ06730 810 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 SRSF5Q13243 272 aaKnown RBP11.28□□□□□ -0.6
CPSF7-212ENST00000489728 GRM3Q14832 879 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 TAZQ16635 292 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 ATP13A4Q4VNC1 1196 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 CARD16Q5EG05 197 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 ZFYVE27Q5T4F4 411 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 NCBP2-AS2Q69YL0 99 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 PRR23BQ6ZRT6 265 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 STK40Q8N2I9 435 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 FAM160A2Q8N612 972 aaPredicted RBP11.28□□□□□ -0.6
CPSF7-212ENST00000489728 GPR161Q8N6U8 529 aaKnown RBP11.28□□□□□ -0.6
CPSF7-212ENST00000489728 LRRC57Q8N9N7 239 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 OR2AP1Q8NGE2 309 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 EXD1Q8NHP7 514 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 PCDH19Q8TAB3 1148 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 KIAA1524Q8TCG1 905 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 RAPGEF5Q92565 580 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 RUBCNQ92622 972 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 FOXJ1Q92949 421 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 PPP1R16AQ96I34 528 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 RBM41Q96IZ5 413 aaKnown RBP11.28□□□□□ -0.6
CPSF7-212ENST00000489728 PDLIM2Q96JY6 352 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 GDAP1L1Q96MZ0 367 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 RNF157Q96PX1 679 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 DESI2Q9BSY9 194 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 OSBPL1AQ9BXW6 950 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 SLC39A8Q9C0K1 460 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 KDM4CQ9H3R0 1056 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 SP110Q9HB58 689 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 SGK2Q9HBY8 427 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 HAUS2Q9NVX0 235 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 WSB2Q9NYS7 404 aaPredicted RBP11.28□□□□□ -0.6
CPSF7-212ENST00000489728 IPO11Q9UI26 975 aaKnown RBP11.28□□□□□ -0.6
CPSF7-212ENST00000489728 GMEB2Q9UKD1 530 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 MFHAS1Q9Y4C4 1052 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 SPAG17Q6Q759 2223 aa11.28□□□□□ -0.6
CPSF7-212ENST00000489728 MIF4GDA9UHW6 222 aaKnown RBP11.27□□□□□ -0.61
CPSF7-212ENST00000489728 DFFAO00273 331 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 MAP3K13O43283 966 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 NDUFS2O75306 463 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 EPN2O95208 641 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 IGSF6O95976 241 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 IL1BP01584 269 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 VAV1P15498 845 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 CTNNA2P26232 953 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 CHRNA3P32297 505 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 SLC8A1P32418 973 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 MAPK8P45983 427 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 CSNK1DP48730 415 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 NAP1L1P55209 391 aaKnown RBP11.27□□□□□ -0.61
CPSF7-212ENST00000489728 RHOAP61586 193 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 RAD51Q06609 339 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 GALNT2Q10471 571 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 MMRN1Q13201 1228 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 TFDP2Q14188 446 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 PPP2R5EQ16537 467 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 TFDP3Q5H9I0 405 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 SLC9A4Q6AI14 798 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 TIGD7Q6NT04 549 aaPredicted RBP11.27□□□□□ -0.61
CPSF7-212ENST00000489728 RABEPKQ7Z6M1 372 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 MMAAQ8IVH4 418 aaKnown RBP11.27□□□□□ -0.61
CPSF7-212ENST00000489728 RCOR2Q8IZ40 523 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 ATPAF2Q8N5M1 289 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.27□□□□□ -0.61
CPSF7-212ENST00000489728 RLN3Q8WXF3 142 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 CELF6Q96J87 481 aaKnown RBP11.27□□□□□ -0.61
CPSF7-212ENST00000489728 ZNF830Q96NB3 372 aaPredicted RBP11.27□□□□□ -0.61
CPSF7-212ENST00000489728 TSGA13Q96PP4 275 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 HEPHQ9BQS7 1158 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 BTBD1Q9H0C5 482 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 SLC6A17Q9H1V8 727 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 MTG2Q9H4K7 406 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 ETNK2Q9NVF9 386 aa11.27□□□□□ -0.61
CPSF7-212ENST00000489728 IL36AQ9UHA7 158 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms