RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 ZNF354CQ86Y25 554 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 PGBD5Q8N414 524 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 CNTD1Q8N815 330 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 CCNYQ8ND76 341 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 SPATA4Q8NEY3 305 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 FRS2Q8WU20 508 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 HTR3CQ8WXA8 447 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 EDAQ92838 391 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 EXOC4Q96A65 974 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 SHDQ96IW2 340 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 RPL10LQ96L21 214 aaKnown RBP11.1□□□□□ -0.63
TFF3-203ENST00000489676 PSKH2Q96QS6 385 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 TMEM121Q9BTD3 319 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 FOXQ1Q9C009 403 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 DDX47Q9H0S4 455 aaKnown RBP11.1□□□□□ -0.63
TFF3-203ENST00000489676 TMEM245Q9H330 911 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 TBC1D17Q9HA65 648 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 SLCO3A1Q9UIG8 710 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 SLC25A13Q9UJS0 675 aa11.1□□□□□ -0.63
TFF3-203ENST00000489676 GOLGA6L10A0A0M3HER8 536 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 CFAP69A5D8W1 941 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 CCDC188H7C350 402 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 RNF103O00237 685 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 NPC1O15118 1278 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 KCNN4O15554 427 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 MTSS1O43312 755 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 RNF40O75150 1001 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 ZNF189O75820 626 aaPredicted RBP11.09□□□□□ -0.63
TFF3-203ENST00000489676 CCNB1P14635 433 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 CR2P20023 1033 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 PRKCHP24723 683 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 COILP38432 576 aaPredicted RBP11.09□□□□□ -0.63
TFF3-203ENST00000489676 IL12RB1P42701 662 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 RGRP47804 291 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 KCNJ1P48048 391 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 CKAP4Q07065 602 aaKnown RBP11.09□□□□□ -0.63
TFF3-203ENST00000489676 LBRQ14739 615 aaKnown RBP11.09□□□□□ -0.63
TFF3-203ENST00000489676 CYTH1Q15438 398 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 FBXO43Q4G163 708 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 DGKKQ5KSL6 1271 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 FAM182AQ5T1J6 154 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 CWF19L1Q69YN2 538 aaKnown RBP11.09□□□□□ -0.63
TFF3-203ENST00000489676 DARS2Q6PI48 645 aaKnown RBP11.09□□□□□ -0.63
TFF3-203ENST00000489676 Q6ZS52 159 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 NUDT18Q6ZVK8 323 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 CCDC105Q8IYK2 499 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 ALLCQ8N6M5 410 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 ZNF513Q8N8E2 541 aaPredicted RBP11.09□□□□□ -0.63
TFF3-203ENST00000489676 IL17RCQ8NAC3 791 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 GLIS1Q8NBF1 620 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 KCNV2Q8TDN2 545 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 USP33Q8TEY7 942 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 UCMAQ8WVF2 138 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 SLCO2A1Q92959 643 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 MAGOHBQ96A72 148 aaKnown RBP11.09□□□□□ -0.63
TFF3-203ENST00000489676 ISG20Q96AZ6 181 aaKnown RBP11.09□□□□□ -0.63
TFF3-203ENST00000489676 ACOX2Q99424 681 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 MGME1Q9BQP7 344 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 CEP41Q9BYV8 373 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 OSBPL6Q9BZF3 934 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 CEP44Q9C0F1 390 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 CD248Q9HCU0 757 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 ZDHHC4Q9NPG8 344 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 CACNA2D2Q9NY47 1150 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 AMACRQ9UHK6 382 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 NDRG2Q9UN36 371 aaKnown RBP11.09□□□□□ -0.63
TFF3-203ENST00000489676 DRG1Q9Y295 367 aaKnown RBP11.09□□□□□ -0.63
TFF3-203ENST00000489676 FCF1Q9Y324 198 aaKnown RBP11.09□□□□□ -0.63
TFF3-203ENST00000489676 NEU2Q9Y3R4 380 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 MTF2Q9Y483 593 aaPredicted RBP11.09□□□□□ -0.63
TFF3-203ENST00000489676 ZDBF2Q9HCK1 2354 aa11.09□□□□□ -0.63
TFF3-203ENST00000489676 C5orf60A6NFR6 353 aa11.08□□□□□ -0.64
TFF3-203ENST00000489676 TTC34A8MYJ7 566 aa11.08□□□□□ -0.64
TFF3-203ENST00000489676 ADAM23O75077 832 aa11.08□□□□□ -0.64
TFF3-203ENST00000489676 HLA-DQB2P05538 268 aa11.08□□□□□ -0.64
TFF3-203ENST00000489676 CHRNA3P32297 505 aa11.08□□□□□ -0.64
TFF3-203ENST00000489676 CD68P34810 354 aaPredicted RBP11.08□□□□□ -0.64
TFF3-203ENST00000489676 MMP13P45452 471 aa11.08□□□□□ -0.64
TFF3-203ENST00000489676 RENBPP51606 427 aa11.08□□□□□ -0.64
TFF3-203ENST00000489676 SEC13P55735 322 aa11.08□□□□□ -0.64
TFF3-203ENST00000489676 MRPS21P82921 87 aaKnown RBP11.08□□□□□ -0.64
TFF3-203ENST00000489676 C2orf54Q08AI8 447 aa11.08□□□□□ -0.64
TFF3-203ENST00000489676 DLG2Q15700 870 aa11.08□□□□□ -0.64
TFF3-203ENST00000489676 HNRNPA1L2Q32P51 320 aaKnown RBP11.08□□□□□ -0.64
TFF3-203ENST00000489676 TEX44Q53QW1 395 aa11.08□□□□□ -0.64
TFF3-203ENST00000489676 MARC1Q5VT66 337 aa11.08□□□□□ -0.64
TFF3-203ENST00000489676 PKN3Q6P5Z2 889 aa11.08□□□□□ -0.64
TFF3-203ENST00000489676 CCDC137Q6PK04 289 aaKnown RBP11.08□□□□□ -0.64
TFF3-203ENST00000489676 Q6ZVU0 165 aa11.08□□□□□ -0.64
TFF3-203ENST00000489676 METTL3Q86U44 580 aaKnown RBP11.08□□□□□ -0.64
TFF3-203ENST00000489676 KLHDC8BQ8IXV7 354 aa11.08□□□□□ -0.64
TFF3-203ENST00000489676 ZNF567Q8N184 647 aa11.08□□□□□ -0.64
TFF3-203ENST00000489676 PCDH20Q8N6Y1 951 aaKnown RBP11.08□□□□□ -0.64
TFF3-203ENST00000489676 FAM71DQ8N9W8 422 aa11.08□□□□□ -0.64
TFF3-203ENST00000489676 ATP11CQ8NB49 1132 aa11.08□□□□□ -0.64
TFF3-203ENST00000489676 TSEN2Q8NCE0 465 aaKnown RBP11.08□□□□□ -0.64
TFF3-203ENST00000489676 PJA1Q8NG27 643 aa11.08□□□□□ -0.64
TFF3-203ENST00000489676 TEKT5Q96M29 485 aa11.08□□□□□ -0.64
TFF3-203ENST00000489676 NSMCE3Q96MG7 304 aa11.08□□□□□ -0.64
TFF3-203ENST00000489676 SPATA13Q96N96 652 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms