RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 DPCR1Q3MIW9 517 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 BRMS1LQ5PSV4 323 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 FAM46CQ5VWP2 391 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 SEL1L3Q68CR1 1132 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 C22orf39Q6P5X5 142 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 TFAP2DQ7Z6R9 452 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 DSG4Q86SJ6 1040 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 DCAF4L2Q8NA75 395 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 MLKLQ8NB16 471 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 LSM14AQ8ND56 463 aaKnown RBP12.03□□□□□ -0.48
ACTN4-206ENST00000489451 RFFLQ8WZ73 363 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 DCBLD2Q96PD2 775 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 MUC3BQ9H195 1237 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 TNKS2Q9H2K2 1166 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 WDCPQ9H6R7 721 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 GPR27Q9NS67 375 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.03□□□□□ -0.48
ACTN4-206ENST00000489451 TMEM59LQ9UK28 342 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 NEU3Q9UQ49 428 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 WASF2Q9Y6W5 498 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 U3KQA8 63 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 ASXL3Q9C0F0 2248 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 MGAQ8IWI9 3026 aa12.03□□□□□ -0.48
ACTN4-206ENST00000489451 PRAMEF26H0Y7S4 382 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 SIGLEC6O43699 453 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 MYF5P13349 255 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 JUPP14923 745 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 CKMT2P17540 419 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 DGKAP23743 735 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 KRT9P35527 623 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 NUDT1P36639 197 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 MTIF2P46199 727 aaKnown RBP12.02□□□□□ -0.49
ACTN4-206ENST00000489451 CLDN2P57739 230 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 ARF5P84085 180 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 OVGP1Q12889 678 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 RTP5Q14D33 572 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 TPD52L1Q16890 204 aaPredicted RBP12.02□□□□□ -0.49
ACTN4-206ENST00000489451 TMEM259Q4ZIN3 620 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 VWA3BQ502W6 1294 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 SETMARQ53H47 684 aaPredicted RBP12.02□□□□□ -0.49
ACTN4-206ENST00000489451 HSP90AA4PQ58FG1 418 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 SLC45A4Q5BKX6 768 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 ARSIQ5FYB1 569 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 SMYD5Q6GMV2 418 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 KDM7AQ6ZMT4 941 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 DPY19L3Q6ZPD9 716 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 ABI3BPQ7Z7G0 1075 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 SETD3Q86TU7 594 aaPredicted RBP12.02□□□□□ -0.49
ACTN4-206ENST00000489451 NOP9Q86U38 636 aaKnown RBP12.02□□□□□ -0.49
ACTN4-206ENST00000489451 HORMAD1Q86X24 394 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 ATP11CQ8NB49 1132 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 TMIEQ8NEW7 156 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 OR13H1Q8NG92 308 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 GRIN3AQ8TCU5 1115 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 NXPE2Q96DL1 559 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 MAGEB5Q9BZ81 275 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 NUP62CLQ9H1M0 184 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 NDST4Q9H3R1 872 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 CLSTN2Q9H4D0 955 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 USP9XQ93008 2570 aaPredicted RBP12.02□□□□□ -0.49
ACTN4-206ENST00000489451 ATMQ13315 3056 aa12.02□□□□□ -0.49
ACTN4-206ENST00000489451 KPNA3O00505 521 aaPredicted RBP12.01□□□□□ -0.49
ACTN4-206ENST00000489451 RAD51BO15315 384 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 LEFTY1O75610 366 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 ENDOD1O94919 500 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 THEGLP0DJG4 465 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 ZNF18P17022 549 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 SCNN1AP37088 669 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 EIF2S3P41091 472 aaKnown RBP12.01□□□□□ -0.49
ACTN4-206ENST00000489451 NOMO3P69849 1222 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 CFHR1Q03591 330 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 DEUP1Q05D60 604 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 MTA1Q13330 715 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 ILKQ13418 452 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 STAT4Q14765 748 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 SLC25A52Q3SY17 297 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 TPRG1LQ5T0D9 272 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 FAM102AQ5T9C2 384 aaPredicted RBP12.01□□□□□ -0.49
ACTN4-206ENST00000489451 MANEALQ5VSG8 457 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 KLHDC7AQ5VTJ3 777 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 TAF3Q5VWG9 929 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 ERN2Q76MJ5 926 aaKnown RBP12.01□□□□□ -0.49
ACTN4-206ENST00000489451 ZDHHC17Q8IUH5 632 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 DCBLD1Q8N8Z6 715 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 EPS8L1Q8TE68 723 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 C18orf8Q96DM3 657 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 KLHDC7BQ96G42 594 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 BMFQ96LC9 184 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 C1orf74Q96LT6 269 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 CFAP57Q96MR6 1250 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 C2orf49Q9BVC5 232 aaPredicted RBP12.01□□□□□ -0.49
ACTN4-206ENST00000489451 NRSN2Q9GZP1 204 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 PRORYQ9H606 182 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 NDFIP2Q9NV92 336 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 KLHL11Q9NVR0 708 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 RRN3Q9NYV6 651 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 PTPRQQ9UMZ3 2332 aa12.01□□□□□ -0.49
ACTN4-206ENST00000489451 CFAP46Q8IYW2 2715 aa12□□□□□ -0.49
ACTN4-206ENST00000489451 POM121BA6NF01 834 aa12□□□□□ -0.49
ACTN4-206ENST00000489451 PYCARD-AS1I3L0S3 204 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms