RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 KPNA3O00505 521 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-233ENST00000489352 ALOX15BO15296 676 aa11.83□□□□□ -0.52
HDAC6-233ENST00000489352 EPB41L2O43491 1005 aaKnown RBP11.83□□□□□ -0.52
HDAC6-233ENST00000489352 RAD1O60671 282 aa11.83□□□□□ -0.52
HDAC6-233ENST00000489352 CCL4P13236 92 aa11.83□□□□□ -0.52
HDAC6-233ENST00000489352 CTSEP14091 401 aa11.83□□□□□ -0.52
HDAC6-233ENST00000489352 TSHRP16473 764 aa11.83□□□□□ -0.52
HDAC6-233ENST00000489352 OAS2P29728 719 aaKnown RBP11.83□□□□□ -0.52
HDAC6-233ENST00000489352 SLC8A3P57103 927 aa11.83□□□□□ -0.52
HDAC6-233ENST00000489352 RPS21P63220 83 aaKnown RBP11.83□□□□□ -0.52
HDAC6-233ENST00000489352 NUCB2P80303 420 aa11.83□□□□□ -0.52
HDAC6-233ENST00000489352 SULT2A1Q06520 285 aa11.83□□□□□ -0.52
HDAC6-233ENST00000489352 ELOCQ15369 112 aa11.83□□□□□ -0.52
HDAC6-233ENST00000489352 MAP9Q49MG5 647 aa11.83□□□□□ -0.52
HDAC6-233ENST00000489352 FSCBQ5H9T9 825 aa11.83□□□□□ -0.52
HDAC6-233ENST00000489352 PIP5KL1Q5T9C9 394 aa11.83□□□□□ -0.52
HDAC6-233ENST00000489352 SEL1L3Q68CR1 1132 aa11.83□□□□□ -0.52
HDAC6-233ENST00000489352 STXBP4Q6ZWJ1 553 aa11.83□□□□□ -0.52
HDAC6-233ENST00000489352 KDELC2Q7Z4H8 507 aa11.83□□□□□ -0.52
HDAC6-233ENST00000489352 PIM3Q86V86 326 aa11.83□□□□□ -0.52
HDAC6-233ENST00000489352 FEM1CQ96JP0 617 aa11.83□□□□□ -0.52
HDAC6-233ENST00000489352 LMLNQ96KR4 655 aa11.83□□□□□ -0.52
HDAC6-233ENST00000489352 ASPSCR1Q9BZE9 553 aa11.83□□□□□ -0.52
HDAC6-233ENST00000489352 SDCBP2Q9H190 292 aa11.83□□□□□ -0.52
HDAC6-233ENST00000489352 HMGXB4Q9UGU5 601 aa11.83□□□□□ -0.52
HDAC6-233ENST00000489352 SLC25A13Q9UJS0 675 aa11.83□□□□□ -0.52
HDAC6-233ENST00000489352 GPR34Q9UPC5 381 aa11.83□□□□□ -0.52
HDAC6-233ENST00000489352 AKAP9Q99996 3911 aa11.82□□□□□ -0.52
HDAC6-233ENST00000489352 DIDO1Q9BTC0 2240 aaKnown RBP11.82□□□□□ -0.52
HDAC6-233ENST00000489352 MCF2LO15068 1137 aa11.82□□□□□ -0.52
HDAC6-233ENST00000489352 ACSL4O60488 711 aa11.82□□□□□ -0.52
HDAC6-233ENST00000489352 C4BPAP04003 597 aaKnown RBP11.82□□□□□ -0.52
HDAC6-233ENST00000489352 ALPIP09923 528 aa11.82□□□□□ -0.52
HDAC6-233ENST00000489352 VARSP26640 1264 aaKnown RBP11.82□□□□□ -0.52
HDAC6-233ENST00000489352 NUMBP49757 651 aa11.82□□□□□ -0.52
HDAC6-233ENST00000489352 CASP5P51878 434 aa11.82□□□□□ -0.52
HDAC6-233ENST00000489352 RPS24P62847 133 aaKnown RBP11.82□□□□□ -0.52
HDAC6-233ENST00000489352 EIF2B5Q13144 721 aaKnown RBP11.82□□□□□ -0.52
HDAC6-233ENST00000489352 ARHGEF7Q14155 803 aa11.82□□□□□ -0.52
HDAC6-233ENST00000489352 PSMD6Q15008 389 aa11.82□□□□□ -0.52
HDAC6-233ENST00000489352 ARL6IP4Q66PJ3 421 aaKnown RBP11.82□□□□□ -0.52
HDAC6-233ENST00000489352 SP5Q6BEB4 398 aaPredicted RBP11.82□□□□□ -0.52
HDAC6-233ENST00000489352 LVRNQ6Q4G3 990 aa11.82□□□□□ -0.52
HDAC6-233ENST00000489352 APCDD1Q8J025 514 aa11.82□□□□□ -0.52
HDAC6-233ENST00000489352 FSTL5Q8N475 847 aaPredicted RBP11.82□□□□□ -0.52
HDAC6-233ENST00000489352 TBATAQ96M53 351 aa11.82□□□□□ -0.52
HDAC6-233ENST00000489352 LRRC61Q9BV99 259 aa11.82□□□□□ -0.52
HDAC6-233ENST00000489352 TCEAL2Q9H3H9 227 aaPredicted RBP11.82□□□□□ -0.52
HDAC6-233ENST00000489352 VRTNQ9H8Y1 702 aa11.82□□□□□ -0.52
HDAC6-233ENST00000489352 GPR27Q9NS67 375 aa11.82□□□□□ -0.52
HDAC6-233ENST00000489352 ZFR2Q9UPR6 939 aaKnown RBP11.82□□□□□ -0.52
HDAC6-233ENST00000489352 KCNMB2Q9Y691 235 aa11.82□□□□□ -0.52
HDAC6-233ENST00000489352 HEATR9A2RTY3 570 aa11.81□□□□□ -0.52
HDAC6-233ENST00000489352 MSI1O43347 362 aaKnown RBP11.81□□□□□ -0.52
HDAC6-233ENST00000489352 RFPL1O75677 317 aa11.81□□□□□ -0.52
HDAC6-233ENST00000489352 LUC7L3O95232 432 aaKnown RBP11.81□□□□□ -0.52
HDAC6-233ENST00000489352 ZBED1O96006 694 aa11.81□□□□□ -0.52
HDAC6-233ENST00000489352 MAP4P27816 1152 aaKnown RBP11.81□□□□□ -0.52
HDAC6-233ENST00000489352 BLKP51451 505 aa11.81□□□□□ -0.52
HDAC6-233ENST00000489352 PPARDQ03181 441 aa11.81□□□□□ -0.52
HDAC6-233ENST00000489352 NCOA4Q13772 614 aa11.81□□□□□ -0.52
HDAC6-233ENST00000489352 C16orf72Q14CZ0 275 aa11.81□□□□□ -0.52
HDAC6-233ENST00000489352 RILPL1Q5EBL4 403 aa11.81□□□□□ -0.52
HDAC6-233ENST00000489352 EFHC2Q5JST6 749 aa11.81□□□□□ -0.52
HDAC6-233ENST00000489352 KIAA1161Q6NSJ0 714 aa11.81□□□□□ -0.52
HDAC6-233ENST00000489352 GKN2Q86XP6 184 aa11.81□□□□□ -0.52
HDAC6-233ENST00000489352 NRSN1Q8IZ57 195 aa11.81□□□□□ -0.52
HDAC6-233ENST00000489352 NLGN4XQ8N0W4 816 aa11.81□□□□□ -0.52
HDAC6-233ENST00000489352 CFAP52Q8N1V2 620 aa11.81□□□□□ -0.52
HDAC6-233ENST00000489352 NLGN4YQ8NFZ3 816 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-233ENST00000489352 PCDH19Q8TAB3 1148 aa11.81□□□□□ -0.52
HDAC6-233ENST00000489352 NANOS1Q8WY41 292 aaKnown RBP11.81□□□□□ -0.52
HDAC6-233ENST00000489352 STARD8Q92502 1023 aa11.81□□□□□ -0.52
HDAC6-233ENST00000489352 EDEM1Q92611 657 aa11.81□□□□□ -0.52
HDAC6-233ENST00000489352 CCDC114Q96M63 670 aa11.81□□□□□ -0.52
HDAC6-233ENST00000489352 IPO9Q96P70 1041 aaKnown RBP11.81□□□□□ -0.52
HDAC6-233ENST00000489352 NT5C1AQ9BXI3 368 aa11.81□□□□□ -0.52
HDAC6-233ENST00000489352 SEMA6CQ9H3T2 930 aa11.81□□□□□ -0.52
HDAC6-233ENST00000489352 OLFML3Q9NRN5 406 aa11.81□□□□□ -0.52
HDAC6-233ENST00000489352 NAALADL1Q9UQQ1 740 aa11.81□□□□□ -0.52
HDAC6-233ENST00000489352 PCDHGA3Q9Y5H0 932 aa11.81□□□□□ -0.52
HDAC6-233ENST00000489352 ZW10O43264 779 aa11.8□□□□□ -0.52
HDAC6-233ENST00000489352 SPINT1O43278 529 aa11.8□□□□□ -0.52
HDAC6-233ENST00000489352 TKTL1P51854 596 aa11.8□□□□□ -0.52
HDAC6-233ENST00000489352 CYP24A1Q07973 514 aa11.8□□□□□ -0.52
HDAC6-233ENST00000489352 SLC12A1Q13621 1099 aa11.8□□□□□ -0.52
HDAC6-233ENST00000489352 ELOAQ14241 798 aaKnown RBP11.8□□□□□ -0.52
HDAC6-233ENST00000489352 TCEA2Q15560 299 aa11.8□□□□□ -0.52
HDAC6-233ENST00000489352 DLG2Q15700 870 aa11.8□□□□□ -0.52
HDAC6-233ENST00000489352 INPP5JQ15735 1006 aaPredicted RBP11.8□□□□□ -0.52
HDAC6-233ENST00000489352 SGSM1Q2NKQ1 1148 aa11.8□□□□□ -0.52
HDAC6-233ENST00000489352 FAM133BQ5BKY9 247 aaKnown RBP11.8□□□□□ -0.52
HDAC6-233ENST00000489352 DCAF12Q5T6F0 453 aa11.8□□□□□ -0.52
HDAC6-233ENST00000489352 MMP21Q8N119 569 aa11.8□□□□□ -0.52
HDAC6-233ENST00000489352 RCBTB1Q8NDN9 531 aa11.8□□□□□ -0.52
HDAC6-233ENST00000489352 FRS2Q8WU20 508 aa11.8□□□□□ -0.52
HDAC6-233ENST00000489352 ZNF516Q92618 1163 aa11.8□□□□□ -0.52
HDAC6-233ENST00000489352 ERCC4Q92889 916 aaPredicted RBP11.8□□□□□ -0.52
HDAC6-233ENST00000489352 ART4Q93070 314 aa11.8□□□□□ -0.52
HDAC6-233ENST00000489352 ELMO3Q96BJ8 720 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms