RNA–Protein interactions for RNA: ENST00000489240.1

C9orf16-203, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 3

Gene C9orf16, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-203ENST00000489240 AGAP3Q96P47 875 aa18.54■□□□□ 0.56
C9orf16-203ENST00000489240 CINPQ9BW66 212 aaPredicted RBP18.54■□□□□ 0.56
C9orf16-203ENST00000489240 CEP41Q9BYV8 373 aa18.54■□□□□ 0.56
C9orf16-203ENST00000489240 SLC2A4RGQ9NR83 387 aa18.54■□□□□ 0.56
C9orf16-203ENST00000489240 DMGDHQ9UI17 866 aaKnown RBP18.54■□□□□ 0.56
C9orf16-203ENST00000489240 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.53■□□□□ 0.56
C9orf16-203ENST00000489240 ZBTB24O43167 697 aaPredicted RBP18.53■□□□□ 0.56
C9orf16-203ENST00000489240 APODP05090 189 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 FDFT1P37268 417 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 HSPA9P38646 679 aaKnown RBP18.53■□□□□ 0.56
C9orf16-203ENST00000489240 NNMTP40261 264 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 GRIA2P42262 883 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 VPS41P49754 854 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 SERPINH1P50454 418 aaKnown RBP18.53■□□□□ 0.56
C9orf16-203ENST00000489240 DRG2P55039 364 aaKnown RBP18.53■□□□□ 0.56
C9orf16-203ENST00000489240 ZP2Q05996 745 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 E2F5Q15329 346 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 PARP6Q2NL67 630 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 LINGO4Q6UY18 593 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 IFT20Q8IY31 132 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 PHTF2Q8N3S3 785 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 GPR161Q8N6U8 529 aaKnown RBP18.53■□□□□ 0.56
C9orf16-203ENST00000489240 CNTD1Q8N815 330 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 BBOF1Q8ND07 529 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 UCMAQ8WVF2 138 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 ATXN2LQ8WWM7 1075 aaKnown RBP18.53■□□□□ 0.56
C9orf16-203ENST00000489240 MSANTD3Q96H12 275 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 SNF8Q96H20 258 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 PPP1R2P1Q96PQ5 205 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 TRIM31Q9BZY9 425 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 CIPCQ9C0C6 399 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 EPB41L5Q9HCM4 733 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 NT5MQ9NPB1 228 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 FAM114A2Q9NRY5 505 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 ELOVL2Q9NXB9 296 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.53■□□□□ 0.56
C9orf16-203ENST00000489240 RSPH14Q9UHP6 348 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 HS3ST2Q9Y278 367 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 ATP8A1Q9Y2Q0 1164 aa18.53■□□□□ 0.56
C9orf16-203ENST00000489240 V9GYY5 206 aaPredicted RBP18.53■□□□□ 0.56
C9orf16-203ENST00000489240 MUC22E2RYF6 1773 aaPredicted RBP18.53■□□□□ 0.56
C9orf16-203ENST00000489240 C5orf42Q9H799 3197 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 TBC1D3BA6NDS4 549 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 SPECC1L-ADORA2AF8WAN1 911 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 TMCC1O94876 653 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 KAT7O95251 611 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 HLA-DQB2P05538 268 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 SRPRAP08240 638 aaKnown RBP18.52■□□□□ 0.56
C9orf16-203ENST00000489240 CTHP32929 405 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 SOX9P48436 509 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 VASPP50552 380 aaPredicted RBP18.52■□□□□ 0.56
C9orf16-203ENST00000489240 PRPSAP1Q14558 356 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 CYTH1Q15438 398 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 TMEM215Q68D42 235 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 PCGF5Q86SE9 256 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 ATP11CQ8NB49 1132 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 SEC14L1Q92503 715 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 CHFRQ96EP1 664 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 PSKH2Q96QS6 385 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 P2RY13Q9BPV8 354 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 GBA3Q9H227 469 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 DPH5Q9H2P9 285 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 GLOD4Q9HC38 313 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 RAB6BQ9NRW1 208 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 SLC8A2Q9UPR5 921 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 ERVW-1Q9UQF0 538 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 PIAS3Q9Y6X2 628 aa18.52■□□□□ 0.56
C9orf16-203ENST00000489240 TCF20Q9UGU0 1960 aaKnown RBP18.51■□□□□ 0.55
C9orf16-203ENST00000489240 BHMG1C9JSJ3 638 aaPredicted RBP18.51■□□□□ 0.55
C9orf16-203ENST00000489240 CD160O95971 181 aa18.51■□□□□ 0.55
C9orf16-203ENST00000489240 DLDP09622 509 aaKnown RBP18.51■□□□□ 0.55
C9orf16-203ENST00000489240 ITIH2P19823 946 aa18.51■□□□□ 0.55
C9orf16-203ENST00000489240 NFKB1P19838 968 aa18.51■□□□□ 0.55
C9orf16-203ENST00000489240 MCM3P25205 808 aa18.51■□□□□ 0.55
C9orf16-203ENST00000489240 IVDP26440 423 aa18.51■□□□□ 0.55
C9orf16-203ENST00000489240 CTSOP43234 321 aaPredicted RBP18.51■□□□□ 0.55
C9orf16-203ENST00000489240 GALK1P51570 392 aa18.51■□□□□ 0.55
C9orf16-203ENST00000489240 RHOAP61586 193 aa18.51■□□□□ 0.55
C9orf16-203ENST00000489240 ST8SIA6P61647 398 aa18.51■□□□□ 0.55
C9orf16-203ENST00000489240 ITKQ08881 620 aa18.51■□□□□ 0.55
C9orf16-203ENST00000489240 CALCOCO2Q13137 446 aa18.51■□□□□ 0.55
C9orf16-203ENST00000489240 SH2D3CQ8N5H7 860 aa18.51■□□□□ 0.55
C9orf16-203ENST00000489240 RPL10LQ96L21 214 aaKnown RBP18.51■□□□□ 0.55
C9orf16-203ENST00000489240 POLR1EQ9GZS1 481 aaKnown RBP18.51■□□□□ 0.55
C9orf16-203ENST00000489240 ANKZF1Q9H8Y5 726 aa18.51■□□□□ 0.55
C9orf16-203ENST00000489240 HEBP1Q9NRV9 189 aa18.51■□□□□ 0.55
C9orf16-203ENST00000489240 WHRNQ9P202 907 aa18.51■□□□□ 0.55
C9orf16-203ENST00000489240 TPX2Q9ULW0 747 aaKnown RBP18.51■□□□□ 0.55
C9orf16-203ENST00000489240 PLA2G4CQ9UP65 541 aa18.51■□□□□ 0.55
C9orf16-203ENST00000489240 SORCS3Q9UPU3 1222 aa18.51■□□□□ 0.55
C9orf16-203ENST00000489240 SNX24Q9Y343 169 aa18.51■□□□□ 0.55
C9orf16-203ENST00000489240 TTLL3Q9Y4R7 772 aa18.51■□□□□ 0.55
C9orf16-203ENST00000489240 ACTL7AQ9Y615 435 aa18.51■□□□□ 0.55
C9orf16-203ENST00000489240 GOLGA6CA6NDK9 693 aa18.5■□□□□ 0.55
C9orf16-203ENST00000489240 GOLGA6BA6NDN3 693 aa18.5■□□□□ 0.55
C9orf16-203ENST00000489240 C19orf67A6NJJ6 358 aa18.5■□□□□ 0.55
C9orf16-203ENST00000489240 PRRT4C9JH25 899 aa18.5■□□□□ 0.55
C9orf16-203ENST00000489240 DNALI1O14645 258 aaPredicted RBP18.5■□□□□ 0.55
C9orf16-203ENST00000489240 PSMD3O43242 534 aa18.5■□□□□ 0.55
C9orf16-203ENST00000489240 CTIFO43310 598 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms