RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 SACM1LQ9NTJ5 587 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 EXOC1Q9NV70 894 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 LUZP4Q9P127 313 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 COL20A1Q9P218 1284 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 BCCIPQ9P287 314 aaKnown RBP eCLIP3.1□□□□□ -1.91
CALD1-221ENST00000489019 DNMT3BQ9UBC3 853 aaKnown RBP3.1□□□□□ -1.91
CALD1-221ENST00000489019 PI4KBQ9UBF8 816 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 LRWD1Q9UFC0 647 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 RWDD2AQ9UIY3 292 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 ADAMTS5Q9UNA0 930 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 GDAQ9Y2T3 454 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 PCDHGB6Q9Y5F9 930 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.1□□□□□ -1.912e-6■■□□□ 12.8
CALD1-221ENST00000489019 MYO3BQ8WXR4 1341 aa3.1□□□□□ -1.91
CALD1-221ENST00000489019 DDX60LQ5H9U9 1706 aaKnown RBP3.1□□□□□ -1.91
CALD1-221ENST00000489019 ARHGEF17Q96PE2 2063 aaPredicted RBP3.09□□□□□ -1.91
CALD1-221ENST00000489019 ESYT2A0FGR8 921 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 GOLGA6L9A6NEM1 432 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 DNAJC9-AS1A6NH13 148 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 DDTLA6NHG4 134 aaPredicted RBP3.09□□□□□ -1.91
CALD1-221ENST00000489019 USP27XA6NNY8 438 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 PP2D1A8MPX8 630 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 ISM1B1AKI9 464 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 KCNJ18B7U540 433 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 TCP10L2B9ZVM9 353 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 F5H423 210 aaPredicted RBP3.09□□□□□ -1.91
CALD1-221ENST00000489019 PYCARD-AS1I3L0S3 204 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 INO80B-WBP1J3KQ70 363 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 PSMA7O14818 248 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 ZBTB5O15062 677 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 ADAMTS3O15072 1205 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 PIP5K1CO60331 668 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 PQBP1O60828 265 aaKnown RBP3.09□□□□□ -1.91
CALD1-221ENST00000489019 TJP3O95049 919 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 TDP2O95551 362 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 FGFR1OPO95684 399 aaKnown RBP3.09□□□□□ -1.91
CALD1-221ENST00000489019 MYF5P13349 255 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 EEF2P13639 858 aaKnown RBP3.09□□□□□ -1.91
CALD1-221ENST00000489019 IDEP14735 1019 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 RHCEP18577 417 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 CHRNA5P30532 468 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 CASQ1P31415 396 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 SHMT1P34896 483 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 PRCPP42785 496 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 ABCG1P45844 678 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 MTIF2P46199 727 aaKnown RBP3.09□□□□□ -1.91
CALD1-221ENST00000489019 COPB1P53618 953 aaKnown RBP3.09□□□□□ -1.91
CALD1-221ENST00000489019 FMO1Q01740 532 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 SATB1Q01826 763 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 RHDQ02161 417 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 UBXN1Q04323 297 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 ICA1Q05084 483 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 GABPAQ06546 454 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 ZNF543Q08ER8 600 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 ORC2Q13416 577 aaPredicted RBP3.09□□□□□ -1.91
CALD1-221ENST00000489019 TRIM14Q14142 442 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 KCNJ12Q14500 433 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 KCNB1Q14721 858 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 EZH2Q15910 746 aaKnown RBP3.09□□□□□ -1.91
CALD1-221ENST00000489019 CNGA2Q16280 664 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 SLC15A2Q16348 729 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 CDC37Q16543 378 aaPredicted RBP3.09□□□□□ -1.91
CALD1-221ENST00000489019 IL17AQ16552 155 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 UBE2SQ16763 222 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 TMEM95Q3KNT9 176 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 USH1GQ495M9 461 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 PRAMEF17Q5VTA0 474 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 RNF220Q5VTB9 566 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 SUMO4Q6EEV6 95 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 APOBEC3HQ6NTF7 200 aaKnown RBP3.09□□□□□ -1.91
CALD1-221ENST00000489019 SYT10Q6XYQ8 523 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 CCDC149Q6ZUS6 474 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 TOGARAM2Q6ZUX3 1019 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 TMEM179Q6ZVK1 233 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 CAND1Q86VP6 1230 aaKnown RBP3.09□□□□□ -1.91
CALD1-221ENST00000489019 SESTD1Q86VW0 696 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 CHSY1Q86X52 802 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 ZNF354CQ86Y25 554 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 CNGA4Q8IV77 575 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 SMAP1Q8IYB5 467 aaPredicted RBP3.09□□□□□ -1.91
CALD1-221ENST00000489019 FAM186BQ8IYM0 893 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 NME8Q8N427 588 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 C4orf32Q8N8J7 132 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 ACRBPQ8NEB7 543 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 MNS1Q8NEH6 495 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 CYP2W1Q8TAV3 490 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 SPATA20Q8TB22 786 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 NOC3LQ8WTT2 800 aaKnown RBP3.09□□□□□ -1.91
CALD1-221ENST00000489019 LRTOMTQ8WZ04 291 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 SPSB4Q96A44 273 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 NMD3Q96D46 503 aaKnown RBP3.09□□□□□ -1.91
CALD1-221ENST00000489019 PPP1R13BQ96KQ4 1090 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 SCLT1Q96NL6 688 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 PRR25Q96S07 402 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 TSG101Q99816 390 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 C17orf80Q9BSJ5 609 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 APOL5Q9BWW9 433 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 NAA15Q9BXJ9 866 aaKnown RBP3.09□□□□□ -1.91
CALD1-221ENST00000489019 INO80BQ9C086 356 aaPredicted RBP3.09□□□□□ -1.91
CALD1-221ENST00000489019 GLT8D2Q9H1C3 349 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms