RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 TNFRSF8P28908 595 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 FDFT1P37268 417 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 HSPA9P38646 679 aaKnown RBP16.3■□□□□ 0.2
CLDN11-208ENST00000488989 MAGEA6P43360 314 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 MMP13P45452 471 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 RPL21P46778 160 aaKnown RBP16.3■□□□□ 0.2
CLDN11-208ENST00000488989 GUCY2DQ02846 1103 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 GPS1Q13098 491 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 EIF4HQ15056 248 aaKnown RBP16.3■□□□□ 0.2
CLDN11-208ENST00000488989 CYTH1Q15438 398 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 KCTD19Q17RG1 926 aaPredicted RBP16.3■□□□□ 0.2
CLDN11-208ENST00000488989 PARP6Q2NL67 630 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 PREPLQ4J6C6 727 aaPredicted RBP16.3■□□□□ 0.2
CLDN11-208ENST00000488989 MBLAC2Q68D91 279 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 ITPRIPL1Q6GPH6 555 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 SUGP1Q8IWZ8 645 aaKnown RBP16.3■□□□□ 0.2
CLDN11-208ENST00000488989 BBS5Q8N3I7 341 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 EIF1ADQ8N9N8 165 aaKnown RBP16.3■□□□□ 0.2
CLDN11-208ENST00000488989 TERB1Q8NA31 727 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 USP33Q8TEY7 942 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 CEP41Q9BYV8 373 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 GBA3Q9H227 469 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 EPC1Q9H2F5 836 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 C8orf33Q9H7E9 229 aaPredicted RBP16.3■□□□□ 0.2
CLDN11-208ENST00000488989 GLOD4Q9HC38 313 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 EPB41L5Q9HCM4 733 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 SLC2A4RGQ9NR83 387 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 FAM114A2Q9NRY5 505 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 GRHL1Q9NZI5 618 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 SEPT3Q9UH03 358 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 SNX24Q9Y343 169 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 ACTL7AQ9Y615 435 aa16.3■□□□□ 0.2
CLDN11-208ENST00000488989 C19orf67A6NJJ6 358 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 NDC80O14777 642 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 TP73O15350 636 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 TIMM44O43615 452 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 SEC31AO94979 1220 aaKnown RBP16.29■□□□□ 0.2
CLDN11-208ENST00000488989 METTL18O95568 372 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 ASGR2P07307 311 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 TUBBP07437 444 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 GLULP15104 373 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 POLR2EP19388 210 aaKnown RBP16.29■□□□□ 0.2
CLDN11-208ENST00000488989 ADCY8P40145 1251 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 VPS41P49754 854 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 SERPINH1P50454 418 aaKnown RBP16.29■□□□□ 0.2
CLDN11-208ENST00000488989 ECT2LQ008S8 904 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 ZP2Q05996 745 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 MESP2Q0VG99 397 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 TDGQ13569 410 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 SEMA5AQ13591 1074 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 NAA30Q147X3 362 aaPredicted RBP16.29■□□□□ 0.2
CLDN11-208ENST00000488989 WDR93Q6P2C0 686 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 ARHGEF18Q6ZSZ5 1173 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 IFT20Q8IY31 132 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 PGBD5Q8N414 524 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 BBOF1Q8ND07 529 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 TTC8Q8TAM2 541 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 SNF8Q96H20 258 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 AGAP3Q96P47 875 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 FCRL5Q96RD9 977 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 PNKPQ96T60 521 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 MGME1Q9BQP7 344 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 FAM129AQ9BZQ8 928 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 ETNK1Q9HBU6 452 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 NT5MQ9NPB1 228 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 HAUS2Q9NVX0 235 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 RAB21Q9UL25 225 aa16.29■□□□□ 0.2
CLDN11-208ENST00000488989 FARP1Q9Y4F1 1045 aaPredicted RBP16.29■□□□□ 0.2
CLDN11-208ENST00000488989 TCF20Q9UGU0 1960 aaKnown RBP16.28■□□□□ 0.2
CLDN11-208ENST00000488989 PRRT4C9JH25 899 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 MUSKO15146 869 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 TMCC1O94876 653 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 MT-CO1P00395 513 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 SRPRAP08240 638 aaKnown RBP16.28■□□□□ 0.2
CLDN11-208ENST00000488989 SRFP11831 508 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 SRCP12931 536 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 ITIH2P19823 946 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 NFKB1P19838 968 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 CR2P20023 1033 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 PSMB4P28070 264 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 CTHP32929 405 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 GRIA2P42262 883 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 CTSOP43234 321 aaPredicted RBP16.28■□□□□ 0.2
CLDN11-208ENST00000488989 NUMBP49757 651 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 PFKPQ01813 784 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 NSUN2Q08J23 767 aaKnown RBP eCLIP16.28■□□□□ 0.2
CLDN11-208ENST00000488989 CUL1Q13616 776 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 ZNF235Q14590 738 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 TRADDQ15628 312 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 FAM182AQ5T1J6 154 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 RNASEH2BQ5TBB1 312 aaKnown RBP16.28■□□□□ 0.2
CLDN11-208ENST00000488989 LINGO4Q6UY18 593 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 LEKR1Q6ZMV7 388 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 PCGF5Q86SE9 256 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 RALGPS2Q86X27 583 aaPredicted RBP16.28■□□□□ 0.2
CLDN11-208ENST00000488989 SH2D3CQ8N5H7 860 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 KDM1BQ8NB78 822 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 ISG20Q96AZ6 181 aaKnown RBP16.28■□□□□ 0.2
CLDN11-208ENST00000488989 TADA1Q96BN2 335 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 MSANTD3Q96H12 275 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms