RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, human

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-231	ENST00000488905	AKT2	P31751	481 aa		18.83	■□□□□ 0.6
HDAC6-231	ENST00000488905	FLT3	P36888	993 aa		18.83	■□□□□ 0.6
HDAC6-231	ENST00000488905	SEMG2	Q02383	582 aa		18.83	■□□□□ 0.6
HDAC6-231	ENST00000488905	KCNMA1	Q12791	1236 aa		18.83	■□□□□ 0.6
HDAC6-231	ENST00000488905	DRAP1	Q14919	205 aa	Predicted RBP	18.83	■□□□□ 0.6
HDAC6-231	ENST00000488905	RTP5	Q14D33	572 aa		18.83	■□□□□ 0.6
HDAC6-231	ENST00000488905	ZNF284	Q2VY69	593 aa		18.83	■□□□□ 0.6
HDAC6-231	ENST00000488905	VWA3B	Q502W6	1294 aa		18.83	■□□□□ 0.6
HDAC6-231	ENST00000488905	ERN2	Q76MJ5	926 aa	Known RBP	18.83	■□□□□ 0.6
HDAC6-231	ENST00000488905	OR7D4	Q8NG98	312 aa		18.83	■□□□□ 0.6
HDAC6-231	ENST00000488905	C18orf8	Q96DM3	657 aa		18.83	■□□□□ 0.6
HDAC6-231	ENST00000488905	PPP1R16A	Q96I34	528 aa		18.83	■□□□□ 0.6
HDAC6-231	ENST00000488905	C1orf74	Q96LT6	269 aa		18.83	■□□□□ 0.6
HDAC6-231	ENST00000488905	CALN1	Q9BXU9	219 aa		18.83	■□□□□ 0.6
HDAC6-231	ENST00000488905	TNKS2	Q9H2K2	1166 aa		18.83	■□□□□ 0.6
HDAC6-231	ENST00000488905	IL36A	Q9UHA7	158 aa		18.83	■□□□□ 0.6
HDAC6-231	ENST00000488905	AK5	Q9Y6K8	562 aa		18.83	■□□□□ 0.6
HDAC6-231	ENST00000488905	ATM	Q13315	3056 aa		18.83	■□□□□ 0.6
HDAC6-231	ENST00000488905	FAM170A	A1A519	330 aa		18.82	■□□□□ 0.6
HDAC6-231	ENST00000488905	TLX3	O43711	291 aa	Predicted RBP	18.82	■□□□□ 0.6
HDAC6-231	ENST00000488905	DGKA	P23743	735 aa		18.82	■□□□□ 0.6
HDAC6-231	ENST00000488905	RECQL	P46063	649 aa	Predicted RBP	18.82	■□□□□ 0.6
HDAC6-231	ENST00000488905	INSM1	Q01101	510 aa	Predicted RBP	18.82	■□□□□ 0.6
HDAC6-231	ENST00000488905	ZNF211	Q13398	564 aa	Predicted RBP	18.82	■□□□□ 0.6
HDAC6-231	ENST00000488905	ARTN	Q5T4W7	220 aa		18.82	■□□□□ 0.6
HDAC6-231	ENST00000488905	TAF3	Q5VWG9	929 aa		18.82	■□□□□ 0.6
HDAC6-231	ENST00000488905	ZNF783	Q6ZMS7	281 aa		18.82	■□□□□ 0.6
HDAC6-231	ENST00000488905	GCNT7	Q6ZNI0	430 aa		18.82	■□□□□ 0.6
HDAC6-231	ENST00000488905	DPY19L3	Q6ZPD9	716 aa		18.82	■□□□□ 0.6
HDAC6-231	ENST00000488905	BNIPL	Q7Z465	357 aa		18.82	■□□□□ 0.6
HDAC6-231	ENST00000488905	ERICH1	Q86X53	443 aa		18.82	■□□□□ 0.6
HDAC6-231	ENST00000488905	SLC25A45	Q8N413	288 aa		18.82	■□□□□ 0.6
HDAC6-231	ENST00000488905	OR13H1	Q8NG92	308 aa		18.82	■□□□□ 0.6
HDAC6-231	ENST00000488905	OR4C6	Q8NH72	309 aa		18.82	■□□□□ 0.6
HDAC6-231	ENST00000488905	TUBGCP2	Q9BSJ2	902 aa		18.82	■□□□□ 0.6
HDAC6-231	ENST00000488905	HDAC8	Q9BY41	377 aa		18.82	■□□□□ 0.6
HDAC6-231	ENST00000488905	KLHL11	Q9NVR0	708 aa		18.82	■□□□□ 0.6
HDAC6-231	ENST00000488905	ZNF212	Q9UDV6	495 aa		18.82	■□□□□ 0.6
HDAC6-231	ENST00000488905	ZFR2	Q9UPR6	939 aa	Known RBP	18.82	■□□□□ 0.6
HDAC6-231	ENST00000488905	CLCA2	Q9UQC9	943 aa		18.82	■□□□□ 0.6
HDAC6-231	ENST00000488905	ILVBL	A1L0T0	632 aa		18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	GOLGA8S	H3BPF8	625 aa		18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	ZNF821	O75541	412 aa	Predicted RBP	18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	LEFTY1	O75610	366 aa		18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	PCDH8	O95206	1070 aa		18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	LSM8	O95777	96 aa	Known RBP	18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	EIF2S3	P41091	472 aa	Known RBP	18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	SERPINH1	P50454	418 aa	Known RBP	18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	NEK3	P51956	506 aa		18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	DAB2	P98082	770 aa		18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	TMEM259	Q4ZIN3	620 aa		18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	HS1BP3	Q53T59	392 aa		18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	C2CD6	Q53TS8	623 aa		18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	HSP90AA4P	Q58FG1	418 aa		18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	ARSI	Q5FYB1	569 aa		18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	KLHDC7A	Q5VTJ3	777 aa		18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	SEL1L3	Q68CR1	1132 aa		18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	TRNP1	Q6NT89	227 aa		18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	ABI3BP	Q7Z7G0	1075 aa		18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	SLC22A18AS	Q8N1D0	253 aa		18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	CACTIN-AS1	Q8N1I8	211 aa		18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	MSANTD4	Q8NCY6	345 aa		18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	CFAP57	Q96MR6	1250 aa		18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	HAPLN3	Q96S86	360 aa		18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	CEP44	Q9C0F1	390 aa		18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	UCKL1	Q9NWZ5	548 aa		18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	WASF2	Q9Y6W5	498 aa		18.81	■□□□□ 0.6
HDAC6-231	ENST00000488905	FFAR2	O15552	330 aa		18.8	■□□□□ 0.6
HDAC6-231	ENST00000488905	SRGAP2	O75044	1071 aa		18.8	■□□□□ 0.6
HDAC6-231	ENST00000488905	PIAS2	O75928	621 aa		18.8	■□□□□ 0.6
HDAC6-231	ENST00000488905	ENDOD1	O94919	500 aa		18.8	■□□□□ 0.6
HDAC6-231	ENST00000488905	ITGB7	P26010	798 aa		18.8	■□□□□ 0.6
HDAC6-231	ENST00000488905	ITPKB	P27987	946 aa		18.8	■□□□□ 0.6
HDAC6-231	ENST00000488905	CLDN2	P57739	230 aa		18.8	■□□□□ 0.6
HDAC6-231	ENST00000488905	DPCR1	Q3MIW9	517 aa		18.8	■□□□□ 0.6
HDAC6-231	ENST00000488905	RETSAT	Q6NUM9	610 aa		18.8	■□□□□ 0.6
HDAC6-231	ENST00000488905	PTAR1	Q7Z6K3	402 aa	Predicted RBP	18.8	■□□□□ 0.6
HDAC6-231	ENST00000488905	NOP9	Q86U38	636 aa	Known RBP	18.8	■□□□□ 0.6
HDAC6-231	ENST00000488905	FAM131B	Q86XD5	332 aa		18.8	■□□□□ 0.6
HDAC6-231	ENST00000488905	PCDH20	Q8N6Y1	951 aa	Known RBP	18.8	■□□□□ 0.6
HDAC6-231	ENST00000488905	DCBLD1	Q8N8Z6	715 aa		18.8	■□□□□ 0.6
HDAC6-231	ENST00000488905	SNIP1	Q8TAD8	396 aa	Known RBP	18.8	■□□□□ 0.6
HDAC6-231	ENST00000488905	SPON2	Q9BUD6	331 aa		18.8	■□□□□ 0.6
HDAC6-231	ENST00000488905	NAA15	Q9BXJ9	866 aa	Known RBP	18.8	■□□□□ 0.6
HDAC6-231	ENST00000488905	ZYG11B	Q9C0D3	744 aa		18.8	■□□□□ 0.6
HDAC6-231	ENST00000488905	ATP13A1	Q9HD20	1204 aa		18.8	■□□□□ 0.6
HDAC6-231	ENST00000488905	TMEM59L	Q9UK28	342 aa		18.8	■□□□□ 0.6
HDAC6-231	ENST00000488905	COL27A1	Q8IZC6	1860 aa	Predicted RBP	18.8	■□□□□ 0.6
HDAC6-231	ENST00000488905		A6NNZ2	444 aa		18.79	■□□□□ 0.6
HDAC6-231	ENST00000488905		F8VZ95	297 aa		18.79	■□□□□ 0.6
HDAC6-231	ENST00000488905	PES1	O00541	588 aa	Known RBP	18.79	■□□□□ 0.6
HDAC6-231	ENST00000488905	BRINP1	O60477	761 aa		18.79	■□□□□ 0.6
HDAC6-231	ENST00000488905	ZMPSTE24	O75844	475 aa		18.79	■□□□□ 0.6
HDAC6-231	ENST00000488905	ADRB3	P13945	408 aa		18.79	■□□□□ 0.6
HDAC6-231	ENST00000488905	UCHL3	P15374	230 aa		18.79	■□□□□ 0.6
HDAC6-231	ENST00000488905	NOMO3	P69849	1222 aa		18.79	■□□□□ 0.6
HDAC6-231	ENST00000488905	ARF5	P84085	180 aa		18.79	■□□□□ 0.6
HDAC6-231	ENST00000488905	E2F1	Q01094	437 aa		18.79	■□□□□ 0.6
HDAC6-231	ENST00000488905	KIAA1161	Q6NSJ0	714 aa		18.79	■□□□□ 0.6
HDAC6-231	ENST00000488905	LRRC69	Q6ZNQ3	347 aa		18.79	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms