RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, human

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD1L-208	ENST00000488864	HSF5	Q4G112	596 aa	Predicted RBP	13.57	□□□□□ -0.24
CHD1L-208	ENST00000488864	CCDC149	Q6ZUS6	474 aa		13.57	□□□□□ -0.24
CHD1L-208	ENST00000488864	MIB1	Q86YT6	1006 aa		13.57	□□□□□ -0.24
CHD1L-208	ENST00000488864	HS6ST3	Q8IZP7	471 aa		13.57	□□□□□ -0.24
CHD1L-208	ENST00000488864	ATP11C	Q8NB49	1132 aa		13.57	□□□□□ -0.24
CHD1L-208	ENST00000488864	PSMG2	Q969U7	264 aa		13.57	□□□□□ -0.24
CHD1L-208	ENST00000488864	GBP5	Q96PP8	586 aa		13.57	□□□□□ -0.24
CHD1L-208	ENST00000488864	TTLL2	Q9BWV7	592 aa		13.57	□□□□□ -0.24
CHD1L-208	ENST00000488864	MMADHC	Q9H3L0	296 aa	Predicted RBP	13.57	□□□□□ -0.24
CHD1L-208	ENST00000488864	PCDH9	Q9HC56	1237 aa		13.57	□□□□□ -0.24
CHD1L-208	ENST00000488864	HCFC1R1	Q9NWW0	138 aa		13.57	□□□□□ -0.24
CHD1L-208	ENST00000488864	TLR5	O60602	858 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	ITGAV	P06756	1048 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	CD48	P09326	243 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	ANPEP	P15144	967 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	PHB	P35232	272 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	MLLT1	Q03111	559 aa	Predicted RBP	13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	CA9	Q16790	459 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	PPM1L	Q5SGD2	360 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	C10orf120	Q5SQS8	335 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	FAM182A	Q5T1J6	154 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	STRADA	Q7RTN6	431 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	IGDCC3	Q8IVU1	814 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	NKD2	Q969F2	451 aa	Predicted RBP	13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	TUBGCP5	Q96RT8	1024 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	EPAS1	Q99814	870 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	IGFLR1	Q9H665	355 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	ANLN	Q9NQW6	1124 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864		H3BRJ5	948 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	NRG2	O14511	850 aa	Predicted RBP	13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	TGDS	O95455	350 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	MT-ND3	P03897	115 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	ENO1	P06733	434 aa	Known RBP	13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	GJA1	P17302	382 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	RAP1GDS1	P52306	607 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	LAMB3	Q13751	1172 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	BBS9	Q3SYG4	887 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	IZUMO2	Q6UXV1	221 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	PYROXD2	Q8N2H3	581 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	NAT8L	Q8N9F0	302 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	RNF34	Q969K3	372 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	PANX3	Q96QZ0	392 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	CORO1B	Q9BR76	489 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	SNRNP25	Q9BV90	132 aa	Known RBP	13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	WDR6	Q9NNW5	1121 aa	Known RBP	13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	PDP2	Q9P2J9	529 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	FETUB	Q9UGM5	382 aa		13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	COLQ	Q9Y215	455 aa	Predicted RBP	13.56	□□□□□ -0.24
CHD1L-208	ENST00000488864	C2orf78	A6NCI8	922 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	ZNF840P	A6NDX5	716 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864		I6L893	689 aa	Predicted RBP	13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	USP1	O94782	785 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	TMEM63A	O94886	807 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	HMBS	P08397	361 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	PYGB	P11216	843 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	GSTT1	P30711	240 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	CDKN2B	P42772	138 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	SMAD3	P84022	425 aa	Known RBP	13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	KLHL38	Q2WGJ6	581 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	CNPY1	Q3B7I2	92 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	TMEM150A	Q86TG1	271 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	PALM2	Q8IXS6	379 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	PPIL6	Q8IXY8	311 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	C12orf76	Q8N812	135 aa	Predicted RBP	13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	SLC35B2	Q8TB61	432 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	SHKBP1	Q8TBC3	707 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	MYRFL	Q96LU7	910 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	ZNF576	Q9H609	170 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	ZNF395	Q9H8N7	513 aa	Predicted RBP	13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	KRT7	P08729	469 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	ZDHHC11B	P0C7U3	371 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	GABRR2	P28476	465 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	RPL22	P35268	128 aa	Known RBP	13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	NRL	P54845	237 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	TFDP3	Q5H9I0	405 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	PDE12	Q6L8Q7	609 aa	Known RBP	13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	RIPOR1	Q6ZS17	1223 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	SH2D5	Q6ZV89	423 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	BNIPL	Q7Z465	357 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	CHSY1	Q86X52	802 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	ARHGAP18	Q8N392	663 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	KCTD6	Q8NC69	237 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	RBM15B	Q8NDT2	890 aa	Known RBP	13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	TTC16	Q8NEE8	873 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	CCDC110	Q8TBZ0	833 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	ALKBH8	Q96BT7	664 aa	Known RBP	13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	CALN1	Q9BXU9	219 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	PHACTR1	Q9C0D0	580 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	NACA2	Q9H009	215 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	TRPM5	Q9NZQ8	1165 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	ANGPTL2	Q9UKU9	493 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	MAFF	Q9ULX9	164 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	PLA2G4C	Q9UP65	541 aa		13.55	□□□□□ -0.24
CHD1L-208	ENST00000488864	CAPN14	A8MX76	684 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	MOCS2	O96007	188 aa	Predicted RBP	13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	CDH6	P55285	790 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	CYP4F8	P98187	520 aa		13.54	□□□□□ -0.24

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