RNA–Protein interactions for RNA: ENST00000488592.1

SCMH1-215, Transcript of Scm polycomb group protein homolog 1, human

TSL 2

Gene SCMH1, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCMH1-215	ENST00000488592	RFFL	Q8WZ73	363 aa		12.82	□□□□□ -0.36
SCMH1-215	ENST00000488592	NTAN1	Q96AB6	310 aa		12.82	□□□□□ -0.36
SCMH1-215	ENST00000488592	RAB7B	Q96AH8	199 aa		12.82	□□□□□ -0.36
SCMH1-215	ENST00000488592	NXPE2	Q96DL1	559 aa		12.82	□□□□□ -0.36
SCMH1-215	ENST00000488592	SAMSN1	Q9NSI8	373 aa	Known RBP	12.82	□□□□□ -0.36
SCMH1-215	ENST00000488592	KLHL11	Q9NVR0	708 aa		12.82	□□□□□ -0.36
SCMH1-215	ENST00000488592	IL36A	Q9UHA7	158 aa		12.82	□□□□□ -0.36
SCMH1-215	ENST00000488592	FASN	P49327	2511 aa	Known RBP	12.82	□□□□□ -0.36
SCMH1-215	ENST00000488592	NBEA	Q8NFP9	2946 aa		12.82	□□□□□ -0.36
SCMH1-215	ENST00000488592	TDRD6	O60522	2096 aa	Known RBP	12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592		A0A0D9SEW6	157 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	KPNA3	O00505	521 aa	Predicted RBP	12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	KCNK3	O14649	394 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	WNT9A	O14904	365 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	SNAP91	O60641	907 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	MT-CO1	P00395	513 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	MME	P08473	750 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	ACP1	P24666	158 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	SDC4	P31431	198 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	GGCX	P38435	758 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	NEK3	P51956	506 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	METAP1	P53582	386 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	AIF1	P55008	147 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	IL9R	Q01113	521 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	GNA12	Q03113	381 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	ZNF284	Q2VY69	593 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	TMEM259	Q4ZIN3	620 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	TAF3	Q5VWG9	929 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	TRNP1	Q6NT89	227 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	TFAP2D	Q7Z6R9	452 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	ABI3BP	Q7Z7G0	1075 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	SPATS2	Q86XZ4	545 aa	Known RBP	12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	CASKIN2	Q8WXE0	1202 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	ASB12	Q8WXK4	309 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	CENPI	Q92674	756 aa	Predicted RBP	12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	ARHGEF26	Q96DR7	871 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	KLHDC7B	Q96G42	594 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	CFAP57	Q96MR6	1250 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	USP29	Q9HBJ7	922 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	ATP13A1	Q9HD20	1204 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	GPR27	Q9NS67	375 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592	LHX6	Q9UPM6	363 aa		12.81	□□□□□ -0.36
SCMH1-215	ENST00000488592		A0A087WV48	116 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592		A0A1W2PQU0	124 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	C2CD4B	A6NLJ0	364 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	ZNF821	O75541	412 aa	Predicted RBP	12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	CALB1	P05937	261 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	RHOQ	P17081	205 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	CKMT2	P17540	419 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	RRM1	P23921	792 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	ADRA1B	P35368	520 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	STAT1	P42224	750 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	RPS21	P63220	83 aa	Known RBP	12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	FMO1	Q01740	532 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	ZNF211	Q13398	564 aa	Predicted RBP	12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	KRT31	Q15323	416 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	PPP1R2P3	Q6NXS1	205 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	DHRS13	Q6UX07	377 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	DPY19L3	Q6ZPD9	716 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	NLRP14	Q86W24	1093 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	FAM131B	Q86XD5	332 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	PHF13	Q86YI8	300 aa	Predicted RBP	12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	GATAD2A	Q86YP4	633 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	DENND6B	Q8NEG7	585 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	CPA5	Q8WXQ8	436 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	HEPH	Q9BQS7	1158 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	OSBPL1A	Q9BXW6	950 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	NRSN2	Q9GZP1	204 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	MAGEH1	Q9H213	219 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	METTL5	Q9NRN9	209 aa	Known RBP	12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	EVA1B	Q9NVM1	165 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	TMEM248	Q9NWD8	314 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	DONSON	Q9NYP3	566 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	MPP6	Q9NZW5	540 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	OR12D3	Q9UGF7	316 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	SIK3	Q9Y2K2	1263 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	HS3ST3A1	Q9Y663	406 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	WASF2	Q9Y6W5	498 aa		12.8	□□□□□ -0.36
SCMH1-215	ENST00000488592	PTPRQ	Q9UMZ3	2332 aa		12.79	□□□□□ -0.36
SCMH1-215	ENST00000488592	IGSF10	Q6WRI0	2623 aa		12.79	□□□□□ -0.36
SCMH1-215	ENST00000488592	TRABD2B	A6NFA1	517 aa		12.79	□□□□□ -0.36
SCMH1-215	ENST00000488592	LRRC10B	A6NIK2	292 aa		12.79	□□□□□ -0.36
SCMH1-215	ENST00000488592		A6NNZ2	444 aa		12.79	□□□□□ -0.36
SCMH1-215	ENST00000488592	GOLGA8S	H3BPF8	625 aa		12.79	□□□□□ -0.36
SCMH1-215	ENST00000488592	CBX4	O00257	560 aa		12.79	□□□□□ -0.36
SCMH1-215	ENST00000488592	SMAD6	O43541	496 aa	Known RBP	12.79	□□□□□ -0.36
SCMH1-215	ENST00000488592	LEFTY1	O75610	366 aa		12.79	□□□□□ -0.36
SCMH1-215	ENST00000488592	GSR	P00390	522 aa		12.79	□□□□□ -0.36
SCMH1-215	ENST00000488592	THEGL	P0DJG4	465 aa		12.79	□□□□□ -0.36
SCMH1-215	ENST00000488592	UNG	P13051	313 aa	Predicted RBP	12.79	□□□□□ -0.36
SCMH1-215	ENST00000488592	ADRB3	P13945	408 aa		12.79	□□□□□ -0.36
SCMH1-215	ENST00000488592	MAT2A	P31153	395 aa	Known RBP	12.79	□□□□□ -0.36
SCMH1-215	ENST00000488592	L1CAM	P32004	1257 aa		12.79	□□□□□ -0.36
SCMH1-215	ENST00000488592	HTR7	P34969	479 aa		12.79	□□□□□ -0.36
SCMH1-215	ENST00000488592	NSF	P46459	744 aa	Known RBP	12.79	□□□□□ -0.36
SCMH1-215	ENST00000488592	POLR2F	P61218	127 aa	Known RBP	12.79	□□□□□ -0.36
SCMH1-215	ENST00000488592	ARF5	P84085	180 aa		12.79	□□□□□ -0.36
SCMH1-215	ENST00000488592	E2F1	Q01094	437 aa		12.79	□□□□□ -0.36
SCMH1-215	ENST00000488592	PROX2	Q3B8N5	592 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms