RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 MANEAQ5SRI9 462 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 TRAPPC11Q7Z392 1133 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 SETD9Q8NE22 299 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 RFWD2Q8NHY2 731 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 MPLKIPQ8TAP9 179 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 NOC3LQ8WTT2 800 aaKnown RBP4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 TMEM174Q8WUU8 243 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 RUFY2Q8WXA3 655 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 HSPH1Q92598 858 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 CNOT9Q92600 299 aaKnown RBP4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 MPP4Q96JB8 637 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 NLRP4Q96MN2 994 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 ZNF778Q96MU6 729 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 ZHX3Q9H4I2 956 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 ENTPD7Q9NQZ7 604 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 RNF146Q9NTX7 359 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 POT1Q9NUX5 634 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 RNF7Q9UBF6 113 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 HDAC6Q9UBN7 1215 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 OSGIN2Q9Y236 505 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 ZNF521Q96K83 1311 aa4.15□□□□□ -1.75
ECHDC1-217ENST00000488087 A0A0A0MQY5 61 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 TRBV5-7A0A0A0MS05 114 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 A0A0G2JK05 382 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 TMEM272A0A1B0GTI8 110 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 FAM90A7PA6NKC0 464 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 FAM90A22PA8MWA6 464 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 FAM90A12PA8MX19 464 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 FAM90A23PA8MXZ1 464 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 EYA2O00167 538 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 SOCS2O14508 198 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 PER2O15055 1255 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 EPB41L2O43491 1005 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 KIF1CO43896 1103 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 TULP3O75386 442 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 MOSPD3O75425 235 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 SYF2O95926 243 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 CHRM4P08173 479 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 GPD2P43304 727 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 RPP30P78346 268 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 DDX10Q13206 875 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 SLC18A3Q16572 532 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 FBXO43Q4G163 708 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 SYTL3Q4VX76 610 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 NAPEPLDQ6IQ20 393 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 PIP4P1Q86T03 277 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 HEATR4Q86WZ0 1026 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 FAM217AQ8IXS0 508 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 TMEM199Q8N511 208 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 NRACQ8N912 160 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 LSM14AQ8ND56 463 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 ZNF548Q8NEK5 533 aaPredicted RBP4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 HDAC7Q8WUI4 952 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 SMG7Q92540 1137 aaKnown RBP4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 EYA3Q99504 573 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 TMEM79Q9BSE2 394 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 LMAN2LQ9H0V9 348 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 SLC32A1Q9H598 525 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 CXorf56Q9H5V9 222 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 EPHX3Q9H6B9 360 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 TASP1Q9H6P5 420 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 JMJD4Q9H9V9 463 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 UBN1Q9NPG3 1134 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 SEMA4BQ9NPR2 832 aaPredicted RBP4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 ZDHHC7Q9NXF8 308 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 NLKQ9UBE8 527 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 PLEKHB1Q9UF11 243 aaPredicted RBP4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 PCDHA12Q9UN75 941 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 ARHGAP26Q9UNA1 814 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 CNPY2Q9Y2B0 182 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 SLC4A4Q9Y6R1 1079 aa4.14□□□□□ -1.75
ECHDC1-217ENST00000488087 PCSK5Q92824 1860 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 MST1RQ04912 1400 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 COL3A1P02461 1466 aaPredicted RBP4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 NCAPD3P42695 1498 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 ABCC9O60706 1549 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 J3KRW8 73 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 RNMTO43148 476 aaKnown RBP4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 CEP104O60308 925 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 ATG13O75143 517 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 ADAP00813 363 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 SERPINC1P01008 464 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 UNGP13051 313 aaPredicted RBP4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 YWHAQP27348 245 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 PTGER1P34995 402 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 RFC1P35251 1148 aaPredicted RBP4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 KRT9P35527 623 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 DPP6P42658 865 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 CALD1Q05682 793 aaKnown RBP4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 GALNT2Q10471 571 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 PRTGQ2VWP7 1150 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 SLC4A8Q2Y0W8 1093 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 NUGGCQ68CJ6 796 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 C11orf87Q6NUJ2 197 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 IL20RBQ6UXL0 311 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 COLCA1Q6ZS62 124 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 PIM3Q86V86 326 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 GPSM1Q86YR5 675 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms