RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 CST6Q15828 149 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 PLK5Q496M5 336 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 PMS2CLQ68D20 193 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 SLC9A4Q6AI14 798 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 Q6ZVU0 165 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 USP30Q70CQ3 517 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 KIAA1328Q86T90 577 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 LRRC49Q8IUZ0 686 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 TP53INP2Q8IXH6 220 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 STK40Q8N2I9 435 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 RNF10Q8N5U6 811 aaKnown RBP11.88□□□□□ -0.51
CLIP2-207ENST00000487447 KCTD6Q8NC69 237 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 OR8D1Q8WZ84 308 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 CELF6Q96J87 481 aaKnown RBP11.88□□□□□ -0.51
CLIP2-207ENST00000487447 LOXL4Q96JB6 756 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 SPACA7Q96KW9 195 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 RNF157Q96PX1 679 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 CALN1Q9BXU9 219 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 PABPC3Q9H361 631 aaKnown RBP11.88□□□□□ -0.51
CLIP2-207ENST00000487447 CD93Q9NPY3 652 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 KLHL11Q9NVR0 708 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 TRIM10Q9UDY6 481 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 MBD1Q9UIS9 605 aaPredicted RBP11.88□□□□□ -0.51
CLIP2-207ENST00000487447 PPM1HQ9ULR3 514 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 SMG5Q9UPR3 1016 aaKnown RBP11.88□□□□□ -0.51
CLIP2-207ENST00000487447 HYOU1Q9Y4L1 999 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 ACTL7AQ9Y615 435 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 OTOGLQ3ZCN5 2332 aa11.88□□□□□ -0.51
CLIP2-207ENST00000487447 SPAG17Q6Q759 2223 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 J3KR12 359 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 MFSD11O43934 449 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 MAFKO60675 156 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 ADH1BP00325 375 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 C5AR1P21730 350 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 BCKDHBP21953 392 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 CTNNA2P26232 953 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 OXTRP30559 389 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 GJC1P36383 396 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 MARCKSL1P49006 195 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 SIM2Q14190 667 aaPredicted RBP11.87□□□□□ -0.51
CLIP2-207ENST00000487447 PUM1Q14671 1186 aaKnown RBP eCLIP11.87□□□□□ -0.51
CLIP2-207ENST00000487447 GSE1Q14687 1217 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 RFTN1Q14699 578 aaPredicted RBP11.87□□□□□ -0.51
CLIP2-207ENST00000487447 IFI16Q16666 785 aaKnown RBP11.87□□□□□ -0.51
CLIP2-207ENST00000487447 LAIR1Q6GTX8 287 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 KIAA1324Q6UXG2 1013 aaKnown RBP11.87□□□□□ -0.51
CLIP2-207ENST00000487447 SLC36A4Q6YBV0 504 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 DAAM2Q86T65 1068 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 NT5DC3Q86UY8 548 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 KBTBD6Q86V97 674 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 PGBD3Q8N328 593 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 PLD5Q8N7P1 536 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 FRMD1Q8N878 549 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 OR2AP1Q8NGE2 309 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 KIAA1524Q8TCG1 905 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 UBE2Q2Q8WVN8 375 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 LRIG1Q96JA1 1093 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 CCDC114Q96M63 670 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 ZNF599Q96NL3 588 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 TSGA10Q9BZW7 698 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 PCED1AQ9H1Q7 454 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 WSB2Q9NYS7 404 aaPredicted RBP11.87□□□□□ -0.51
CLIP2-207ENST00000487447 LHX3Q9UBR4 397 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 FZD4Q9ULV1 537 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 FCF1Q9Y324 198 aaKnown RBP11.87□□□□□ -0.51
CLIP2-207ENST00000487447 PCDHA3Q9Y5H8 950 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 CAPN6Q9Y6Q1 641 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 WASF2Q9Y6W5 498 aa11.87□□□□□ -0.51
CLIP2-207ENST00000487447 CACNA1AO00555 2505 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 CCDC66A2RUB6 948 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 LRRD1A4D1F6 860 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 RNASEH1O60930 286 aaKnown RBP11.86□□□□□ -0.51
CLIP2-207ENST00000487447 TMCC1O94876 653 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 EPN2O95208 641 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 DNTTP04053 509 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 KRT1P04264 644 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 CTSLP07711 333 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 CCDC175P0C221 793 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 CD6P30203 668 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 PTPN7P35236 360 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 DRD3P35462 400 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 CDKN2BP42772 138 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 PEX5P50542 639 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 CCNHP51946 323 aaPredicted RBP11.86□□□□□ -0.51
CLIP2-207ENST00000487447 CYTH1Q15438 398 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 PPP2R5EQ16537 467 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 RSPO4Q2I0M5 234 aaPredicted RBP11.86□□□□□ -0.51
CLIP2-207ENST00000487447 TTC31Q49AM3 519 aaPredicted RBP11.86□□□□□ -0.51
CLIP2-207ENST00000487447 ACCSLQ4AC99 568 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 CARD16Q5EG05 197 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 TMCO4Q5TGY1 634 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 PEAR1Q5VY43 1037 aaPredicted RBP11.86□□□□□ -0.51
CLIP2-207ENST00000487447 DPY19L3Q6ZPD9 716 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 ARHGAP36Q6ZRI8 547 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 DSG4Q86SJ6 1040 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 SYCE1Q8N0S2 351 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 AADATQ8N5Z0 425 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 FAM160A2Q8N612 972 aaPredicted RBP11.86□□□□□ -0.51
CLIP2-207ENST00000487447 CHST14Q8NCH0 376 aa11.86□□□□□ -0.51
CLIP2-207ENST00000487447 TMIEQ8NEW7 156 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms