RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 B3GNT3Q9Y2A9 372 aa4.36□□□□□ -1.71
PTCD3-216ENST00000487043 KDRP35968 1356 aa4.36□□□□□ -1.71
PTCD3-216ENST00000487043 RGPD1P0DJD0 1748 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 COL18A1P39060 1754 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-216ENST00000487043 PIPSLA2A3N6 862 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 H0YIZ8 118 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 AP3D1O14617 1153 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 AHCYL1O43865 530 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 TMCC2O75069 709 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 PTP4A3O75365 173 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 URI1O94763 535 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-216ENST00000487043 C1SP09871 688 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 NPSP0C0P6 89 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 EBLN1P0CF75 366 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 MYCLP12524 364 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-216ENST00000487043 ARSAP15289 507 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 RPS6KB1P23443 525 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 PRPH2P23942 346 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 PCSK6P29122 969 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 EPHA8P29322 1005 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-216ENST00000487043 SLC8A1P32418 973 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 HNF1BP35680 557 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 ARL3P36405 182 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 RGS2P41220 211 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 GPD2P43304 727 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 RAD52P43351 418 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 MVDP53602 400 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 SLC37A1P57057 533 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 ARHGAP8P85298 464 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 SHC2P98077 582 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 ABHD18Q0P651 414 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 PTP4A2Q12974 167 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 GAB1Q13480 694 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 GPR162Q16538 588 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 ZNF766Q5HY98 468 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 PCID2Q5JVF3 399 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 SH2D4BQ5SQS7 431 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 ABHD17BQ5VST6 288 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 TTLL5Q6EMB2 1281 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 ZNF280DQ6N043 979 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 TMEM88Q6PEY1 159 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 KCNV1Q6PIU1 500 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 MTHFD1LQ6UB35 978 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 SLC39A5Q6ZMH5 540 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 WDR53Q7Z5U6 358 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-216ENST00000487043 SFTPA1Q8IWL2 248 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 SLC44A3Q8N4M1 653 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 MAFAQ8NHW3 353 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-216ENST00000487043 METTL6Q8TCB7 284 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 PROKR1Q8TCW9 393 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 EDC3Q96F86 508 aaKnown RBP4.35□□□□□ -1.71
PTCD3-216ENST00000487043 GPR78Q96P69 363 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 SNX18Q96RF0 628 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 EYA3Q99504 573 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 ADGRE3Q9BY15 652 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 TRIM31Q9BZY9 425 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 SEMA4BQ9NPR2 832 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-216ENST00000487043 PCDHB16Q9NRJ7 776 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 BEX4Q9NWD9 120 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-216ENST00000487043 PPP1R14DQ9NXH3 145 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 TBC1D14Q9P2M4 693 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 SLC25A10Q9UBX3 287 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-216ENST00000487043 TBC1D29Q9UFV1 150 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 SLC25A13Q9UJS0 675 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 ADAMTS5Q9UNA0 930 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 PSAT1Q9Y617 370 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 PIAS3Q9Y6X2 628 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 KIAA0232Q92628 1395 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 ABCC6O95255 1503 aa4.35□□□□□ -1.71
PTCD3-216ENST00000487043 TTC34A8MYJ7 566 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 HTATSF1O43719 755 aaKnown RBP4.34□□□□□ -1.71
PTCD3-216ENST00000487043 TJP3O95049 919 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 ZNF202O95125 648 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 METTL18O95568 372 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 TTLL1O95922 423 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 SCGB1D1O95968 90 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 CLEC3BP05452 202 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 URODP06132 367 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 ALDOCP09972 364 aaKnown RBP4.34□□□□□ -1.71
PTCD3-216ENST00000487043 ACADMP11310 421 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 CYP4B1P13584 511 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 ALOX12P18054 663 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 PTGS2P35354 604 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 STAT6P42226 847 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 VPS41P49754 854 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 EEFSECP57772 596 aaKnown RBP4.34□□□□□ -1.71
PTCD3-216ENST00000487043 RPS3AP61247 264 aaKnown RBP4.34□□□□□ -1.71
PTCD3-216ENST00000487043 WDR5P61964 334 aaKnown RBP4.34□□□□□ -1.71
PTCD3-216ENST00000487043 B4GALNT1Q00973 533 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 CFHR3Q02985 330 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 BYSLQ13895 437 aaKnown RBP4.34□□□□□ -1.71
PTCD3-216ENST00000487043 CNGA3Q16281 694 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 MTHFSDQ2M296 383 aaKnown RBP4.34□□□□□ -1.71
PTCD3-216ENST00000487043 RNASE12Q5GAN4 147 aaKnown RBP4.34□□□□□ -1.71
PTCD3-216ENST00000487043 LAIR1Q6GTX8 287 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 MTFR2Q6P444 385 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 RNF207Q6ZRF8 634 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 PXKQ7Z7A4 578 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 PEG10Q86TG7 708 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms