RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 C1QL1O75973 258 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 IPO13O94829 963 aaKnown RBP5.66□□□□□ -1.5
SF1-217ENST00000486960 FGBP02675 491 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 PRB1P04280 392 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 ZFYP08048 801 aaPredicted RBP5.66□□□□□ -1.5
SF1-217ENST00000486960 ENO2P09104 434 aaPredicted RBP5.66□□□□□ -1.5
SF1-217ENST00000486960 RALAP11233 206 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 PLA2G2AP14555 144 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 HOXC8P31273 242 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 CCR1P32246 355 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 NUP62P37198 522 aaPredicted RBP5.66□□□□□ -1.5
SF1-217ENST00000486960 SCNN1GP51170 649 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 PRRX1P54821 245 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 ARPC4P59998 168 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 CSNK2BP67870 215 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 TPM4P67936 248 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 CDK17Q00537 523 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 TAP2Q03519 686 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 GPM6BQ13491 265 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 CAPSQ13938 189 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 TTLL4Q14679 1199 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 MVPQ14764 893 aaKnown RBP5.66□□□□□ -1.5
SF1-217ENST00000486960 PTPAQ15257 358 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 FSCN1Q16658 493 aaKnown RBP5.66□□□□□ -1.5
SF1-217ENST00000486960 MEP1BQ16820 701 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 CYP27C1Q4G0S4 372 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 ZNF628Q5EBL2 1059 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 MDH1BQ5I0G3 518 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 SLC35F1Q5T1Q4 408 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 THEMIS2Q5TEJ8 643 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 EMC10Q5UCC4 262 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 GTF2IRD2BQ6EKJ0 949 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 ZNF600Q6ZNG1 722 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 MSANTD1Q6ZTZ1 278 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 H1FNTQ75WM6 255 aaPredicted RBP5.66□□□□□ -1.5
SF1-217ENST00000486960 COPS6Q7L5N1 327 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 OVCH1Q7RTY7 1134 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 MRPL10Q7Z7H8 261 aaKnown RBP5.66□□□□□ -1.5
SF1-217ENST00000486960 GTF2IRD2Q86UP8 949 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 FAM114A1Q8IWE2 563 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 SIRT2Q8IXJ6 389 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 CARFQ8N187 725 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 SIX6OS1Q8N1H7 587 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 PI4KAP1Q8N8J0 262 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 SUMF1Q8NBK3 374 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 ARRDC4Q8NCT1 418 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 NEK11Q8NG66 645 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 OR6Y1Q8NGX8 325 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 BAHD1Q8TBE0 780 aaPredicted RBP5.66□□□□□ -1.5
SF1-217ENST00000486960 SLC13A3Q8WWT9 602 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 KAT2BQ92831 832 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 RGMAQ96B86 450 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 APOPT1Q96IL0 206 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 MAML3Q96JK9 1138 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 HSH2DQ96JZ2 352 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 PRICKLE1Q96MT3 831 aaPredicted RBP5.66□□□□□ -1.5
SF1-217ENST00000486960 PNMA5Q96PV4 448 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 KCNK16Q96T55 309 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 EIF3CQ99613 913 aaKnown RBP5.66□□□□□ -1.5
SF1-217ENST00000486960 SPSB2Q99619 263 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 PRPF18Q99633 342 aaKnown RBP5.66□□□□□ -1.5
SF1-217ENST00000486960 RAD9AQ99638 391 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 RTKNQ9BST9 563 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 KLHL4Q9C0H6 718 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 MS4A5Q9H3V2 200 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 PRDM9Q9NQV7 894 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 LMBRD1Q9NUN5 540 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 CFAP97Q9P2B7 532 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 MARCH4Q9P2E8 410 aaPredicted RBP5.66□□□□□ -1.5
SF1-217ENST00000486960 TRMT112Q9UI30 125 aaKnown RBP5.66□□□□□ -1.5
SF1-217ENST00000486960 ATXN7L1Q9ULK2 861 aaPredicted RBP5.66□□□□□ -1.5
SF1-217ENST00000486960 TBC1D30Q9Y2I9 924 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 PTPRCP08575 1304 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 MYH3P11055 1940 aa5.66□□□□□ -1.5
SF1-217ENST00000486960 TANC1Q9C0D5 1861 aa5.65□□□□□ -1.5
SF1-217ENST00000486960 DENND3A2RUS2 1198 aa5.65□□□□□ -1.5
SF1-217ENST00000486960 PMS2P1A4D2B8 440 aa5.65□□□□□ -1.5
SF1-217ENST00000486960 SPDYE3A6NKU9 549 aa5.65□□□□□ -1.5
SF1-217ENST00000486960 TTI1O43156 1089 aa5.65□□□□□ -1.5
SF1-217ENST00000486960 PRPF4O43172 522 aaKnown RBP eCLIP5.65□□□□□ -1.54e-9■□□□□ 9.7
SF1-217ENST00000486960 ASNA1O43681 348 aa5.65□□□□□ -1.5
SF1-217ENST00000486960 LILRA1O75019 489 aa5.65□□□□□ -1.5
SF1-217ENST00000486960 NIPSNAP2O75323 286 aa5.65□□□□□ -1.5
SF1-217ENST00000486960 ENTPD3O75355 529 aa5.65□□□□□ -1.5
SF1-217ENST00000486960 SPAG6O75602 509 aa5.65□□□□□ -1.5
SF1-217ENST00000486960 F9P00740 461 aa5.65□□□□□ -1.5
SF1-217ENST00000486960 CST3P01034 146 aaPredicted RBP5.65□□□□□ -1.5
SF1-217ENST00000486960 PRKCBP05771 671 aa5.65□□□□□ -1.5
SF1-217ENST00000486960 IGKV5-2P06315 115 aa5.65□□□□□ -1.5
SF1-217ENST00000486960 FGF4P08620 206 aa5.65□□□□□ -1.5
SF1-217ENST00000486960 SLURP2P0DP57 97 aa5.65□□□□□ -1.5
SF1-217ENST00000486960 TXNP10599 105 aaKnown RBP5.65□□□□□ -1.5
SF1-217ENST00000486960 UBL4AP11441 157 aa5.65□□□□□ -1.5
SF1-217ENST00000486960 CCDC130P13994 396 aa5.65□□□□□ -1.5
SF1-217ENST00000486960 PTBP1P26599 531 aaKnown RBP eCLIP5.65□□□□□ -1.57e-6■□□□□ 9.8
SF1-217ENST00000486960 RPL9P32969 192 aaKnown RBP5.65□□□□□ -1.5
SF1-217ENST00000486960 PTGS2P35354 604 aa5.65□□□□□ -1.5
SF1-217ENST00000486960 PGM1P36871 562 aa5.65□□□□□ -1.5
SF1-217ENST00000486960 ECI1P42126 302 aa5.65□□□□□ -1.5
SF1-217ENST00000486960 CDK8P49336 464 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms