RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 NAXDQ8IW45 347 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 IFT20Q8IY31 132 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 DQX1Q8TE96 717 aaKnown RBP9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 MAIP1Q8WWC4 291 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 ZCCHC14Q8WYQ9 949 aaKnown RBP9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 FOXJ1Q92949 421 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 BIRC7Q96CA5 298 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 MRGPRX3Q96LB0 322 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 RHOXF2Q9BQY4 288 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 ORAI3Q9BRQ5 295 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 SLC2A11Q9BYW1 496 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 ACBD3Q9H3P7 528 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 CAAP1Q9H8G2 361 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 EBF2Q9HAK2 575 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 CNGB3Q9NQW8 809 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 OLA1Q9NTK5 396 aaKnown RBP9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 PARVAQ9NVD7 372 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 OGFRQ9NZT2 677 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 ADAM22Q9P0K1 906 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 MSRB2Q9Y3D2 182 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 NEUROG3Q9Y4Z2 214 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 PCDHA3Q9Y5H8 950 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 SNX11Q9Y5W9 270 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 PTPRBP23467 1997 aa9.66□□□□□ -0.86
TMEM39A-208ENST00000486159 ZZEF1O43149 2961 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 TTC34A8MYJ7 566 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 SIN3BO75182 1162 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 FSBPO95073 299 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 MOCS2O96007 188 aaPredicted RBP9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 ATXN1LP0C7T5 689 aaKnown RBP9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 VAV1P15498 845 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 GNSP15586 552 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 COMTP21964 271 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 CTNNA1P35221 906 aaKnown RBP9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 DPP6P42658 865 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 GPD2P43304 727 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 IRAK1P51617 712 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 METAP1P53582 386 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 GSCP56915 257 aaPredicted RBP9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 SNX16P57768 344 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 C2orf54Q08AI8 447 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 MESDQ14696 234 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 EIF4HQ15056 248 aaKnown RBP9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 KIF19Q2TAC6 998 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 SEL1L2Q5TEA6 688 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 HDXQ7Z353 690 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 MAATS1Q7Z4T9 603 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 TAC4Q86UU9 113 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 CIR1Q86X95 450 aaPredicted RBP9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 APCDD1Q8J025 514 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 CARNMT1Q8N4J0 409 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 CADM4Q8NFZ8 388 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 SETD7Q8WTS6 366 aaKnown RBP9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 SLC39A13Q96H72 371 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 VIPAS39Q9H9C1 493 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 ST7Q9NRC1 585 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 TM7SF3Q9NS93 570 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 TOR4AQ9NXH8 423 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 IP6K2Q9UHH9 426 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 SLCO3A1Q9UIG8 710 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 PCOLCE2Q9UKZ9 415 aa9.65□□□□□ -0.86
TMEM39A-208ENST00000486159 FAM47DPA6NHR8 397 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 PLK4O00444 970 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 KRIT1O00522 736 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 PAPSS1O43252 624 aaPredicted RBP9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 PSTPIP1O43586 416 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 TIMM44O43615 452 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 SPOPO43791 374 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 PROSCO94903 275 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 IGHV4-34P06331 123 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 DLDP09622 509 aaKnown RBP9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 POLR2EP19388 210 aaKnown RBP9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 OXTRP30559 389 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 CETN2P41208 172 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 CSKP41240 450 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 STK19P49842 368 aaPredicted RBP9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 PEX5P50542 639 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 CLDN6P56747 220 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 RWDD2BP57060 319 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 RING1Q06587 406 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 SCAPQ12770 1279 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 GPS2Q13227 327 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 LONRF2Q1L5Z9 754 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 DCAF6Q58WW2 860 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 ZC3H12AQ5D1E8 599 aaKnown RBP9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 MS4A13Q5J8X5 152 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 BEND6Q5SZJ8 279 aaPredicted RBP9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 RAP1GAP2Q684P5 730 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 C19orf48Q6RUI8 117 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 CCNI2Q6ZMN8 369 aaPredicted RBP9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 ERICH1Q86X53 443 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 MFN1Q8IWA4 741 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 AHI1Q8N157 1196 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 SCML4Q8N228 414 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 WDTC1Q8N5D0 677 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 MDM1Q8TC05 714 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 CPA5Q8WXQ8 436 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms