RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 IGSF22Q8N9C0 903 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 BIRC7Q96CA5 298 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 VCPIP1Q96JH7 1222 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 C8orf48Q96LL4 319 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 SLITRK1Q96PX8 696 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 SLC12A9Q9BXP2 914 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 ASCL3Q9NQ33 180 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 STARD5Q9NSY2 213 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 TMEM30AQ9NV96 361 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 GDAP2Q9NXN4 497 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 WDR35Q9P2L0 1181 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 THAP10Q9P2Z0 257 aaPredicted RBP6.93□□□□□ -1.3
SMC4-217ENST00000485867 CDH9Q9ULB4 789 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 AGAP1Q9UPQ3 857 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 PCDHA5Q9Y5H7 936 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 CYP46A1Q9Y6A2 500 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 PTPRJQ12913 1337 aa6.93□□□□□ -1.3
SMC4-217ENST00000485867 ITPR2Q14571 2701 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 RP1P56715 2156 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 NPHP3-ACAD11A0A0J9YXS1 232 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 CLEC18AA5D8T8 446 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 ENO4A6NNW6 628 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 NUDT19A8MXV4 375 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 TISP43B9A030 160 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 ANKRD63C9JTQ0 380 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 NPC1O15118 1278 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 YKT6O15498 198 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 SUV39H1O43463 412 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 SYNCRIPO60506 623 aaKnown RBP6.92□□□□□ -1.3
SMC4-217ENST00000485867 PFKFB2O60825 505 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 FSBPO95073 299 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 SEMA4FO95754 770 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 ITGB3P05106 788 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 IMPDH2P12268 514 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 CKMT2P17540 419 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 ACO1P21399 889 aaKnown RBP6.92□□□□□ -1.3
SMC4-217ENST00000485867 PRKCHP24723 683 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 LMO2P25791 158 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 EPHA8P29322 1005 aaPredicted RBP6.92□□□□□ -1.3
SMC4-217ENST00000485867 CACNA2D1P54289 1103 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 C21orf59P57076 290 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 GABREP78334 506 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 POU5F1Q01860 360 aaKnown RBP6.92□□□□□ -1.3
SMC4-217ENST00000485867 IFRD2Q12894 506 aaPredicted RBP6.92□□□□□ -1.3
SMC4-217ENST00000485867 MAPRE1Q15691 268 aaKnown RBP6.92□□□□□ -1.3
SMC4-217ENST00000485867 SOWAHAQ2M3V2 549 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 ANKRD39Q53RE8 183 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 HECTD3Q5T447 861 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 SFMBT2Q5VUG0 894 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 TDRD10Q5VZ19 366 aaKnown RBP6.92□□□□□ -1.3
SMC4-217ENST00000485867 CLEC18BQ6UXF7 455 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 CRELD2Q6UXH1 353 aaPredicted RBP6.92□□□□□ -1.3
SMC4-217ENST00000485867 RPTNQ6XPR3 784 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 TPGS1Q6ZTW0 290 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 HTR3DQ70Z44 454 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 NT5DC4Q86YG4 428 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 LSMEM2Q8N112 164 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 LRRC52Q8N7C0 313 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 C4orf32Q8N8J7 132 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 CLEC18CQ8NCF0 446 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 CXorf38Q8TB03 319 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 KBTBD7Q8WVZ9 684 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 P2RY11Q96G91 374 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 PCED1BQ96HM7 432 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 SRRTQ9BXP5 876 aaKnown RBP6.92□□□□□ -1.3
SMC4-217ENST00000485867 ACE2Q9BYF1 805 aaPredicted RBP6.92□□□□□ -1.3
SMC4-217ENST00000485867 LHX5Q9H2C1 402 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 CCSER2Q9H7U1 834 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 HSPBP1Q9NZL4 362 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 LARSQ9P2J5 1176 aaKnown RBP6.92□□□□□ -1.3
SMC4-217ENST00000485867 FBXO10Q9UK96 956 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 PAXBP1Q9Y5B6 917 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 SNX9Q9Y5X1 595 aa6.92□□□□□ -1.3
SMC4-217ENST00000485867 NYNRINQ9P2P1 1898 aaKnown RBP6.92□□□□□ -1.3
SMC4-217ENST00000485867 K7ENM7 598 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 IL18RAPO95256 599 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 WNT1P04628 370 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 IGHV4-34P06331 123 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 ITGB6P18564 788 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 ACP1P24666 158 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 YWHAQP27348 245 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 CCR10P46092 362 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 LSSP48449 732 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 TUBP50607 506 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 BCAT1P54687 386 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 SLC12A3P55017 1021 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 MFAP3P55082 362 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 CDH8P55286 799 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 RACK1P63244 317 aaKnown RBP6.91□□□□□ -1.3
SMC4-217ENST00000485867 TFAMQ00059 246 aaKnown RBP6.91□□□□□ -1.3
SMC4-217ENST00000485867 MVKQ03426 396 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 GRIN1Q05586 938 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 ZNF234Q14588 700 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 GEN1Q17RS7 908 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 LINC00303Q3SY05 128 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 TTC38Q5R3I4 469 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 KRT79Q5XKE5 535 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 ADALQ6DHV7 355 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 KANSL1Q7Z3B3 1105 aa6.91□□□□□ -1.3
SMC4-217ENST00000485867 LIMS2Q7Z4I7 341 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms