RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 CCDC105Q8IYK2 499 aa17.89■□□□□ 0.45
CHMP3-207ENST00000485465 ALLCQ8N6M5 410 aa17.89■□□□□ 0.45
CHMP3-207ENST00000485465 KDM1BQ8NB78 822 aa17.89■□□□□ 0.45
CHMP3-207ENST00000485465 USP33Q8TEY7 942 aa17.89■□□□□ 0.45
CHMP3-207ENST00000485465 MYO19Q96H55 970 aa17.89■□□□□ 0.45
CHMP3-207ENST00000485465 CCDC114Q96M63 670 aa17.89■□□□□ 0.45
CHMP3-207ENST00000485465 RUNDC3BQ96NL0 473 aa17.89■□□□□ 0.45
CHMP3-207ENST00000485465 CARD6Q9BX69 1037 aa17.89■□□□□ 0.45
CHMP3-207ENST00000485465 RRAGDQ9NQL2 400 aaPredicted RBP17.89■□□□□ 0.45
CHMP3-207ENST00000485465 RBM22Q9NW64 420 aaKnown RBP eCLIP17.89■□□□□ 0.45
CHMP3-207ENST00000485465 THAP10Q9P2Z0 257 aaPredicted RBP17.89■□□□□ 0.45
CHMP3-207ENST00000485465 SEPT3Q9UH03 358 aa17.89■□□□□ 0.45
CHMP3-207ENST00000485465 PCYOX1Q9UHG3 505 aa17.89■□□□□ 0.45
CHMP3-207ENST00000485465 FEZ2Q9UHY8 353 aaPredicted RBP17.89■□□□□ 0.45
CHMP3-207ENST00000485465 NDRG2Q9UN36 371 aaKnown RBP17.89■□□□□ 0.45
CHMP3-207ENST00000485465 MRPS17Q9Y2R5 130 aaKnown RBP17.89■□□□□ 0.45
CHMP3-207ENST00000485465 CTAGE15A4D2H0 777 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 C5orf60A6NFR6 353 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 SGK1O00141 431 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 RNF103O00237 685 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 ATP9BO43861 1147 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 STK10O94804 968 aaKnown RBP17.88■□□□□ 0.45
CHMP3-207ENST00000485465 TMCC1O94876 653 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 CTAGE8P0CG41 777 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 CHRM1P11229 460 aaPredicted RBP17.88■□□□□ 0.45
CHMP3-207ENST00000485465 MMP13P45452 471 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 GDF10P55107 478 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 SEC13P55735 322 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 CCINQ13939 588 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 ZNF234Q14588 700 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 FBXO43Q4G163 708 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 FNDC3BQ53EP0 1204 aaKnown RBP17.88■□□□□ 0.45
CHMP3-207ENST00000485465 TEX44Q53QW1 395 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 FAM182AQ5T1J6 154 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 GSTA5Q7RTV2 222 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 CTAGE6Q86UF2 777 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 CTAGE4Q8IX94 777 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 ZNF687Q8N1G0 1237 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 BBS5Q8N3I7 341 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 KCNV2Q8TDN2 545 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 GRK7Q8WTQ7 553 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 RTP4Q96DX8 246 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 ZNF419Q96HQ0 510 aaPredicted RBP17.88■□□□□ 0.45
CHMP3-207ENST00000485465 KRT12Q99456 494 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 VAT1Q99536 393 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 CINPQ9BW66 212 aaPredicted RBP17.88■□□□□ 0.45
CHMP3-207ENST00000485465 CEP41Q9BYV8 373 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 CEP44Q9C0F1 390 aa17.88■□□□□ 0.45
CHMP3-207ENST00000485465 FCF1Q9Y324 198 aaKnown RBP17.88■□□□□ 0.45
CHMP3-207ENST00000485465 KANSL1LA0AUZ9 987 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 NPC1O15118 1278 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 NEBLO76041 1014 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 TIE1P35590 1138 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 NRLP54845 237 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 ZNF235Q14590 738 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 DLG2Q15700 870 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 ACCSLQ4AC99 568 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 DGKKQ5KSL6 1271 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 ZNF567Q8N184 647 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 CNTD1Q8N815 330 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 ZNF513Q8N8E2 541 aaPredicted RBP17.87■□□□□ 0.45
CHMP3-207ENST00000485465 CCDC26Q8TAB7 109 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 FRS2Q8WU20 508 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 EDAQ92838 391 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 SLCO2A1Q92959 643 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 ISG20Q96AZ6 181 aaKnown RBP17.87■□□□□ 0.45
CHMP3-207ENST00000485465 TEKT5Q96M29 485 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 AGAP3Q96P47 875 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 PSKH2Q96QS6 385 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 NELL2Q99435 816 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 NT5MQ9NPB1 228 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 LTB4R2Q9NPC1 389 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 KLHL8Q9P2G9 620 aaPredicted RBP17.87■□□□□ 0.45
CHMP3-207ENST00000485465 LHX3Q9UBR4 397 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 AMACRQ9UHK6 382 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 TRHDEQ9UKU6 1024 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 SLC8A2Q9UPR5 921 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 ATP8A1Q9Y2Q0 1164 aa17.87■□□□□ 0.45
CHMP3-207ENST00000485465 TTC34A8MYJ7 566 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 ZNF821O75541 412 aaPredicted RBP17.86■□□□□ 0.45
CHMP3-207ENST00000485465 GCATO75600 419 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 ECEL1O95672 775 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 IFNB1P01574 187 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 HLA-DQB2P05538 268 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 CHRNB1P11230 501 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 TARSP26639 723 aaKnown RBP17.86■□□□□ 0.45
CHMP3-207ENST00000485465 HSPA9P38646 679 aaKnown RBP17.86■□□□□ 0.45
CHMP3-207ENST00000485465 IL12RB1P42701 662 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 PTGIRP43119 386 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 RHOAP61586 193 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 MRPS21P82921 87 aaKnown RBP17.86■□□□□ 0.45
CHMP3-207ENST00000485465 P3H1Q32P28 736 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 C2orf27AQ580R0 203 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 ANKRD20A2Q5SQ80 823 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 ANKRD20A1Q5TYW2 823 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 ANKRD20A3Q5VUR7 823 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 C22orf39Q6P5X5 142 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 PID1Q7Z2X4 250 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 PGBD5Q8N414 524 aa17.86■□□□□ 0.45
CHMP3-207ENST00000485465 PCDH20Q8N6Y1 951 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms