RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 PARP15Q460N3 678 aa16.55■□□□□ 0.24
DDR1-246ENST00000485023 BOLA3Q53S33 107 aa16.55■□□□□ 0.24
DDR1-246ENST00000485023 TRIM61Q5EBN2 209 aa16.55■□□□□ 0.24
DDR1-246ENST00000485023 SYCP2LQ5T4T6 812 aa16.55■□□□□ 0.24
DDR1-246ENST00000485023 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.55■□□□□ 0.24
DDR1-246ENST00000485023 DPY19L3Q6ZPD9 716 aa16.55■□□□□ 0.24
DDR1-246ENST00000485023 USP30Q70CQ3 517 aa16.55■□□□□ 0.24
DDR1-246ENST00000485023 PSTKQ8IV42 348 aaKnown RBP16.55■□□□□ 0.24
DDR1-246ENST00000485023 UMODL1-AS1Q8N2C9 162 aa16.55■□□□□ 0.24
DDR1-246ENST00000485023 ZCCHC9Q8N567 271 aaKnown RBP16.55■□□□□ 0.24
DDR1-246ENST00000485023 NPWQ8N729 165 aa16.55■□□□□ 0.24
DDR1-246ENST00000485023 SPC24Q8NBT2 197 aa16.55■□□□□ 0.24
DDR1-246ENST00000485023 SLC35G2Q8TBE7 412 aa16.55■□□□□ 0.24
DDR1-246ENST00000485023 FOXJ1Q92949 421 aa16.55■□□□□ 0.24
DDR1-246ENST00000485023 EIF3CQ99613 913 aaKnown RBP16.55■□□□□ 0.24
DDR1-246ENST00000485023 TFR2Q9UP52 801 aa16.55■□□□□ 0.24
DDR1-246ENST00000485023 FARP1Q9Y4F1 1045 aaPredicted RBP16.55■□□□□ 0.24
DDR1-246ENST00000485023 LNP1A1A4G5 178 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 SOWAHDA6NJG2 315 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 DFFAO00273 331 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 ZNF821O75541 412 aaPredicted RBP16.54■□□□□ 0.24
DDR1-246ENST00000485023 AMPD1P23109 780 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 GKP32189 559 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 DRD3P35462 400 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 CCNHP51946 323 aaPredicted RBP16.54■□□□□ 0.24
DDR1-246ENST00000485023 YBEYP58557 167 aaPredicted RBP16.54■□□□□ 0.24
DDR1-246ENST00000485023 IRX4P78413 519 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 SLC20A2Q08357 652 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 CNTN1Q12860 1018 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 DPYSQ14117 519 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 HADHQ16836 314 aaKnown RBP16.54■□□□□ 0.24
DDR1-246ENST00000485023 ARSIQ5FYB1 569 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 WDR45BQ5MNZ6 344 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 ATXN7L2Q5T6C5 722 aaPredicted RBP16.54■□□□□ 0.24
DDR1-246ENST00000485023 FAM46CQ5VWP2 391 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 NCEH1Q6PIU2 408 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 PCDH20Q8N6Y1 951 aaKnown RBP16.54■□□□□ 0.24
DDR1-246ENST00000485023 CADM4Q8NFZ8 388 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 OR14C36Q8NHC7 312 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 RMDN1Q96DB5 314 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 CSPG4P5Q96PW8 444 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 EDEM2Q9BV94 578 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 CEP44Q9C0F1 390 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 SLC39A8Q9C0K1 460 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 ZDHHC6Q9H6R6 413 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 SGK2Q9HBY8 427 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 PCDH18Q9HCL0 1135 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 IL36AQ9UHA7 158 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 EIF2B4Q9UI10 523 aaKnown RBP16.54■□□□□ 0.24
DDR1-246ENST00000485023 CDV3Q9UKY7 258 aaKnown RBP16.54■□□□□ 0.24
DDR1-246ENST00000485023 PPM1HQ9ULR3 514 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 CFAP54Q96N23 3096 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 SDK1Q7Z5N4 2213 aa16.54■□□□□ 0.24
DDR1-246ENST00000485023 METTL12A8MUP2 240 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 J3KR12 359 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 ALOX15BO15296 676 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 TMCC1O94876 653 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 CD48P09326 243 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 C7P10643 843 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 MAGEA1P43355 309 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 MAPK8P45983 427 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 PAPOLAP51003 745 aaKnown RBP16.53■□□□□ 0.24
DDR1-246ENST00000485023 ADPRHP54922 357 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 CDH6P55285 790 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 GEMIN4P57678 1058 aaKnown RBP16.53■□□□□ 0.24
DDR1-246ENST00000485023 SFSWAPQ12872 951 aaKnown RBP16.53■□□□□ 0.24
DDR1-246ENST00000485023 MMRN1Q13201 1228 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 SERINC3Q13530 473 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 ATP13A4Q4VNC1 1196 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 CARD16Q5EG05 197 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 ZFYVE27Q5T4F4 411 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 ARHGAP36Q6ZRI8 547 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 TP53INP2Q8IXH6 220 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 TEKT4Q8WW24 435 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 RFFLQ8WZ73 363 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 ARRDC3Q96B67 414 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 BIRC7Q96CA5 298 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 EXOC2Q96KP1 924 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 LRRC19Q9H756 370 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 ETNK2Q9NVF9 386 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 HECAQ9UBI9 543 aaPredicted RBP16.53■□□□□ 0.24
DDR1-246ENST00000485023 FZD4Q9ULV1 537 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.53■□□□□ 0.24
DDR1-246ENST00000485023 SLCO1B1Q9Y6L6 691 aa16.53■□□□□ 0.24
DDR1-246ENST00000485023 LEFTY1O75610 366 aa16.52■□□□□ 0.24
DDR1-246ENST00000485023 PRNPP04156 253 aa16.52■□□□□ 0.24
DDR1-246ENST00000485023 TNNT1P13805 278 aa16.52■□□□□ 0.24
DDR1-246ENST00000485023 NDST2P52849 883 aa16.52■□□□□ 0.24
DDR1-246ENST00000485023 SPA17Q15506 151 aa16.52■□□□□ 0.24
DDR1-246ENST00000485023 PEAR1Q5VY43 1037 aaPredicted RBP16.52■□□□□ 0.24
DDR1-246ENST00000485023 KIAA0895LQ68EN5 471 aa16.52■□□□□ 0.24
DDR1-246ENST00000485023 POLNQ7Z5Q5 900 aa16.52■□□□□ 0.24
DDR1-246ENST00000485023 ARHGAP12Q8IWW6 846 aa16.52■□□□□ 0.24
DDR1-246ENST00000485023 PANX2Q96RD6 677 aa16.52■□□□□ 0.24
DDR1-246ENST00000485023 NUSAP1Q9BXS6 441 aaKnown RBP16.52■□□□□ 0.24
DDR1-246ENST00000485023 CALN1Q9BXU9 219 aa16.52■□□□□ 0.24
DDR1-246ENST00000485023 SP110Q9HB58 689 aa16.52■□□□□ 0.24
DDR1-246ENST00000485023 DYRK4Q9NR20 520 aa16.52■□□□□ 0.24
DDR1-246ENST00000485023 UBA2Q9UBT2 640 aaPredicted RBP16.52■□□□□ 0.24
DDR1-246ENST00000485023 HYOU1Q9Y4L1 999 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms