RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 SLC5A5Q92911 643 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 GSAPA4D1B5 854 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 MAGEC1O60732 1142 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 MYCLP1P12525 358 aaPredicted RBP10.38□□□□□ -0.75
COL12A1-207ENST00000483888 RPP38P78345 283 aaKnown RBP10.38□□□□□ -0.75
COL12A1-207ENST00000483888 C16orf46Q6P387 395 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 TMEM17Q86X19 198 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 AFG1LQ8WV93 481 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 VPS35Q96QK1 796 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 PIDD1Q9HB75 910 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 BCKDKO14874 412 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 MTHFRP42898 656 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 MTMR2Q13614 643 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 THAP5Q7Z6K1 395 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 CABLES1Q8TDN4 633 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 SYT15Q9BQS2 421 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 PHF23Q9BUL5 403 aaPredicted RBP10.38□□□□□ -0.75
COL12A1-207ENST00000483888 POLIQ9UNA4 740 aa10.38□□□□□ -0.75
COL12A1-207ENST00000483888 UGT2B11O75310 529 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 FAM86B2P0C5J1 330 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 OR52K2Q8NGK3 314 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 ZNF431Q8TF32 576 aaPredicted RBP10.37□□□□□ -0.75
COL12A1-207ENST00000483888 FAM136AQ96C01 138 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 FAM105AQ9NUU6 356 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 SLC25A13Q9UJS0 675 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 H3BSA7 217 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 SGPL1O95470 568 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 MOCS2O96007 188 aaPredicted RBP10.37□□□□□ -0.75
COL12A1-207ENST00000483888 NUDT7P0C024 238 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 ZRANB3Q5FWF4 1079 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 PTF1AQ7RTS3 328 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 GALNT5Q7Z7M9 940 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 NT5DC3Q86UY8 548 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 AMIGO1Q86WK6 493 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 RAB42Q8N4Z0 105 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 CLEC4AQ9UMR7 237 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 USP17L15C9J2P7 530 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 USP17L13C9JLJ4 530 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 USP17L11C9JVI0 530 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 USP17L18D6R9N7 530 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 USP17L22D6RA61 530 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 USP17L17D6RBQ6 530 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 USP17L19D6RCP7 530 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 USP17L20D6RJB6 530 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 TIE1P35590 1138 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 USP17L24Q0WX57 530 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 NODALQ96S42 347 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 NPAS2Q99743 824 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 UBQLN2Q9UHD9 624 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 VANGL2Q9ULK5 521 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 AP4E1Q9UPM8 1137 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 ABCB11O95342 1321 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 NFKB1P19838 968 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 TCEA1P23193 301 aaKnown RBP10.37□□□□□ -0.75
COL12A1-207ENST00000483888 FAM91A1Q658Y4 838 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 SGMS1Q86VZ5 419 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 SSX3Q99909 188 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 RIOK2Q9BVS4 552 aaKnown RBP10.37□□□□□ -0.75
COL12A1-207ENST00000483888 ITGA11Q9UKX5 1188 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 NDUFS2O75306 463 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 CRTAMO95727 393 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 PSMA1P25786 263 aaKnown RBP10.37□□□□□ -0.75
COL12A1-207ENST00000483888 SMPD3Q9NY59 655 aaPredicted RBP10.37□□□□□ -0.75
COL12A1-207ENST00000483888 PHF24Q9UPV7 400 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 LYVE1Q9Y5Y7 322 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 USP17L5A8MUK1 530 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 EDF1O60869 148 aaKnown RBP10.37□□□□□ -0.75
COL12A1-207ENST00000483888 LRIG2O94898 1065 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 CTDNEP1O95476 244 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 GH1P01241 217 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 RB1P06400 928 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 NFICP08651 508 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 PRG2P13727 222 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 MTMR1Q13613 665 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 ZBED5Q49AG3 693 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 GPAT2Q6NUI2 795 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 TMEM8AQ9HCN3 771 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 COQ3Q9NZJ6 369 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 ALG5Q9Y673 324 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 KCNE2Q9Y6J6 123 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 PIGNO95427 931 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 OMPP47874 163 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 OR5J2Q8NH18 312 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 CCDC17Q96LX7 622 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 BHLHE41Q9C0J9 482 aaPredicted RBP10.37□□□□□ -0.75
COL12A1-207ENST00000483888 FANCFQ9NPI8 374 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 TEX46H3BTG2 121 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 MAGEB3O15480 346 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 EYA4O95677 639 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 IFNGR2P38484 337 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 AFF1P51825 1210 aaKnown RBP10.37□□□□□ -0.75
COL12A1-207ENST00000483888 AP3M2P53677 418 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 MSANTD1Q6ZTZ1 278 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 PI4K2AQ9BTU6 479 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 LRRC4BQ9NT99 713 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 QPCTLQ9NXS2 382 aa10.37□□□□□ -0.75
COL12A1-207ENST00000483888 GNG14A0A1W2PPG7 69 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 STX16-NPEPL1H3BU86 382 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 STX16O14662 325 aa10.36□□□□□ -0.75
COL12A1-207ENST00000483888 SLC22A1O15245 554 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms