RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 USP1O94782 785 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 POLBP06746 335 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 MMP2P08253 660 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 IRF1P10914 325 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 KRT15P19012 456 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 HOXA9P31269 272 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 CYP4F8P98187 520 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 NIPAL4Q0D2K0 466 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 ZNF177Q13360 481 aaPredicted RBP14.28□□□□□ -0.12
CLK3-204ENST00000483723 LBRQ14739 615 aaKnown RBP14.28□□□□□ -0.12
CLK3-204ENST00000483723 CRYMQ14894 314 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 PPM1LQ5SGD2 360 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 CERCAMQ5T4B2 595 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 PDE12Q6L8Q7 609 aaKnown RBP14.28□□□□□ -0.12
CLK3-204ENST00000483723 SH2D5Q6ZV89 423 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 MARK2Q7KZI7 788 aaKnown RBP14.28□□□□□ -0.12
CLK3-204ENST00000483723 SPRED2Q7Z698 418 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 PGBD5Q8N414 524 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 PPM1NQ8N819 430 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 DNAAF3Q8N9W5 541 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 ARRDC2Q8TBH0 407 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 DENND1AQ8TEH3 1009 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 MRRFQ96E11 262 aaKnown RBP14.28□□□□□ -0.12
CLK3-204ENST00000483723 MRGPRX2Q96LB1 330 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 FCRL3Q96P31 734 aaPredicted RBP14.28□□□□□ -0.12
CLK3-204ENST00000483723 EPN3Q9H201 632 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 NT5MQ9NPB1 228 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 VPS45Q9NRW7 570 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 SOX13Q9UN79 622 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 ZNF510Q9Y2H8 683 aa14.28□□□□□ -0.12
CLK3-204ENST00000483723 ZCWPW2A0A1B0GU75 182 aa14.27□□□□□ -0.12
CLK3-204ENST00000483723 SOBPA7XYQ1 873 aa14.27□□□□□ -0.12
CLK3-204ENST00000483723 CLASP2O75122 1294 aaKnown RBP14.27□□□□□ -0.12
CLK3-204ENST00000483723 FGF19O95750 216 aa14.27□□□□□ -0.12
CLK3-204ENST00000483723 INHBAP08476 426 aa14.27□□□□□ -0.12
CLK3-204ENST00000483723 MYOGP15173 224 aa14.27□□□□□ -0.12
CLK3-204ENST00000483723 IRS1P35568 1242 aa14.27□□□□□ -0.12
CLK3-204ENST00000483723 NAB1Q13506 487 aa14.27□□□□□ -0.12
CLK3-204ENST00000483723 IHHQ14623 411 aa14.27□□□□□ -0.12
CLK3-204ENST00000483723 TMCO4Q5TGY1 634 aa14.27□□□□□ -0.12
CLK3-204ENST00000483723 ALG1LQ6GMV1 187 aa14.27□□□□□ -0.12
CLK3-204ENST00000483723 CXorf57Q6NSI4 855 aaKnown RBP14.27□□□□□ -0.12
CLK3-204ENST00000483723 CASC4Q6P4E1 433 aa14.27□□□□□ -0.12
CLK3-204ENST00000483723 CPXM2Q8N436 756 aa14.27□□□□□ -0.12
CLK3-204ENST00000483723 MAB21L3Q8N8X9 362 aa14.27□□□□□ -0.12
CLK3-204ENST00000483723 OR7D4Q8NG98 312 aa14.27□□□□□ -0.12
CLK3-204ENST00000483723 SAMD11Q96NU1 681 aa14.27□□□□□ -0.12
CLK3-204ENST00000483723 KIFC1Q9BW19 673 aa14.27□□□□□ -0.12
CLK3-204ENST00000483723 SLC46A2Q9BY10 475 aa14.27□□□□□ -0.12
CLK3-204ENST00000483723 ATXN3LQ9H3M9 355 aa14.27□□□□□ -0.12
CLK3-204ENST00000483723 ASAH2Q9NR71 780 aa14.27□□□□□ -0.12
CLK3-204ENST00000483723 INTS9Q9NV88 658 aaKnown RBP14.27□□□□□ -0.12
CLK3-204ENST00000483723 SAMD15Q9P1V8 674 aa14.27□□□□□ -0.12
CLK3-204ENST00000483723 TRAV19A0A0A6YYK7 116 aa14.27□□□□□ -0.13
CLK3-204ENST00000483723 CCL16O15467 120 aa14.27□□□□□ -0.13
CLK3-204ENST00000483723 TYROBPO43914 113 aa14.27□□□□□ -0.13
CLK3-204ENST00000483723 MOSPD3O75425 235 aa14.27□□□□□ -0.13
CLK3-204ENST00000483723 NEBLO76041 1014 aa14.27□□□□□ -0.13
CLK3-204ENST00000483723 PTPN2P17706 415 aa14.27□□□□□ -0.13
CLK3-204ENST00000483723 WNT3AP56704 352 aa14.27□□□□□ -0.13
CLK3-204ENST00000483723 SLC18A2Q05940 514 aa14.27□□□□□ -0.13
CLK3-204ENST00000483723 MGAT5Q09328 741 aa14.27□□□□□ -0.13
CLK3-204ENST00000483723 ANKRD20A4Q4UJ75 823 aa14.27□□□□□ -0.13
CLK3-204ENST00000483723 CNPY4Q8N129 248 aa14.27□□□□□ -0.13
CLK3-204ENST00000483723 ALKBH8Q96BT7 664 aaKnown RBP14.27□□□□□ -0.13
CLK3-204ENST00000483723 PABPC5Q96DU9 382 aaKnown RBP14.27□□□□□ -0.13
CLK3-204ENST00000483723 APOL2Q9BQE5 337 aa14.27□□□□□ -0.13
CLK3-204ENST00000483723 CORO1BQ9BR76 489 aa14.27□□□□□ -0.13
CLK3-204ENST00000483723 FICDQ9BVA6 458 aa14.27□□□□□ -0.13
CLK3-204ENST00000483723 SMG5Q9UPR3 1016 aaKnown RBP14.27□□□□□ -0.13
CLK3-204ENST00000483723 IKBKGQ9Y6K9 419 aa14.27□□□□□ -0.13
CLK3-204ENST00000483723 RPS6KL1Q9Y6S9 549 aa14.27□□□□□ -0.13
CLK3-204ENST00000483723 GBF1Q92538 1859 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 HELZP42694 1942 aaKnown RBP14.26□□□□□ -0.13
CLK3-204ENST00000483723 NOTCH4Q99466 2003 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 A0A1W2PRU2 124 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 TSPAN3O60637 253 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 LPXNO60711 386 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 RHOCP08134 193 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 SNRPAP09012 282 aaKnown RBP14.26□□□□□ -0.13
CLK3-204ENST00000483723 POU2F2P09086 479 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 HNRNPA1P09651 372 aaKnown RBP eCLIP14.26□□□□□ -0.13
CLK3-204ENST00000483723 MYL4P12829 197 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 TPH1P17752 444 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 DDX6P26196 483 aaKnown RBP eCLIP14.26□□□□□ -0.13
CLK3-204ENST00000483723 ETFBP38117 255 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 CCR2P41597 374 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 SERPINB9P50453 376 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 ERVK-21P61565 698 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 MSLNQ13421 630 aaPredicted RBP14.26□□□□□ -0.13
CLK3-204ENST00000483723 RFTN1Q14699 578 aaPredicted RBP14.26□□□□□ -0.13
CLK3-204ENST00000483723 SLC14A2Q15849 920 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 PCID2Q5JVF3 399 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 C9orf50Q5SZB4 431 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 LGSNQ5TDP6 509 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 RNF43Q68DV7 783 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 POTEHQ6S545 545 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 CTAGE3PQ8IX95 158 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 UNC5BQ8IZJ1 945 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 HJURPQ8NCD3 748 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms