RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 BUB1BO60566 1050 aaPredicted RBP16.9■□□□□ 0.3
HMGN1-214ENST00000482733 PRAMEF11O60813 436 aa16.9■□□□□ 0.3
HMGN1-214ENST00000482733 ZNF821O75541 412 aaPredicted RBP16.9■□□□□ 0.3
HMGN1-214ENST00000482733 GSRP00390 522 aa16.9■□□□□ 0.3
HMGN1-214ENST00000482733 PRNPP04156 253 aa16.9■□□□□ 0.3
HMGN1-214ENST00000482733 COMTP21964 271 aa16.9■□□□□ 0.3
HMGN1-214ENST00000482733 IL4RP24394 825 aa16.9■□□□□ 0.3
HMGN1-214ENST00000482733 CHRNA3P32297 505 aa16.9■□□□□ 0.3
HMGN1-214ENST00000482733 DHPSP49366 369 aaPredicted RBP16.9■□□□□ 0.3
HMGN1-214ENST00000482733 SNRPD1P62314 119 aaKnown RBP16.9■□□□□ 0.3
HMGN1-214ENST00000482733 DPYSL3Q14195 570 aa16.9■□□□□ 0.3
HMGN1-214ENST00000482733 ATP13A4Q4VNC1 1196 aa16.9■□□□□ 0.3
HMGN1-214ENST00000482733 ODF2Q5BJF6 829 aa16.9■□□□□ 0.3
HMGN1-214ENST00000482733 CARD16Q5EG05 197 aa16.9■□□□□ 0.3
HMGN1-214ENST00000482733 LYSMD4Q5XG99 296 aa16.9■□□□□ 0.3
HMGN1-214ENST00000482733 C11orf63Q6NUN7 778 aa16.9■□□□□ 0.3
HMGN1-214ENST00000482733 VSIG1Q86XK7 387 aa16.9■□□□□ 0.3
HMGN1-214ENST00000482733 ARHGAP12Q8IWW6 846 aa16.9■□□□□ 0.3
HMGN1-214ENST00000482733 TMEFF1Q8IYR6 380 aa16.9■□□□□ 0.3
HMGN1-214ENST00000482733 ACRBPQ8NEB7 543 aa16.9■□□□□ 0.3
HMGN1-214ENST00000482733 ZNF419Q96HQ0 510 aaPredicted RBP16.9■□□□□ 0.3
HMGN1-214ENST00000482733 OMDQ99983 421 aa16.9■□□□□ 0.3
HMGN1-214ENST00000482733 TNKS2Q9H2K2 1166 aa16.9■□□□□ 0.3
HMGN1-214ENST00000482733 CD93Q9NPY3 652 aa16.9■□□□□ 0.3
HMGN1-214ENST00000482733 DDX56Q9NY93 547 aaKnown RBP16.9■□□□□ 0.3
HMGN1-214ENST00000482733 UBA2Q9UBT2 640 aaPredicted RBP16.9■□□□□ 0.3
HMGN1-214ENST00000482733 FCF1Q9Y324 198 aaKnown RBP16.9■□□□□ 0.3
HMGN1-214ENST00000482733 ALG6Q9Y672 507 aa16.9■□□□□ 0.3
HMGN1-214ENST00000482733 USP34Q70CQ2 3546 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 PIEZO1Q92508 2521 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 ZNF487B1APH4 448 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 DFFAO00273 331 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 PSTPIP1O43586 416 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 FOXD2O60548 495 aaPredicted RBP16.89■□□□□ 0.29
HMGN1-214ENST00000482733 RNASEH2AO75792 299 aaKnown RBP16.89■□□□□ 0.29
HMGN1-214ENST00000482733 CD48P09326 243 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 KDELR1P24390 212 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 DNA2P51530 1060 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 NAP1L1P55209 391 aaKnown RBP16.89■□□□□ 0.29
HMGN1-214ENST00000482733 CCDC15Q0P6D6 951 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 KIF5AQ12840 1032 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 IFI16Q16666 785 aaKnown RBP16.89■□□□□ 0.29
HMGN1-214ENST00000482733 ANKRD20A8PQ5CZ79 823 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 DPY19L3Q6ZPD9 716 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 CYP2U1Q7Z449 544 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 FAM124AQ86V42 546 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 LRRC49Q8IUZ0 686 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 HDDC3Q8N4P3 179 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 NPWQ8N729 165 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 PIP4K2CQ8TBX8 421 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 FAF2Q96CS3 445 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 LRIG1Q96JA1 1093 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 HEPHQ9BQS7 1158 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 GPR174Q9BXC1 333 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 ARRDC1-AS1Q9H2J1 176 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 SP110Q9HB58 689 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 PDFQ9HBH1 243 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 IL36AQ9UHA7 158 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 TFR2Q9UP52 801 aa16.89■□□□□ 0.29
HMGN1-214ENST00000482733 A0A1W2PP55 124 aa16.88■□□□□ 0.29
HMGN1-214ENST00000482733 BCLAF3A2AJT9 711 aaKnown RBP16.88■□□□□ 0.29
HMGN1-214ENST00000482733 RCCD1A6NED2 376 aa16.88■□□□□ 0.29
HMGN1-214ENST00000482733 ARHGAP6O43182 974 aa16.88■□□□□ 0.29
HMGN1-214ENST00000482733 SLC7A4O43246 635 aa16.88■□□□□ 0.29
HMGN1-214ENST00000482733 NRDCO43847 1150 aa16.88■□□□□ 0.29
HMGN1-214ENST00000482733 TMCC1O94876 653 aa16.88■□□□□ 0.29
HMGN1-214ENST00000482733 HOXD12P35452 270 aa16.88■□□□□ 0.29
HMGN1-214ENST00000482733 CCNHP51946 323 aaPredicted RBP16.88■□□□□ 0.29
HMGN1-214ENST00000482733 CREB5Q02930 508 aa16.88■□□□□ 0.29
HMGN1-214ENST00000482733 ZNF33AQ06730 810 aa16.88■□□□□ 0.29
HMGN1-214ENST00000482733 IL10RBQ08334 325 aa16.88■□□□□ 0.29
HMGN1-214ENST00000482733 MMRN1Q13201 1228 aa16.88■□□□□ 0.29
HMGN1-214ENST00000482733 RFTN1Q14699 578 aaPredicted RBP16.88■□□□□ 0.29
HMGN1-214ENST00000482733 WDR45BQ5MNZ6 344 aa16.88■□□□□ 0.29
HMGN1-214ENST00000482733 SYCP2LQ5T4T6 812 aa16.88■□□□□ 0.29
HMGN1-214ENST00000482733 TMCO4Q5TGY1 634 aa16.88■□□□□ 0.29
HMGN1-214ENST00000482733 OR2AP1Q8NGE2 309 aa16.88■□□□□ 0.29
HMGN1-214ENST00000482733 TPCN2Q8NHX9 752 aa16.88■□□□□ 0.29
HMGN1-214ENST00000482733 RAPGEF5Q92565 580 aa16.88■□□□□ 0.29
HMGN1-214ENST00000482733 PPP1R16AQ96I34 528 aa16.88■□□□□ 0.29
HMGN1-214ENST00000482733 ZNF599Q96NL3 588 aa16.88■□□□□ 0.29
HMGN1-214ENST00000482733 ETNK2Q9NVF9 386 aa16.88■□□□□ 0.29
HMGN1-214ENST00000482733 KLHL11Q9NVR0 708 aa16.88■□□□□ 0.29
HMGN1-214ENST00000482733 HECAQ9UBI9 543 aaPredicted RBP16.88■□□□□ 0.29
HMGN1-214ENST00000482733 IPO11Q9UI26 975 aaKnown RBP16.88■□□□□ 0.29
HMGN1-214ENST00000482733 ACTL7AQ9Y615 435 aa16.88■□□□□ 0.29
HMGN1-214ENST00000482733 LRRD1A4D1F6 860 aa16.87■□□□□ 0.29
HMGN1-214ENST00000482733 LRRC72A6NJI9 287 aa16.87■□□□□ 0.29
HMGN1-214ENST00000482733 J3KR12 359 aa16.87■□□□□ 0.29
HMGN1-214ENST00000482733 POP4O95707 220 aaKnown RBP16.87■□□□□ 0.29
HMGN1-214ENST00000482733 SEMA4FO95754 770 aa16.87■□□□□ 0.29
HMGN1-214ENST00000482733 IGSF6O95976 241 aa16.87■□□□□ 0.29
HMGN1-214ENST00000482733 ACSL1P33121 698 aa16.87■□□□□ 0.29
HMGN1-214ENST00000482733 MPLP40238 635 aa16.87■□□□□ 0.29
HMGN1-214ENST00000482733 PTGER3P43115 390 aa16.87■□□□□ 0.29
HMGN1-214ENST00000482733 RHOAP61586 193 aa16.87■□□□□ 0.29
HMGN1-214ENST00000482733 RAD51Q06609 339 aa16.87■□□□□ 0.29
HMGN1-214ENST00000482733 PAFAH1B3Q15102 231 aaKnown RBP16.87■□□□□ 0.29
HMGN1-214ENST00000482733 CSRP2Q16527 193 aa16.87■□□□□ 0.29
HMGN1-214ENST00000482733 LEKR1Q6ZMV7 388 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms