RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 HPS4Q9NQG7 708 aa12.74□□□□□ -0.37
IFT88-206ENST00000482172 EIF2B3Q9NR50 452 aaKnown RBP12.74□□□□□ -0.37
IFT88-206ENST00000482172 RAB6BQ9NRW1 208 aa12.74□□□□□ -0.37
IFT88-206ENST00000482172 ABCB8Q9NUT2 735 aa12.74□□□□□ -0.37
IFT88-206ENST00000482172 ARGLU1Q9NWB6 273 aaPredicted RBP12.74□□□□□ -0.37
IFT88-206ENST00000482172 UBA2Q9UBT2 640 aaPredicted RBP12.74□□□□□ -0.37
IFT88-206ENST00000482172 MTRF1LQ9UGC7 380 aaKnown RBP12.74□□□□□ -0.37
IFT88-206ENST00000482172 SEPT3Q9UH03 358 aa12.74□□□□□ -0.37
IFT88-206ENST00000482172 GGA2Q9UJY4 613 aa12.74□□□□□ -0.37
IFT88-206ENST00000482172 NFU1Q9UMS0 254 aa12.74□□□□□ -0.37
IFT88-206ENST00000482172 SHOC2Q9UQ13 582 aa12.74□□□□□ -0.37
IFT88-206ENST00000482172 SLC27A6Q9Y2P4 619 aa12.74□□□□□ -0.37
IFT88-206ENST00000482172 GOLGA6CA6NDK9 693 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 GOLGA6BA6NDN3 693 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 ERI2A8K979 691 aaKnown RBP12.73□□□□□ -0.37
IFT88-206ENST00000482172 CISD3P0C7P0 127 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 GOLGA6DP0CG33 693 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 PABPC1P11940 636 aaKnown RBP12.73□□□□□ -0.37
IFT88-206ENST00000482172 TPSB2P20231 275 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 CES1P23141 567 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 CD70P32970 193 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 EIF2DP41214 584 aaKnown RBP12.73□□□□□ -0.37
IFT88-206ENST00000482172 PLTPP55058 493 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 BASP1P80723 227 aaKnown RBP12.73□□□□□ -0.37
IFT88-206ENST00000482172 ARF5P84085 180 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 CDK16Q00536 496 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 SLC10A7Q0GE19 358 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 CBLBQ13191 982 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 PRPSAP1Q14558 356 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 KCNJ11Q14654 390 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 TPSAB1Q15661 275 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 GAB4Q2WGN9 574 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 PITRM1Q5JRX3 1037 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 EMBQ6PCB8 327 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 CEP128Q6ZU80 1094 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 APCDD1Q8J025 514 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 AHI1Q8N157 1196 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 NAT8LQ8N9F0 302 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 MCUQ8NE86 351 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 PRCCQ92733 491 aaPredicted RBP12.73□□□□□ -0.37
IFT88-206ENST00000482172 ZFYVE19Q96K21 471 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 AGAP3Q96P47 875 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 PSKH2Q96QS6 385 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 FRMD8Q9BZ67 464 aaPredicted RBP12.73□□□□□ -0.37
IFT88-206ENST00000482172 PHACTR1Q9C0D0 580 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 GLOD4Q9HC38 313 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 TRPV5Q9NQA5 729 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 GOLGA6AQ9NYA3 693 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 RSPH14Q9UHP6 348 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 VPS51Q9UID3 782 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 INTS6Q9UL03 887 aaKnown RBP12.73□□□□□ -0.37
IFT88-206ENST00000482172 FAM50BQ9Y247 325 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 NUMBLQ9Y6R0 609 aa12.73□□□□□ -0.37
IFT88-206ENST00000482172 C2CD4DB7Z1M9 353 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 ARNTLO00327 626 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 SNAP91O60641 907 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 ANXA9O76027 345 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 CD160O95971 181 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 HLA-DQB2P05538 268 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 MYBL2P10244 700 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 NFKB1P19838 968 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 GLDCP23378 1020 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 PSMB4P28070 264 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 GDI1P31150 447 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 DGKGP49619 791 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 GRM2Q14416 872 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 ZNF235Q14590 738 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 SLC14A2Q15849 920 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 KCTD19Q17RG1 926 aaPredicted RBP12.72□□□□□ -0.37
IFT88-206ENST00000482172 PREPLQ4J6C6 727 aaPredicted RBP12.72□□□□□ -0.37
IFT88-206ENST00000482172 RALGPS1Q5JS13 557 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 ALG1LQ6GMV1 187 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 ASTLQ6HA08 431 aaPredicted RBP12.72□□□□□ -0.37
IFT88-206ENST00000482172 PPP1R21Q6ZMI0 780 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 FBXO25Q8TCJ0 367 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 USP33Q8TEY7 942 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 AENQ8WTP8 325 aaKnown RBP12.72□□□□□ -0.37
IFT88-206ENST00000482172 ANKRD7Q92527 254 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 TTC17Q96AE7 1141 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 FMO2Q99518 471 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 MGME1Q9BQP7 344 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 RPP25Q9BUL9 199 aaKnown RBP12.72□□□□□ -0.37
IFT88-206ENST00000482172 CEP41Q9BYV8 373 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 POLR1EQ9GZS1 481 aaKnown RBP12.72□□□□□ -0.37
IFT88-206ENST00000482172 SLC25A51Q9H1U9 297 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 NEUROG2Q9H2A3 272 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 AAR2Q9Y312 384 aaKnown RBP12.72□□□□□ -0.37
IFT88-206ENST00000482172 SHROOM3Q8TF72 1996 aa12.72□□□□□ -0.37
IFT88-206ENST00000482172 OTOL1A6NHN0 477 aaPredicted RBP12.71□□□□□ -0.37
IFT88-206ENST00000482172 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.71□□□□□ -0.37
IFT88-206ENST00000482172 E7EVH7 732 aa12.71□□□□□ -0.37
IFT88-206ENST00000482172 TIMM44O43615 452 aa12.71□□□□□ -0.37
IFT88-206ENST00000482172 PPFIA2O75334 1257 aa12.71□□□□□ -0.37
IFT88-206ENST00000482172 TULP3O75386 442 aa12.71□□□□□ -0.37
IFT88-206ENST00000482172 GEMP55040 296 aa12.71□□□□□ -0.37
IFT88-206ENST00000482172 SARNPP82979 210 aaKnown RBP12.71□□□□□ -0.37
IFT88-206ENST00000482172 NSUN2Q08J23 767 aaKnown RBP eCLIP12.71□□□□□ -0.37
IFT88-206ENST00000482172 CYTH1Q15438 398 aa12.71□□□□□ -0.37
IFT88-206ENST00000482172 ITPRIPL2Q3MIP1 535 aa12.71□□□□□ -0.37
IFT88-206ENST00000482172 FUT11Q495W5 492 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms