RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 KELP23276 732 aa6.12□□□□□ -1.43
SF3B1-210ENST00000482158 EPHA8P29322 1005 aaPredicted RBP6.12□□□□□ -1.43
SF3B1-210ENST00000482158 SKIV2L2P42285 1042 aaKnown RBP6.12□□□□□ -1.43
SF3B1-210ENST00000482158 TSTQ16762 297 aaKnown RBP6.12□□□□□ -1.43
SF3B1-210ENST00000482158 SMTNL2Q2TAL5 461 aa6.12□□□□□ -1.43
SF3B1-210ENST00000482158 TTC39AQ5SRH9 613 aa6.12□□□□□ -1.43
SF3B1-210ENST00000482158 TMEM268Q5VZI3 342 aa6.12□□□□□ -1.43
SF3B1-210ENST00000482158 AAGABQ6PD74 315 aa6.12□□□□□ -1.43
SF3B1-210ENST00000482158 WDR5BQ86VZ2 330 aa6.12□□□□□ -1.43
SF3B1-210ENST00000482158 COQ8BQ96D53 544 aa6.12□□□□□ -1.43
SF3B1-210ENST00000482158 WDR83Q9BRX9 315 aaKnown RBP6.12□□□□□ -1.43
SF3B1-210ENST00000482158 TUBB6Q9BUF5 446 aa6.12□□□□□ -1.43
SF3B1-210ENST00000482158 IFT27Q9BW83 186 aa6.12□□□□□ -1.43
SF3B1-210ENST00000482158 SLC25A18Q9H1K4 315 aa6.12□□□□□ -1.43
SF3B1-210ENST00000482158 ZNF335Q9H4Z2 1342 aaPredicted RBP6.12□□□□□ -1.43
SF3B1-210ENST00000482158 PPP1R14DQ9NXH3 145 aa6.12□□□□□ -1.43
SF3B1-210ENST00000482158 FBXO40Q9UH90 709 aa6.12□□□□□ -1.43
SF3B1-210ENST00000482158 KDM3AQ9Y4C1 1321 aa6.12□□□□□ -1.43
SF3B1-210ENST00000482158 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.12□□□□□ -1.43
SF3B1-210ENST00000482158 A0A1W2PQM1 296 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 ZNF814B7Z6K7 855 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 PRPF4O43172 522 aaKnown RBP eCLIP6.11□□□□□ -1.43
SF3B1-210ENST00000482158 TNFSF14O43557 240 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 ATG13O75143 517 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 RTN3O95197 1032 aaPredicted RBP6.11□□□□□ -1.43
SF3B1-210ENST00000482158 CAPN3P20807 821 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 CD38P28907 300 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 SLC16A2P36021 539 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 PAFAH1B1P43034 410 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 UFM1P61960 85 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 EFNB1P98172 346 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 ME3Q16798 604 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 COLEC12Q5KU26 742 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 ZNF626Q68DY1 528 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 FAAH2Q6GMR7 532 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 INO80CQ6PI98 192 aaPredicted RBP6.11□□□□□ -1.43
SF3B1-210ENST00000482158 SYCE2Q6PIF2 218 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 ZNF793Q6ZN11 406 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 R3HCC1LQ7Z5L2 792 aaKnown RBP6.11□□□□□ -1.43
SF3B1-210ENST00000482158 PIP4P1Q86T03 277 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 GPSM1Q86YR5 675 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 GHDCQ8N2G8 530 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 CPXM2Q8N436 756 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 CMASQ8NFW8 434 aaPredicted RBP6.11□□□□□ -1.43
SF3B1-210ENST00000482158 NFKBIDQ8NI38 313 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 MSRB1Q9NZV6 116 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 PEMTQ9UBM1 199 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 HSPB7Q9UBY9 170 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 PLEKHB1Q9UF11 243 aaPredicted RBP6.11□□□□□ -1.43
SF3B1-210ENST00000482158 CAMK2AQ9UQM7 478 aa6.11□□□□□ -1.43
SF3B1-210ENST00000482158 ADGRF5Q8IZF2 1346 aa6.1□□□□□ -1.43
SF3B1-210ENST00000482158 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.1□□□□□ -1.43
SF3B1-210ENST00000482158 A6NNC1 897 aa6.1□□□□□ -1.43
SF3B1-210ENST00000482158 TSPAN4O14817 238 aa6.1□□□□□ -1.43
SF3B1-210ENST00000482158 LDLRAD4O15165 306 aa6.1□□□□□ -1.43
SF3B1-210ENST00000482158 CYP19A1P11511 503 aaPredicted RBP6.1□□□□□ -1.43
SF3B1-210ENST00000482158 EFNA5P52803 228 aa6.1□□□□□ -1.43
SF3B1-210ENST00000482158 SLC9B1Q4ZJI4 515 aa6.1□□□□□ -1.43
SF3B1-210ENST00000482158 GPATCH4Q5T3I0 446 aaKnown RBP6.1□□□□□ -1.43
SF3B1-210ENST00000482158 C10orf25Q5T742 122 aa6.1□□□□□ -1.43
SF3B1-210ENST00000482158 MOB3CQ70IA8 216 aa6.1□□□□□ -1.43
SF3B1-210ENST00000482158 PRSS45Q7RTY3 260 aa6.1□□□□□ -1.43
SF3B1-210ENST00000482158 CHD1LQ86WJ1 897 aa6.1□□□□□ -1.43
SF3B1-210ENST00000482158 SLC25A41Q8N5S1 370 aa6.1□□□□□ -1.43
SF3B1-210ENST00000482158 DNAAF1Q8NEP3 725 aa6.1□□□□□ -1.43
SF3B1-210ENST00000482158 OR4N2Q8NGD1 307 aa6.1□□□□□ -1.43
SF3B1-210ENST00000482158 HDAC2Q92769 488 aaKnown RBP6.1□□□□□ -1.43
SF3B1-210ENST00000482158 ZNF419Q96HQ0 510 aaPredicted RBP6.1□□□□□ -1.43
SF3B1-210ENST00000482158 C7orf26Q96N11 449 aa6.1□□□□□ -1.43
SF3B1-210ENST00000482158 NR1H4Q96RI1 486 aaPredicted RBP6.1□□□□□ -1.43
SF3B1-210ENST00000482158 AASSQ9UDR5 926 aa6.1□□□□□ -1.43
SF3B1-210ENST00000482158 SARDHQ9UL12 918 aa6.1□□□□□ -1.43
SF3B1-210ENST00000482158 SETD1BQ9UPS6 1966 aaKnown RBP6.09□□□□□ -1.43
SF3B1-210ENST00000482158 A0A1W2PPH5 198 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 DDTLA6NHG4 134 aaPredicted RBP6.09□□□□□ -1.43
SF3B1-210ENST00000482158 FAM157AC9JC47 383 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 TMCC1O94876 653 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 TMEM63AO94886 807 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 TOP3BO95985 862 aaKnown RBP6.09□□□□□ -1.43
SF3B1-210ENST00000482158 UNGP13051 313 aaPredicted RBP6.09□□□□□ -1.43
SF3B1-210ENST00000482158 FBLP22087 321 aaKnown RBP6.09□□□□□ -1.43
SF3B1-210ENST00000482158 DPP6P42658 865 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 ARSFP54793 590 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 SLC18A2Q05940 514 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 MTX1Q13505 466 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 ALG10Q5BKT4 473 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 ALG10BQ5I7T1 473 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 HMBOX1Q6NT76 420 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 TMEM81Q6P7N7 255 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 TMED8Q6PL24 325 aaPredicted RBP6.09□□□□□ -1.43
SF3B1-210ENST00000482158 DSTYKQ6XUX3 929 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 B4GALNT4Q76KP1 1039 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 IGFN1Q86VF2 1251 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 KDM1BQ8NB78 822 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 SLC44A5Q8NCS7 719 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 TDRD7Q8NHU6 1098 aaKnown RBP6.09□□□□□ -1.43
SF3B1-210ENST00000482158 CUL5Q93034 780 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 HEMGNQ9BXL5 484 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 ZHX3Q9H4I2 956 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 PNRC2Q9NPJ4 139 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms