RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 ATXN7L2Q5T6C5 722 aaPredicted RBP20.73■□□□□ 0.91
CTSA-206ENST00000480961 DPY19L3Q6ZPD9 716 aa20.73■□□□□ 0.91
CTSA-206ENST00000480961 RFX6Q8HWS3 928 aa20.73■□□□□ 0.91
CTSA-206ENST00000480961 RYBPQ8N488 228 aaPredicted RBP20.73■□□□□ 0.91
CTSA-206ENST00000480961 NKD2Q969F2 451 aaPredicted RBP20.73■□□□□ 0.91
CTSA-206ENST00000480961 SPACA7Q96KW9 195 aa20.73■□□□□ 0.91
CTSA-206ENST00000480961 CALR3Q96L12 384 aaKnown RBP20.73■□□□□ 0.91
CTSA-206ENST00000480961 CEP44Q9C0F1 390 aa20.73■□□□□ 0.91
CTSA-206ENST00000480961 EPC1Q9H2F5 836 aa20.73■□□□□ 0.91
CTSA-206ENST00000480961 FBRSQ9HAH7 460 aa20.73■□□□□ 0.91
CTSA-206ENST00000480961 PDFQ9HBH1 243 aa20.73■□□□□ 0.91
CTSA-206ENST00000480961 LZTFL1Q9NQ48 299 aa20.73■□□□□ 0.91
CTSA-206ENST00000480961 UBA2Q9UBT2 640 aaPredicted RBP20.73■□□□□ 0.91
CTSA-206ENST00000480961 SARDHQ9UL12 918 aa20.73■□□□□ 0.91
CTSA-206ENST00000480961 SMG5Q9UPR3 1016 aaKnown RBP20.73■□□□□ 0.91
CTSA-206ENST00000480961 DOCK4Q8N1I0 1966 aa20.73■□□□□ 0.91
CTSA-206ENST00000480961 GPR179Q6PRD1 2367 aa20.72■□□□□ 0.91
CTSA-206ENST00000480961 ZSCAN5CA6NGD5 496 aaPredicted RBP20.72■□□□□ 0.91
CTSA-206ENST00000480961 PLK4O00444 970 aa20.72■□□□□ 0.91
CTSA-206ENST00000480961 MCF2LO15068 1137 aa20.72■□□□□ 0.91
CTSA-206ENST00000480961 NRDCO43847 1150 aa20.72■□□□□ 0.91
CTSA-206ENST00000480961 ZNF217O75362 1048 aa20.72■□□□□ 0.91
CTSA-206ENST00000480961 FTCDO95954 541 aa20.72■□□□□ 0.91
CTSA-206ENST00000480961 CTSLP07711 333 aa20.72■□□□□ 0.91
CTSA-206ENST00000480961 CCDC175P0C221 793 aa20.72■□□□□ 0.91
CTSA-206ENST00000480961 KRT10P13645 584 aa20.72■□□□□ 0.91
CTSA-206ENST00000480961 GKP32189 559 aa20.72■□□□□ 0.91
CTSA-206ENST00000480961 SLC8A1P32418 973 aa20.72■□□□□ 0.91
CTSA-206ENST00000480961 GEMIN4P57678 1058 aaKnown RBP20.72■□□□□ 0.91
CTSA-206ENST00000480961 DYNLT1P63172 113 aa20.72■□□□□ 0.91
CTSA-206ENST00000480961 GBE1Q04446 702 aa20.72■□□□□ 0.91
CTSA-206ENST00000480961 IFI16Q16666 785 aaKnown RBP20.72■□□□□ 0.91
CTSA-206ENST00000480961 CARD16Q5EG05 197 aa20.72■□□□□ 0.91
CTSA-206ENST00000480961 ARSIQ5FYB1 569 aa20.72■□□□□ 0.91
CTSA-206ENST00000480961 PCDH20Q8N6Y1 951 aaKnown RBP20.72■□□□□ 0.91
CTSA-206ENST00000480961 SUMF1Q8NBK3 374 aa20.72■□□□□ 0.91
CTSA-206ENST00000480961 PDLIM2Q96JY6 352 aa20.72■□□□□ 0.91
CTSA-206ENST00000480961 MAK16Q9BXY0 300 aaKnown RBP20.72■□□□□ 0.91
CTSA-206ENST00000480961 DUSP15Q9H1R2 295 aaPredicted RBP20.72■□□□□ 0.91
CTSA-206ENST00000480961 PABPC3Q9H361 631 aaKnown RBP20.72■□□□□ 0.91
CTSA-206ENST00000480961 KCNF1Q9H3M0 494 aa20.72■□□□□ 0.91
CTSA-206ENST00000480961 SP110Q9HB58 689 aa20.72■□□□□ 0.91
CTSA-206ENST00000480961 USP36Q9P275 1121 aaKnown RBP20.72■□□□□ 0.91
CTSA-206ENST00000480961 HECAQ9UBI9 543 aaPredicted RBP20.72■□□□□ 0.91
CTSA-206ENST00000480961 SERGEFQ9UGK8 458 aa20.72■□□□□ 0.91
CTSA-206ENST00000480961 PACSIN2Q9UNF0 486 aaPredicted RBP20.72■□□□□ 0.91
CTSA-206ENST00000480961 CAPN6Q9Y6Q1 641 aa20.72■□□□□ 0.91
CTSA-206ENST00000480961 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.71■□□□□ 0.91
CTSA-206ENST00000480961 LMNAP02545 664 aaKnown RBP20.71■□□□□ 0.91
CTSA-206ENST00000480961 CHRNA3P32297 505 aa20.71■□□□□ 0.91
CTSA-206ENST00000480961 SERPINB6P35237 376 aa20.71■□□□□ 0.91
CTSA-206ENST00000480961 RECQLP46063 649 aaPredicted RBP20.71■□□□□ 0.91
CTSA-206ENST00000480961 BYSLQ13895 437 aaKnown RBP20.71■□□□□ 0.91
CTSA-206ENST00000480961 PAFAH1B3Q15102 231 aaKnown RBP20.71■□□□□ 0.91
CTSA-206ENST00000480961 PLK5Q496M5 336 aa20.71■□□□□ 0.91
CTSA-206ENST00000480961 KAZNQ674X7 775 aa20.71■□□□□ 0.91
CTSA-206ENST00000480961 NPNTQ6UXI9 565 aa20.71■□□□□ 0.91
CTSA-206ENST00000480961 SPOCD1Q6ZMY3 1216 aa20.71■□□□□ 0.91
CTSA-206ENST00000480961 ARMCX6Q7L4S7 300 aa20.71■□□□□ 0.91
CTSA-206ENST00000480961 ASCL5Q7RTU5 278 aa20.71■□□□□ 0.91
CTSA-206ENST00000480961 METTL3Q86U44 580 aaKnown RBP20.71■□□□□ 0.91
CTSA-206ENST00000480961 NT5DC3Q86UY8 548 aa20.71■□□□□ 0.91
CTSA-206ENST00000480961 TMEFF1Q8IYR6 380 aa20.71■□□□□ 0.91
CTSA-206ENST00000480961 KATNAL2Q8IYT4 538 aa20.71■□□□□ 0.91
CTSA-206ENST00000480961 GRIN3AQ8TCU5 1115 aa20.71■□□□□ 0.91
CTSA-206ENST00000480961 TOE1Q96GM8 510 aaKnown RBP20.71■□□□□ 0.91
CTSA-206ENST00000480961 EXOC2Q96KP1 924 aa20.71■□□□□ 0.91
CTSA-206ENST00000480961 TSGA10Q9BZW7 698 aa20.71■□□□□ 0.91
CTSA-206ENST00000480961 FBXL12Q9NXK8 326 aa20.71■□□□□ 0.91
CTSA-206ENST00000480961 PPM1HQ9ULR3 514 aa20.71■□□□□ 0.91
CTSA-206ENST00000480961 FARP1Q9Y4F1 1045 aaPredicted RBP20.71■□□□□ 0.91
CTSA-206ENST00000480961 USP34Q70CQ2 3546 aa20.71■□□□□ 0.91
CTSA-206ENST00000480961 A0A1W2PP55 124 aa20.7■□□□□ 0.9
CTSA-206ENST00000480961 PROB1E7EW31 1015 aa20.7■□□□□ 0.9
CTSA-206ENST00000480961 RNASEH2AO75792 299 aaKnown RBP20.7■□□□□ 0.9
CTSA-206ENST00000480961 ZRANB2O95218 330 aaKnown RBP eCLIP20.7■□□□□ 0.9
CTSA-206ENST00000480961 CD6P30203 668 aa20.7■□□□□ 0.9
CTSA-206ENST00000480961 CDKN2BP42772 138 aa20.7■□□□□ 0.9
CTSA-206ENST00000480961 CCNHP51946 323 aaPredicted RBP20.7■□□□□ 0.9
CTSA-206ENST00000480961 RHOAP61586 193 aa20.7■□□□□ 0.9
CTSA-206ENST00000480961 ZBTB16Q05516 673 aa20.7■□□□□ 0.9
CTSA-206ENST00000480961 IL10RBQ08334 325 aa20.7■□□□□ 0.9
CTSA-206ENST00000480961 SLC10A2Q12908 348 aaPredicted RBP20.7■□□□□ 0.9
CTSA-206ENST00000480961 INO80DQ53TQ3 878 aaPredicted RBP20.7■□□□□ 0.9
CTSA-206ENST00000480961 PEX26Q7Z412 305 aa20.7■□□□□ 0.9
CTSA-206ENST00000480961 CCDC50Q8IVM0 306 aa20.7■□□□□ 0.9
CTSA-206ENST00000480961 RCOR2Q8IZ40 523 aa20.7■□□□□ 0.9
CTSA-206ENST00000480961 HDDC3Q8N4P3 179 aa20.7■□□□□ 0.9
CTSA-206ENST00000480961 ATPAF2Q8N5M1 289 aa20.7■□□□□ 0.9
CTSA-206ENST00000480961 AADATQ8N5Z0 425 aa20.7■□□□□ 0.9
CTSA-206ENST00000480961 PIP4K2CQ8TBX8 421 aa20.7■□□□□ 0.9
CTSA-206ENST00000480961 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.7■□□□□ 0.9
CTSA-206ENST00000480961 ISG20Q96AZ6 181 aaKnown RBP20.7■□□□□ 0.9
CTSA-206ENST00000480961 FAM122AQ96E09 287 aa20.7■□□□□ 0.9
CTSA-206ENST00000480961 CCDC114Q96M63 670 aa20.7■□□□□ 0.9
CTSA-206ENST00000480961 OMDQ99983 421 aa20.7■□□□□ 0.9
CTSA-206ENST00000480961 LHX3Q9UBR4 397 aa20.7■□□□□ 0.9
CTSA-206ENST00000480961 IL36AQ9UHA7 158 aa20.7■□□□□ 0.9
CTSA-206ENST00000480961 AMFRQ9UKV5 643 aa20.7■□□□□ 0.9
CTSA-206ENST00000480961 RAB23Q9ULC3 237 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms