RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 A0A1B0GVT2 93 aa17.36■□□□□ 0.37
HSPG2-209ENST00000480900 GIPC1O14908 333 aa17.36■□□□□ 0.37
HSPG2-209ENST00000480900 LATO43561 262 aa17.36■□□□□ 0.37
HSPG2-209ENST00000480900 PLRG1O43660 514 aaKnown RBP17.36■□□□□ 0.37
HSPG2-209ENST00000480900 RAMP2O60895 175 aa17.36■□□□□ 0.37
HSPG2-209ENST00000480900 ZNF821O75541 412 aaPredicted RBP17.36■□□□□ 0.37
HSPG2-209ENST00000480900 TPM3P06753 285 aa17.36■□□□□ 0.37
HSPG2-209ENST00000480900 CTSLP07711 333 aa17.36■□□□□ 0.37
HSPG2-209ENST00000480900 ZNF883P0CG24 379 aa17.36■□□□□ 0.37
HSPG2-209ENST00000480900 CD59P13987 128 aa17.36■□□□□ 0.37
HSPG2-209ENST00000480900 EPHB2P29323 1055 aa17.36■□□□□ 0.37
HSPG2-209ENST00000480900 HTR7P34969 479 aa17.36■□□□□ 0.37
HSPG2-209ENST00000480900 ACVRL1P37023 503 aa17.36■□□□□ 0.37
HSPG2-209ENST00000480900 RACK1P63244 317 aaKnown RBP17.36■□□□□ 0.37
HSPG2-209ENST00000480900 CNTN1Q12860 1018 aa17.36■□□□□ 0.37
HSPG2-209ENST00000480900 AGBL4Q5VU57 503 aa17.36■□□□□ 0.37
HSPG2-209ENST00000480900 VPS36Q86VN1 386 aa17.36■□□□□ 0.37
HSPG2-209ENST00000480900 RTL3Q8N8U3 475 aaKnown RBP17.36■□□□□ 0.37
HSPG2-209ENST00000480900 DEFB124Q8NES8 71 aa17.36■□□□□ 0.37
HSPG2-209ENST00000480900 CATSPERBQ9H7T0 1116 aa17.36■□□□□ 0.37
HSPG2-209ENST00000480900 HPCAL4Q9UM19 191 aa17.36■□□□□ 0.37
HSPG2-209ENST00000480900 LUC7L2Q9Y383 392 aaKnown RBP17.36■□□□□ 0.37
HSPG2-209ENST00000480900 TBC1D3DA0A087WVF3 549 aa17.35■□□□□ 0.37
HSPG2-209ENST00000480900 TBC1D3IA0A087WXS9 549 aa17.35■□□□□ 0.37
HSPG2-209ENST00000480900 TBC1D3EA0A087X179 549 aa17.35■□□□□ 0.37
HSPG2-209ENST00000480900 TBC1D3KA0A087X1G2 549 aa17.35■□□□□ 0.37
HSPG2-209ENST00000480900 TBC1D3FA6NER0 549 aaPredicted RBP17.35■□□□□ 0.37
HSPG2-209ENST00000480900 WASH4PA8MWX3 477 aa17.35■□□□□ 0.37
HSPG2-209ENST00000480900 EIF3CLB5ME19 914 aaKnown RBP17.35■□□□□ 0.37
HSPG2-209ENST00000480900 TBC1D3LB9A6J9 549 aa17.35■□□□□ 0.37
HSPG2-209ENST00000480900 PLK4O00444 970 aa17.35■□□□□ 0.37
HSPG2-209ENST00000480900 FGF10O15520 208 aaPredicted RBP17.35■□□□□ 0.37
HSPG2-209ENST00000480900 CREB3O43889 395 aa17.35■□□□□ 0.37
HSPG2-209ENST00000480900 CD160O95971 181 aa17.35■□□□□ 0.37
HSPG2-209ENST00000480900 SERPING1P05155 500 aa17.35■□□□□ 0.37
HSPG2-209ENST00000480900 TBC1D3HP0C7X1 549 aa17.35■□□□□ 0.37
HSPG2-209ENST00000480900 ZNF252P-AS1Q0IIN9 211 aa17.35■□□□□ 0.37
HSPG2-209ENST00000480900 CCDC15Q0P6D6 951 aa17.35■□□□□ 0.37
HSPG2-209ENST00000480900 POLD3Q15054 466 aaPredicted RBP17.35■□□□□ 0.37
HSPG2-209ENST00000480900 POM121L1PQ3SYA9 428 aa17.35■□□□□ 0.37
HSPG2-209ENST00000480900 TBC1D3GQ6DHY5 549 aa17.35■□□□□ 0.37
HSPG2-209ENST00000480900 TBC1D3CQ6IPX1 549 aa17.35■□□□□ 0.37
HSPG2-209ENST00000480900 DPY19L3Q6ZPD9 716 aa17.35■□□□□ 0.37
HSPG2-209ENST00000480900 DNAAF5Q86Y56 855 aa17.35■□□□□ 0.37
HSPG2-209ENST00000480900 TBC1D3Q8IZP1 549 aaPredicted RBP17.35■□□□□ 0.37
HSPG2-209ENST00000480900 ISG20Q96AZ6 181 aaKnown RBP17.35■□□□□ 0.37
HSPG2-209ENST00000480900 EIF3CQ99613 913 aaKnown RBP17.35■□□□□ 0.37
HSPG2-209ENST00000480900 TNKS2Q9H2K2 1166 aa17.35■□□□□ 0.37
HSPG2-209ENST00000480900 GAREM1Q9H706 876 aa17.35■□□□□ 0.37
HSPG2-209ENST00000480900 MRPL47Q9HD33 250 aaKnown RBP17.35■□□□□ 0.37
HSPG2-209ENST00000480900 IL36AQ9UHA7 158 aa17.35■□□□□ 0.37
HSPG2-209ENST00000480900 EPG5Q9HCE0 2579 aa17.35■□□□□ 0.37
HSPG2-209ENST00000480900 ARID1BQ8NFD5 2236 aaPredicted RBP17.35■□□□□ 0.37
HSPG2-209ENST00000480900 ZSCAN5CA6NGD5 496 aaPredicted RBP17.34■□□□□ 0.37
HSPG2-209ENST00000480900 KPNA3O00505 521 aaPredicted RBP17.34■□□□□ 0.37
HSPG2-209ENST00000480900 RNF8O76064 485 aa17.34■□□□□ 0.37
HSPG2-209ENST00000480900 GYPCP04921 128 aa17.34■□□□□ 0.37
HSPG2-209ENST00000480900 PMLP29590 882 aa17.34■□□□□ 0.37
HSPG2-209ENST00000480900 NUDT1P36639 197 aa17.34■□□□□ 0.37
HSPG2-209ENST00000480900 YBEYP58557 167 aaPredicted RBP17.34■□□□□ 0.37
HSPG2-209ENST00000480900 PPP2CBP62714 309 aa17.34■□□□□ 0.37
HSPG2-209ENST00000480900 PPP2CAP67775 309 aa17.34■□□□□ 0.37
HSPG2-209ENST00000480900 KIF19Q2TAC6 998 aa17.34■□□□□ 0.37
HSPG2-209ENST00000480900 HLA-BQ31612 363 aa17.34■□□□□ 0.37
HSPG2-209ENST00000480900 ADAT2Q7Z6V5 191 aaKnown RBP17.34■□□□□ 0.37
HSPG2-209ENST00000480900 TRIM69Q86WT6 500 aa17.34■□□□□ 0.37
HSPG2-209ENST00000480900 PLPP6Q8IY26 295 aa17.34■□□□□ 0.37
HSPG2-209ENST00000480900 ARFGAP1Q8N6T3 406 aa17.34■□□□□ 0.37
HSPG2-209ENST00000480900 CHST14Q8NCH0 376 aa17.34■□□□□ 0.37
HSPG2-209ENST00000480900 GRIN3AQ8TCU5 1115 aa17.34■□□□□ 0.37
HSPG2-209ENST00000480900 CPLX3Q8WVH0 158 aa17.34■□□□□ 0.37
HSPG2-209ENST00000480900 NCAPGQ9BPX3 1015 aa17.34■□□□□ 0.37
HSPG2-209ENST00000480900 TRIM7Q9C029 511 aa17.34■□□□□ 0.37
HSPG2-209ENST00000480900 XPO4Q9C0E2 1151 aaKnown RBP17.34■□□□□ 0.37
HSPG2-209ENST00000480900 NOL6Q9H6R4 1146 aaKnown RBP17.34■□□□□ 0.37
HSPG2-209ENST00000480900 EBF2Q9HAK2 575 aa17.34■□□□□ 0.37
HSPG2-209ENST00000480900 PREBQ9HCU5 417 aa17.34■□□□□ 0.37
HSPG2-209ENST00000480900 DYRK4Q9NR20 520 aa17.34■□□□□ 0.37
HSPG2-209ENST00000480900 DONSONQ9NYP3 566 aa17.34■□□□□ 0.37
HSPG2-209ENST00000480900 AP4E1Q9UPM8 1137 aa17.34■□□□□ 0.37
HSPG2-209ENST00000480900 ANKRD6Q9Y2G4 727 aa17.34■□□□□ 0.37
HSPG2-209ENST00000480900 FNDC3AQ9Y2H6 1198 aaKnown RBP17.34■□□□□ 0.37
HSPG2-209ENST00000480900 FCF1Q9Y324 198 aaKnown RBP17.34■□□□□ 0.37
HSPG2-209ENST00000480900 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.34■□□□□ 0.37
HSPG2-209ENST00000480900 WASF2Q9Y6W5 498 aa17.34■□□□□ 0.37
HSPG2-209ENST00000480900 ANKRD36A6QL64 1941 aa17.33■□□□□ 0.37
HSPG2-209ENST00000480900 VILLO15195 856 aa17.33■□□□□ 0.36
HSPG2-209ENST00000480900 KDELR3O43731 214 aa17.33■□□□□ 0.36
HSPG2-209ENST00000480900 TPI1P60174 286 aa17.33■□□□□ 0.36
HSPG2-209ENST00000480900 HNRNPDQ14103 355 aaKnown RBP17.33■□□□□ 0.36
HSPG2-209ENST00000480900 PARP15Q460N3 678 aa17.33■□□□□ 0.36
HSPG2-209ENST00000480900 CARD16Q5EG05 197 aa17.33■□□□□ 0.36
HSPG2-209ENST00000480900 ERMARDQ5T6L9 678 aa17.33■□□□□ 0.36
HSPG2-209ENST00000480900 PIP5KL1Q5T9C9 394 aa17.33■□□□□ 0.36
HSPG2-209ENST00000480900 PSTKQ8IV42 348 aaKnown RBP17.33■□□□□ 0.36
HSPG2-209ENST00000480900 UMODL1-AS1Q8N2C9 162 aa17.33■□□□□ 0.36
HSPG2-209ENST00000480900 ARRDC3Q96B67 414 aa17.33■□□□□ 0.36
HSPG2-209ENST00000480900 SKA1Q96BD8 255 aa17.33■□□□□ 0.36
HSPG2-209ENST00000480900 PPP1R16AQ96I34 528 aa17.33■□□□□ 0.36
HSPG2-209ENST00000480900 SLC6A18Q96N87 628 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms