RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 KIAA0907Q7Z7F0 614 aaPredicted RBP17.9■□□□□ 0.46
UPF3A-206ENST00000480362 C12orf40Q86WS4 652 aa17.9■□□□□ 0.46
UPF3A-206ENST00000480362 PPIL6Q8IXY8 311 aa17.9■□□□□ 0.46
UPF3A-206ENST00000480362 FBXO25Q8TCJ0 367 aa17.9■□□□□ 0.46
UPF3A-206ENST00000480362 ACDQ96AP0 544 aa17.9■□□□□ 0.46
UPF3A-206ENST00000480362 ZNF419Q96HQ0 510 aaPredicted RBP17.9■□□□□ 0.46
UPF3A-206ENST00000480362 GBA3Q9H227 469 aa17.9■□□□□ 0.46
UPF3A-206ENST00000480362 GLOD4Q9HC38 313 aa17.9■□□□□ 0.46
UPF3A-206ENST00000480362 NT5MQ9NPB1 228 aa17.9■□□□□ 0.46
UPF3A-206ENST00000480362 DNAJC17Q9NVM6 304 aaKnown RBP17.9■□□□□ 0.46
UPF3A-206ENST00000480362 GTSE1Q9NYZ3 720 aa17.9■□□□□ 0.46
UPF3A-206ENST00000480362 ATP8A1Q9Y2Q0 1164 aa17.9■□□□□ 0.46
UPF3A-206ENST00000480362 FARP1Q9Y4F1 1045 aaPredicted RBP17.9■□□□□ 0.46
UPF3A-206ENST00000480362 CD160O95971 181 aa17.89■□□□□ 0.45
UPF3A-206ENST00000480362 SLC6A11P48066 632 aa17.89■□□□□ 0.45
UPF3A-206ENST00000480362 DGKGP49619 791 aa17.89■□□□□ 0.45
UPF3A-206ENST00000480362 DMC1Q14565 340 aa17.89■□□□□ 0.45
UPF3A-206ENST00000480362 KCNJ11Q14654 390 aa17.89■□□□□ 0.45
UPF3A-206ENST00000480362 RFTN1Q14699 578 aaPredicted RBP17.89■□□□□ 0.45
UPF3A-206ENST00000480362 MORF4L2Q15014 288 aa17.89■□□□□ 0.45
UPF3A-206ENST00000480362 CYTH1Q15438 398 aa17.89■□□□□ 0.45
UPF3A-206ENST00000480362 SMAD2Q15796 467 aaKnown RBP17.89■□□□□ 0.45
UPF3A-206ENST00000480362 FUT11Q495W5 492 aa17.89■□□□□ 0.45
UPF3A-206ENST00000480362 SYCP2LQ5T4T6 812 aa17.89■□□□□ 0.45
UPF3A-206ENST00000480362 ANKRD22Q5VYY1 191 aa17.89■□□□□ 0.45
UPF3A-206ENST00000480362 ETFBKMTQ8IXQ9 262 aa17.89■□□□□ 0.45
UPF3A-206ENST00000480362 PLCD3Q8N3E9 789 aa17.89■□□□□ 0.45
UPF3A-206ENST00000480362 BBS5Q8N3I7 341 aa17.89■□□□□ 0.45
UPF3A-206ENST00000480362 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.89■□□□□ 0.45
UPF3A-206ENST00000480362 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.89■□□□□ 0.45
UPF3A-206ENST00000480362 NAT8LQ8N9F0 302 aa17.89■□□□□ 0.45
UPF3A-206ENST00000480362 FAM129AQ9BZQ8 928 aa17.89■□□□□ 0.45
UPF3A-206ENST00000480362 TTLL3Q9Y4R7 772 aa17.89■□□□□ 0.45
UPF3A-206ENST00000480362 TCRBV7S3A2A0A539 114 aa17.88■□□□□ 0.45
UPF3A-206ENST00000480362 E7EVH7 732 aa17.88■□□□□ 0.45
UPF3A-206ENST00000480362 TULP3O75386 442 aa17.88■□□□□ 0.45
UPF3A-206ENST00000480362 GJA4P35212 333 aa17.88■□□□□ 0.45
UPF3A-206ENST00000480362 ITKQ08881 620 aa17.88■□□□□ 0.45
UPF3A-206ENST00000480362 SEMA5AQ13591 1074 aa17.88■□□□□ 0.45
UPF3A-206ENST00000480362 PRPSAP1Q14558 356 aa17.88■□□□□ 0.45
UPF3A-206ENST00000480362 ZNF235Q14590 738 aa17.88■□□□□ 0.45
UPF3A-206ENST00000480362 AAK1Q2M2I8 961 aa17.88■□□□□ 0.45
UPF3A-206ENST00000480362 ITPRIPL2Q3MIP1 535 aa17.88■□□□□ 0.45
UPF3A-206ENST00000480362 PTCRAQ6ISU1 281 aaPredicted RBP17.88■□□□□ 0.45
UPF3A-206ENST00000480362 RETSATQ6NUM9 610 aa17.88■□□□□ 0.45
UPF3A-206ENST00000480362 ADIPOR2Q86V24 386 aa17.88■□□□□ 0.45
UPF3A-206ENST00000480362 PGBD5Q8N414 524 aa17.88■□□□□ 0.45
UPF3A-206ENST00000480362 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.88■□□□□ 0.451e-6■■□□□ 11.4
UPF3A-206ENST00000480362 PRCCQ92733 491 aaPredicted RBP17.88■□□□□ 0.45
UPF3A-206ENST00000480362 EXOC4Q96A65 974 aa17.88■□□□□ 0.45
UPF3A-206ENST00000480362 FCRL5Q96RD9 977 aa17.88■□□□□ 0.45
UPF3A-206ENST00000480362 GORASP1Q9BQQ3 440 aa17.88■□□□□ 0.45
UPF3A-206ENST00000480362 CINPQ9BW66 212 aaPredicted RBP17.88■□□□□ 0.45
UPF3A-206ENST00000480362 BRD9Q9H8M2 597 aa17.88■□□□□ 0.45
UPF3A-206ENST00000480362 LIMD1Q9UGP4 676 aa17.88■□□□□ 0.45
UPF3A-206ENST00000480362 SEPT3Q9UH03 358 aa17.88■□□□□ 0.45
UPF3A-206ENST00000480362 CCDC151A5D8V7 595 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 SMAPO00193 183 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 ARNTLO00327 626 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 DYNC1I1O14576 645 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 MUSKO15146 869 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 ERLIN1O75477 346 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 MT-CO1P00395 513 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 APRTP07741 180 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 FAM153BP0C7A2 387 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 H2AFXP16104 143 aaPredicted RBP17.87■□□□□ 0.45
UPF3A-206ENST00000480362 CTSOP43234 321 aaPredicted RBP17.87■□□□□ 0.45
UPF3A-206ENST00000480362 MAGEA6P43360 314 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 LMAN1P49257 510 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 GEMIN4P57678 1058 aaKnown RBP17.87■□□□□ 0.45
UPF3A-206ENST00000480362 MAXP61244 160 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 SLC20A2Q08357 652 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 GEN1Q17RS7 908 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 FAM153CQ494X1 144 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 INO80DQ53TQ3 878 aaPredicted RBP17.87■□□□□ 0.45
UPF3A-206ENST00000480362 MBLAC2Q68D91 279 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 GRAMD4Q6IC98 578 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 HOOK3Q86VS8 718 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 AHI1Q8N157 1196 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 PDCD7Q8N8D1 485 aaKnown RBP17.87■□□□□ 0.45
UPF3A-206ENST00000480362 TSEN2Q8NCE0 465 aaKnown RBP17.87■□□□□ 0.45
UPF3A-206ENST00000480362 PSKH2Q96QS6 385 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 FMO2Q99518 471 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 SLC25A51Q9H1U9 297 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 ARGLU1Q9NWB6 273 aaPredicted RBP17.87■□□□□ 0.45
UPF3A-206ENST00000480362 DEC1Q9P2X7 70 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 MTRF1LQ9UGC7 380 aaKnown RBP17.87■□□□□ 0.45
UPF3A-206ENST00000480362 FAM153AQ9UHL3 310 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 SHOC2Q9UQ13 582 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 SLC27A6Q9Y2P4 619 aa17.87■□□□□ 0.45
UPF3A-206ENST00000480362 REV3LO60673 3130 aa17.86■□□□□ 0.45
UPF3A-206ENST00000480362 CXorf51AA0A1B0GTR3 108 aa17.86■□□□□ 0.45
UPF3A-206ENST00000480362 GOLGA8MH3BSY2 632 aa17.86■□□□□ 0.45
UPF3A-206ENST00000480362 K7ERQ8 282 aa17.86■□□□□ 0.45
UPF3A-206ENST00000480362 TMCC1O94876 653 aa17.86■□□□□ 0.45
UPF3A-206ENST00000480362 TMEM63AO94886 807 aa17.86■□□□□ 0.45
UPF3A-206ENST00000480362 POLR2EP19388 210 aaKnown RBP17.86■□□□□ 0.45
UPF3A-206ENST00000480362 TPSB2P20231 275 aa17.86■□□□□ 0.45
UPF3A-206ENST00000480362 SULT2A1Q06520 285 aa17.86■□□□□ 0.45
UPF3A-206ENST00000480362 NIPAL4Q0D2K0 466 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms