RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 SLC20A2Q08357 652 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 PAFAH1B3Q15102 231 aaKnown RBP9.12□□□□□ -0.95
DDX56-211ENST00000479602 GEN1Q17RS7 908 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 RAP1GAP2Q684P5 730 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 SLC9A4Q6AI14 798 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 TPGS1Q6ZTW0 290 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 RFX8Q6ZV50 586 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 ARMCX6Q7L4S7 300 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 ANKS1BQ7Z6G8 1248 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 RABEPKQ7Z6M1 372 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 RAB44Q7Z6P3 723 aaPredicted RBP9.12□□□□□ -0.95
DDX56-211ENST00000479602 DAAM2Q86T65 1068 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 DNAAF5Q86Y56 855 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 PLPP6Q8IY26 295 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 CHPFQ8IZ52 775 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 CCAR2Q8N163 923 aaKnown RBP9.12□□□□□ -0.95
DDX56-211ENST00000479602 SPOCK2Q92563 424 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 RNF34Q969K3 372 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 ALG14Q96F25 216 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 RPRD1AQ96P16 312 aaPredicted RBP9.12□□□□□ -0.95
DDX56-211ENST00000479602 CSPG4P5Q96PW8 444 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 ACE2Q9BYF1 805 aaPredicted RBP9.12□□□□□ -0.95
DDX56-211ENST00000479602 BRD8Q9H0E9 1235 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 SLC6A17Q9H1V8 727 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 FSCN3Q9NQT6 498 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 CACNA2D2Q9NY47 1150 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 KIAA1522Q9P206 1035 aaPredicted RBP9.12□□□□□ -0.95
DDX56-211ENST00000479602 BCCIPQ9P287 314 aaKnown RBP eCLIP9.12□□□□□ -0.95
DDX56-211ENST00000479602 AMACRQ9UHK6 382 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 TTC7AQ9ULT0 858 aaPredicted RBP9.12□□□□□ -0.95
DDX56-211ENST00000479602 HS3ST2Q9Y278 367 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 JRKLQ9Y4A0 524 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 CAPN6Q9Y6Q1 641 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 STON1Q9Y6Q2 735 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 DUSP10Q9Y6W6 482 aa9.12□□□□□ -0.95
DDX56-211ENST00000479602 URB1O60287 2271 aaKnown RBP9.11□□□□□ -0.95
DDX56-211ENST00000479602 SRRM3A6NNA2 597 aaPredicted RBP9.11□□□□□ -0.95
DDX56-211ENST00000479602 METTL12A8MUP2 240 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 H0Y626 953 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 SPOPO43791 374 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 TRIM16O95361 564 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 SRPRAP08240 638 aaKnown RBP9.11□□□□□ -0.95
DDX56-211ENST00000479602 IRF1P10914 325 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 PRLRP16471 622 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 KDELR1P24390 212 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 CD6P30203 668 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 HLA-FP30511 346 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 IL12RB1P42701 662 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 CDKN2BP42772 138 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 NOP2P46087 812 aaKnown RBP9.11□□□□□ -0.95
DDX56-211ENST00000479602 NR2C2P49116 596 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 TAS2R40P59535 323 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 TPI1P60174 286 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 FOXC1Q12948 553 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 HNRNPDQ14103 355 aaKnown RBP9.11□□□□□ -0.95
DDX56-211ENST00000479602 TFDP2Q14188 446 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 DPYSL3Q14195 570 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 MESDQ14696 234 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 UAP1L1Q3KQV9 507 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 PLEKHG6Q3KR16 790 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 FUT11Q495W5 492 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 RAB6CQ53S08 254 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 INO80DQ53TQ3 878 aaPredicted RBP9.11□□□□□ -0.95
DDX56-211ENST00000479602 MEI1Q5TIA1 1274 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 BZW1Q7L1Q6 419 aaKnown RBP9.11□□□□□ -0.95
DDX56-211ENST00000479602 GLRX5Q86SX6 157 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 MFN1Q8IWA4 741 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 CCDC117Q8IWD4 279 aaPredicted RBP9.11□□□□□ -0.95
DDX56-211ENST00000479602 RCOR2Q8IZ40 523 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 LGI2Q8N0V4 545 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 PGBD3Q8N328 593 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 MINDY1Q8N5J2 469 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 DEFB119Q8N690 84 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 DDI1Q8WTU0 396 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 FOXJ1Q92949 421 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 IGSF8Q969P0 613 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 ZNF599Q96NL3 588 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 KCTD15Q96SI1 283 aaPredicted RBP9.11□□□□□ -0.95
DDX56-211ENST00000479602 C2orf49Q9BVC5 232 aaPredicted RBP9.11□□□□□ -0.95
DDX56-211ENST00000479602 FRMD8P1Q9BZ68 369 aaPredicted RBP9.11□□□□□ -0.95
DDX56-211ENST00000479602 KLC2Q9H0B6 622 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 RAB6CQ9H0N0 254 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 TMEM245Q9H330 911 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 SLC32A1Q9H598 525 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 LRRC19Q9H756 370 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.11□□□□□ -0.95
DDX56-211ENST00000479602 ELOVL2Q9NXB9 296 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 PLK2Q9NYY3 685 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 KLK13Q9UKR3 277 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 AMFRQ9UKV5 643 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 VANGL2Q9ULK5 521 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 ZKSCAN5Q9Y2L8 839 aa9.11□□□□□ -0.95
DDX56-211ENST00000479602 GOLGA4Q13439 2230 aaKnown RBP9.11□□□□□ -0.95
DDX56-211ENST00000479602 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.1□□□□□ -0.95
DDX56-211ENST00000479602 SPAARA0A1B0GVQ0 90 aa9.1□□□□□ -0.95
DDX56-211ENST00000479602 FAM72CH0Y354 149 aa9.1□□□□□ -0.95
DDX56-211ENST00000479602 EEF2KO00418 725 aaKnown RBP9.1□□□□□ -0.95
DDX56-211ENST00000479602 HYAL3O43820 417 aaPredicted RBP9.1□□□□□ -0.95
DDX56-211ENST00000479602 OPHN1O60890 802 aa9.1□□□□□ -0.95
DDX56-211ENST00000479602 PALMO75781 387 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms