RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 PYCARDQ9ULZ3 195 aa6.41□□□□□ -1.38
SF3B1-209ENST00000479532 NOTCH4Q99466 2003 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 A0A087X0T9 212 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 C2orf78A6NCI8 922 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 YJEFN3A6XGL0 299 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 EFCAB8A8MWE9 144 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 EIF3CLB5ME19 914 aaKnown RBP6.4□□□□□ -1.38
SF3B1-209ENST00000479532 C2CD4DB7Z1M9 353 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 E7ENQ6 273 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 AGRPO00253 132 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 SLC9A3R1O14745 358 aaPredicted RBP6.4□□□□□ -1.38
SF3B1-209ENST00000479532 COCHO43405 550 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 MOSPD3O75425 235 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 TADA3O75528 432 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 F9P00740 461 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 OAS1P00973 400 aaKnown RBP6.4□□□□□ -1.38
SF3B1-209ENST00000479532 PLEKP08567 350 aaPredicted RBP6.4□□□□□ -1.38
SF3B1-209ENST00000479532 H2AFZP0C0S5 128 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 FAM228BP0C875 321 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 KRT3P12035 628 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 ABCB4P21439 1286 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 SDC4P31431 198 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 KCNQ1P51787 676 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 RWDD2BP57060 319 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 RNASE9P60153 205 aaKnown RBP6.4□□□□□ -1.38
SF3B1-209ENST00000479532 GPC5P78333 572 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 KRT83P78385 493 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 SLC7A9P82251 487 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 GFPT1Q06210 699 aaPredicted RBP6.4□□□□□ -1.38
SF3B1-209ENST00000479532 ADCY2Q08462 1091 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 EFEMP1Q12805 493 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 DCAF6Q58WW2 860 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 WDR59Q6PJI9 974 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 OLFML1Q6UWY5 402 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 H2AFVQ71UI9 128 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 MON1BQ7L1V2 547 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 SLC26A9Q7LBE3 791 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 ARCQ7LC44 396 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 SCD5Q86SK9 330 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 TMEM150AQ86TG1 271 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 ARID3BQ8IVW6 561 aaPredicted RBP6.4□□□□□ -1.38
SF3B1-209ENST00000479532 LRRC56Q8IYG6 542 aaPredicted RBP6.4□□□□□ -1.38
SF3B1-209ENST00000479532 KIAA1958Q8N8K9 716 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 ARL14EPQ8N8R7 260 aaPredicted RBP6.4□□□□□ -1.38
SF3B1-209ENST00000479532 CLEC4CQ8WTT0 213 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 DEPDC1BQ8WUY9 529 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 PPP1R14AQ96A00 147 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 ELSPBP1Q96BH3 223 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 MYADMQ96S97 322 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 EIF3CQ99613 913 aaKnown RBP6.4□□□□□ -1.38
SF3B1-209ENST00000479532 CHP1Q99653 195 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 SH3GL3Q99963 347 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 SYT11Q9BT88 431 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 SLC46A2Q9BY10 475 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 DCLK3Q9C098 648 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 ISCUQ9H1K1 167 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 FAM204AQ9H8W3 233 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 TRPV4Q9HBA0 871 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 C1GALT1Q9NS00 363 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 TDP1Q9NUW8 608 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.4□□□□□ -1.383e-10■□□□□ 8.5
SF3B1-209ENST00000479532 MARCH2Q9P0N8 246 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 IGSF9Q9P2J2 1179 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 CNOT8Q9UFF9 292 aaKnown RBP6.4□□□□□ -1.38
SF3B1-209ENST00000479532 SLC12A6Q9UHW9 1150 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 CDH22Q9UJ99 828 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 INTUQ9ULD6 942 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 ARHGAP26Q9UNA1 814 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 ZNF510Q9Y2H8 683 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 HBS1LQ9Y450 684 aaKnown RBP6.4□□□□□ -1.38
SF3B1-209ENST00000479532 CPQQ9Y646 472 aa6.4□□□□□ -1.38
SF3B1-209ENST00000479532 DOCK6Q96HP0 2047 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 SLC12A8A0AV02 714 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 FAM170AA1A519 330 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 SIGLEC16A6NMB1 481 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 LOC730098B7Z3J9 87 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 LEFTY2O00292 366 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 ARHGAP6O43182 974 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 COQ9O75208 318 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 ECI2O75521 394 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 GRAP2O75791 330 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 NDUFA10O95299 355 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 OLFM2O95897 454 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 APOEP02649 317 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 FAM153BP0C7A2 387 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 TMEM253P0C7T8 217 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 IRF1P10914 325 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 SLC2A3P11169 496 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 PDGFRAP16234 1089 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 PSMC3P17980 439 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 GPD1P21695 349 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 MATKP42679 507 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 MAGEA1P43355 309 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 IFNAR2P48551 515 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 HARS2P49590 506 aaKnown RBP6.39□□□□□ -1.39
SF3B1-209ENST00000479532 SULT1E1P49888 294 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 TUBB2AQ13885 445 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 ARL13BQ3SXY8 428 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 ARHGAP29Q52LW3 1261 aa6.39□□□□□ -1.39
SF3B1-209ENST00000479532 FAM78AQ5JUQ0 283 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms