RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 ZNF142P52746 1687 aaPredicted RBP14.39□□□□□ -0.11
NPHP4-208ENST00000478423 TBL1XO60907 577 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 PROCP04070 461 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 OR56A5P0C7T3 313 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 POLR2EP19388 210 aaKnown RBP14.39□□□□□ -0.11
NPHP4-208ENST00000478423 STK40Q8N2I9 435 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 TMEM199Q8N511 208 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 GRIN3AQ8TCU5 1115 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 KCTD4Q8WVF5 259 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 SYNDIG1Q9H7V2 258 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 SAR1AQ9NR31 198 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 GIMAP4Q9NUV9 329 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 SPG21Q9NZD8 308 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 ZNF112Q9UJU3 913 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 TRAV19A0A0A6YYK7 116 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 CARNS1A5YM72 827 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 PDZK1P1A8MUH7 402 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 F8W810 466 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 FKBP6O75344 327 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 ASPAP45381 313 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 PRKCZQ05513 592 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 HSPA14Q0VDF9 509 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 CDC16Q13042 620 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 CRYMQ14894 314 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 FASTKD3Q14CZ7 662 aaKnown RBP14.39□□□□□ -0.11
NPHP4-208ENST00000478423 TCHHL1Q5QJ38 904 aaPredicted RBP14.39□□□□□ -0.11
NPHP4-208ENST00000478423 WLSQ5T9L3 541 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 PYROXD2Q8N2H3 581 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 STAG3L4Q8TBR4 150 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 JADE3Q92613 823 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 YIPF2Q9BWQ6 316 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 DPY30Q9C005 99 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 RMND5AQ9H871 391 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 GLOD4Q9HC38 313 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 ARHGEF4Q9NR80 690 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 PCDHB9Q9Y5E1 797 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 CA12O43570 354 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 STAU1O95793 577 aaKnown RBP14.39□□□□□ -0.11
NPHP4-208ENST00000478423 ADH1AP07327 375 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 DRD4P21917 467 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 GPD2P43304 727 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 CLCN5P51795 746 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 DSG1Q02413 1049 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 MSLNQ13421 630 aaPredicted RBP14.39□□□□□ -0.11
NPHP4-208ENST00000478423 ARMC6Q6NXE6 501 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 SLC39A4Q6P5W5 647 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 PACS1Q6VY07 963 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 MILR1Q7Z6M3 343 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 HOMEZQ8IX15 550 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 MIER2Q8N344 545 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 KCTD15Q96SI1 283 aaPredicted RBP14.39□□□□□ -0.11
NPHP4-208ENST00000478423 SIKE1Q9BRV8 207 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 FAM124BQ9H5Z6 455 aaPredicted RBP14.39□□□□□ -0.11
NPHP4-208ENST00000478423 ZDHHC6Q9H6R6 413 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 THG1LQ9NWX6 298 aaKnown RBP14.39□□□□□ -0.11
NPHP4-208ENST00000478423 GMIPQ9P107 970 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 HMGXB4Q9UGU5 601 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 SRRM3A6NNA2 597 aaPredicted RBP14.39□□□□□ -0.11
NPHP4-208ENST00000478423 TMEM114B3SHH9 223 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 PDE5AO76074 875 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 LRIG2O94898 1065 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 GPC1P35052 558 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 CRHR2Q13324 411 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 ACOX1Q15067 660 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 PGS1Q32NB8 556 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 RIPOR1Q6ZS17 1223 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 USP45Q70EL2 814 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 PLEKHO2Q8TD55 490 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 CCT7Q99832 543 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 ACBD6Q9BR61 282 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 HGH1Q9BTY7 390 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 BPIFA1Q9NP55 256 aa14.39□□□□□ -0.11
NPHP4-208ENST00000478423 MRASO14807 208 aa14.38□□□□□ -0.11
NPHP4-208ENST00000478423 VCLP18206 1134 aa14.38□□□□□ -0.11
NPHP4-208ENST00000478423 CYP2A7P20853 494 aa14.38□□□□□ -0.11
NPHP4-208ENST00000478423 SNRPD1P62314 119 aaKnown RBP14.38□□□□□ -0.11
NPHP4-208ENST00000478423 FSTL1Q12841 308 aa14.38□□□□□ -0.11
NPHP4-208ENST00000478423 LRRC8DQ7L1W4 858 aa14.38□□□□□ -0.11
NPHP4-208ENST00000478423 OOSP2Q86WS3 158 aa14.38□□□□□ -0.11
NPHP4-208ENST00000478423 FAM126BQ8IXS8 530 aa14.38□□□□□ -0.11
NPHP4-208ENST00000478423 CCDC185Q8N715 623 aa14.38□□□□□ -0.11
NPHP4-208ENST00000478423 DBF4BQ8NFT6 615 aa14.38□□□□□ -0.11
NPHP4-208ENST00000478423 CASP10Q92851 521 aa14.38□□□□□ -0.11
NPHP4-208ENST00000478423 MED8Q96G25 268 aa14.38□□□□□ -0.11
NPHP4-208ENST00000478423 BTN2A3PQ96KV6 586 aa14.38□□□□□ -0.11
NPHP4-208ENST00000478423 ZCCHC2Q9C0B9 1178 aaKnown RBP14.38□□□□□ -0.11
NPHP4-208ENST00000478423 SEMA4BQ9NPR2 832 aaPredicted RBP14.38□□□□□ -0.11
NPHP4-208ENST00000478423 ZMYM5Q9UJ78 669 aa14.38□□□□□ -0.11
NPHP4-208ENST00000478423 CROTQ9UKG9 612 aa14.38□□□□□ -0.11
NPHP4-208ENST00000478423 NDUFAF1Q9Y375 327 aa14.38□□□□□ -0.11
NPHP4-208ENST00000478423 MRPS23Q9Y3D9 190 aaKnown RBP14.38□□□□□ -0.11
NPHP4-208ENST00000478423 A0A087X1B8 175 aa14.38□□□□□ -0.11
NPHP4-208ENST00000478423 KANSL1LA0AUZ9 987 aa14.38□□□□□ -0.11
NPHP4-208ENST00000478423 CPSF4O95639 269 aaKnown RBP14.38□□□□□ -0.11
NPHP4-208ENST00000478423 ATP6V1G2O95670 118 aa14.38□□□□□ -0.11
NPHP4-208ENST00000478423 PCNAP12004 261 aa14.38□□□□□ -0.11
NPHP4-208ENST00000478423 ATP5F1P24539 256 aaPredicted RBP14.38□□□□□ -0.11
NPHP4-208ENST00000478423 CTNNB1P35222 781 aa14.38□□□□□ -0.11
NPHP4-208ENST00000478423 PPM1AP35813 382 aa14.38□□□□□ -0.11
NPHP4-208ENST00000478423 DNAJC14Q6Y2X3 702 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms