RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 GPD2P43304 727 aa20.73■□□□□ 0.91
PDLIM1-202ENST00000477757 IRAK1P51617 712 aa20.73■□□□□ 0.91
PDLIM1-202ENST00000477757 PITX1P78337 314 aaPredicted RBP20.73■□□□□ 0.91
PDLIM1-202ENST00000477757 NFKB2Q00653 900 aa20.73■□□□□ 0.91
PDLIM1-202ENST00000477757 DRAP1Q14919 205 aaPredicted RBP20.73■□□□□ 0.91
PDLIM1-202ENST00000477757 ZNF574Q6ZN55 896 aaPredicted RBP20.73■□□□□ 0.91
PDLIM1-202ENST00000477757 NAT6Q93015 286 aa20.73■□□□□ 0.91
PDLIM1-202ENST00000477757 SLC35C1Q96A29 364 aa20.73■□□□□ 0.91
PDLIM1-202ENST00000477757 SGF29Q96ES7 293 aa20.73■□□□□ 0.91
PDLIM1-202ENST00000477757 LIN37Q96GY3 246 aaPredicted RBP20.73■□□□□ 0.91
PDLIM1-202ENST00000477757 BOCQ9BWV1 1114 aa20.73■□□□□ 0.91
PDLIM1-202ENST00000477757 KLF15Q9UIH9 416 aa20.73■□□□□ 0.91
PDLIM1-202ENST00000477757 PCDHGA7Q9Y5G6 932 aa20.73■□□□□ 0.91
PDLIM1-202ENST00000477757 AHCTF1Q8WYP5 2266 aa20.73■□□□□ 0.91
PDLIM1-202ENST00000477757 MUSKO15146 869 aa20.72■□□□□ 0.91
PDLIM1-202ENST00000477757 SUV39H1O43463 412 aa20.72■□□□□ 0.91
PDLIM1-202ENST00000477757 SLC2A3P11169 496 aa20.72■□□□□ 0.91
PDLIM1-202ENST00000477757 ACADSBP45954 432 aa20.72■□□□□ 0.91
PDLIM1-202ENST00000477757 RABIFP47224 123 aa20.72■□□□□ 0.91
PDLIM1-202ENST00000477757 FGL2Q14314 439 aa20.72■□□□□ 0.91
PDLIM1-202ENST00000477757 KIAA1161Q6NSJ0 714 aa20.72■□□□□ 0.91
PDLIM1-202ENST00000477757 USP53Q70EK8 1073 aa20.72■□□□□ 0.91
PDLIM1-202ENST00000477757 IL12RB2Q99665 862 aa20.72■□□□□ 0.91
PDLIM1-202ENST00000477757 SRRTQ9BXP5 876 aaKnown RBP20.72■□□□□ 0.91
PDLIM1-202ENST00000477757 FAM204AQ9H8W3 233 aa20.72■□□□□ 0.91
PDLIM1-202ENST00000477757 ACSL6Q9UKU0 697 aa20.72■□□□□ 0.91
PDLIM1-202ENST00000477757 RP1P56715 2156 aa20.72■□□□□ 0.91
PDLIM1-202ENST00000477757 RNF103O00237 685 aa20.71■□□□□ 0.91
PDLIM1-202ENST00000477757 RAD51BO15315 384 aa20.71■□□□□ 0.91
PDLIM1-202ENST00000477757 GJB6O95452 261 aa20.71■□□□□ 0.91
PDLIM1-202ENST00000477757 MT-CO1P00395 513 aa20.71■□□□□ 0.91
PDLIM1-202ENST00000477757 JUNDP17535 347 aa20.71■□□□□ 0.91
PDLIM1-202ENST00000477757 CCR1P32246 355 aa20.71■□□□□ 0.91
PDLIM1-202ENST00000477757 SYKP43405 635 aa20.71■□□□□ 0.91
PDLIM1-202ENST00000477757 RPIAP49247 311 aa20.71■□□□□ 0.91
PDLIM1-202ENST00000477757 YWHAZP63104 245 aaKnown RBP20.71■□□□□ 0.91
PDLIM1-202ENST00000477757 RPS21P63220 83 aaKnown RBP20.71■□□□□ 0.91
PDLIM1-202ENST00000477757 DNM1Q05193 864 aaKnown RBP20.71■□□□□ 0.91
PDLIM1-202ENST00000477757 SLC35F3Q8IY50 421 aa20.71■□□□□ 0.91
PDLIM1-202ENST00000477757 PPM1KQ8N3J5 372 aa20.71■□□□□ 0.91
PDLIM1-202ENST00000477757 GRIN3AQ8TCU5 1115 aa20.71■□□□□ 0.91
PDLIM1-202ENST00000477757 LMX1AQ8TE12 382 aa20.71■□□□□ 0.91
PDLIM1-202ENST00000477757 EXTL1Q92935 676 aa20.71■□□□□ 0.91
PDLIM1-202ENST00000477757 KAT5Q92993 513 aa20.71■□□□□ 0.91
PDLIM1-202ENST00000477757 PPP1R16AQ96I34 528 aa20.71■□□□□ 0.91
PDLIM1-202ENST00000477757 NT5C1BQ96P26 610 aa20.71■□□□□ 0.91
PDLIM1-202ENST00000477757 ARHGAP9Q9BRR9 750 aa20.71■□□□□ 0.91
PDLIM1-202ENST00000477757 SLC17A9Q9BYT1 436 aa20.71■□□□□ 0.91
PDLIM1-202ENST00000477757 TBC1D30Q9Y2I9 924 aa20.71■□□□□ 0.91
PDLIM1-202ENST00000477757 PLD2O14939 933 aa20.7■□□□□ 0.9
PDLIM1-202ENST00000477757 CASC3O15234 703 aaKnown RBP20.7■□□□□ 0.9
PDLIM1-202ENST00000477757 CLDN11O75508 207 aa20.7■□□□□ 0.9
PDLIM1-202ENST00000477757 SLC5A2P31639 672 aa20.7■□□□□ 0.9
PDLIM1-202ENST00000477757 MAPK8IP2Q13387 824 aaPredicted RBP20.7■□□□□ 0.9
PDLIM1-202ENST00000477757 AUHQ13825 339 aaKnown RBP20.7■□□□□ 0.9
PDLIM1-202ENST00000477757 SPIDRQ14159 915 aa20.7■□□□□ 0.9
PDLIM1-202ENST00000477757 TPRG1LQ5T0D9 272 aa20.7■□□□□ 0.9
PDLIM1-202ENST00000477757 SMYD4Q8IYR2 804 aaPredicted RBP20.7■□□□□ 0.9
PDLIM1-202ENST00000477757 ATP11CQ8NB49 1132 aa20.7■□□□□ 0.9
PDLIM1-202ENST00000477757 CHST14Q8NCH0 376 aa20.7■□□□□ 0.9
PDLIM1-202ENST00000477757 STK32AQ8WU08 396 aa20.7■□□□□ 0.9
PDLIM1-202ENST00000477757 GLMNQ92990 594 aa20.7■□□□□ 0.9
PDLIM1-202ENST00000477757 PSMB7Q99436 277 aa20.7■□□□□ 0.9
PDLIM1-202ENST00000477757 SEMA3CQ99985 751 aa20.7■□□□□ 0.9
PDLIM1-202ENST00000477757 C2orf49Q9BVC5 232 aaPredicted RBP20.7■□□□□ 0.9
PDLIM1-202ENST00000477757 SLC4A5Q9BY07 1137 aa20.7■□□□□ 0.9
PDLIM1-202ENST00000477757 VPS51Q9UID3 782 aa20.7■□□□□ 0.9
PDLIM1-202ENST00000477757 VANGL2Q9ULK5 521 aa20.7■□□□□ 0.9
PDLIM1-202ENST00000477757 TRPM6Q9BX84 2022 aa20.7■□□□□ 0.9
PDLIM1-202ENST00000477757 FAM237AA0A1B0GTK4 181 aa20.69■□□□□ 0.9
PDLIM1-202ENST00000477757 E5RJQ4 531 aa20.69■□□□□ 0.9
PDLIM1-202ENST00000477757 K7ERQ8 282 aa20.69■□□□□ 0.9
PDLIM1-202ENST00000477757 SPINT1O43278 529 aa20.69■□□□□ 0.9
PDLIM1-202ENST00000477757 NOBOXO60393 691 aa20.69■□□□□ 0.9
PDLIM1-202ENST00000477757 FAM87AP0C7U9 286 aa20.69■□□□□ 0.9
PDLIM1-202ENST00000477757 SFTPCP11686 197 aa20.69■□□□□ 0.9
PDLIM1-202ENST00000477757 CLCN6P51797 869 aa20.69■□□□□ 0.9
PDLIM1-202ENST00000477757 NEK3P51956 506 aa20.69■□□□□ 0.9
PDLIM1-202ENST00000477757 NDUFA8P51970 172 aa20.69■□□□□ 0.9
PDLIM1-202ENST00000477757 KRT83P78385 493 aa20.69■□□□□ 0.9
PDLIM1-202ENST00000477757 EIF3IQ13347 325 aaKnown RBP20.69■□□□□ 0.9
PDLIM1-202ENST00000477757 PDE1CQ14123 709 aaPredicted RBP20.69■□□□□ 0.9
PDLIM1-202ENST00000477757 MEA1Q16626 185 aa20.69■□□□□ 0.9
PDLIM1-202ENST00000477757 ZSCAN30Q86W11 494 aa20.69■□□□□ 0.9
PDLIM1-202ENST00000477757 BTN2A2Q8WVV5 523 aa20.69■□□□□ 0.9
PDLIM1-202ENST00000477757 CCDC3Q9BQI4 270 aa20.69■□□□□ 0.9
PDLIM1-202ENST00000477757 MUC3BQ9H195 1237 aa20.69■□□□□ 0.9
PDLIM1-202ENST00000477757 THAP9Q9H5L6 903 aa20.69■□□□□ 0.9
PDLIM1-202ENST00000477757 DDIT4Q9NX09 232 aa20.69■□□□□ 0.9
PDLIM1-202ENST00000477757 ARMCX3Q9UH62 379 aaPredicted RBP20.69■□□□□ 0.9
PDLIM1-202ENST00000477757 IL36AQ9UHA7 158 aa20.69■□□□□ 0.9
PDLIM1-202ENST00000477757 IPO11Q9UI26 975 aaKnown RBP20.69■□□□□ 0.9
PDLIM1-202ENST00000477757 NTN3O00634 580 aaPredicted RBP20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 SNAP91O60641 907 aa20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 PAK4O96013 591 aaPredicted RBP20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 AFPP02771 609 aaKnown RBP20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 ADRB3P13945 408 aa20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 RRM1P23921 792 aa20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 FMO5P49326 533 aa20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 INHBCP55103 352 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms