RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 L2HGDHQ9H9P8 463 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 USP29Q9HBJ7 922 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 THAP10Q9P2Z0 257 aaPredicted RBP16.48■□□□□ 0.23
VHL-203ENST00000477538 SLCO3A1Q9UIG8 710 aa16.48■□□□□ 0.23
VHL-203ENST00000477538 KANSL1LA0AUZ9 987 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 ANTXRLA6NF34 631 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 K7ERQ8 282 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 STK10O94804 968 aaKnown RBP16.47■□□□□ 0.23
VHL-203ENST00000477538 JCHAINP01591 159 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 HNRNPLP14866 589 aaKnown RBP eCLIP16.47■□□□□ 0.23
VHL-203ENST00000477538 PTPN3P26045 913 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 STIP1P31948 543 aaKnown RBP16.47■□□□□ 0.23
VHL-203ENST00000477538 TIE1P35590 1138 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 KIR2DL1P43626 348 aaPredicted RBP16.47■□□□□ 0.23
VHL-203ENST00000477538 MMP13P45452 471 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 GDF10P55107 478 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 LMNB2Q03252 620 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 WASHC5Q12768 1159 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 CCINQ13939 588 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 ZNF234Q14588 700 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 FBXO43Q4G163 708 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 EMC10Q5UCC4 262 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 C22orf39Q6P5X5 142 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 CCDC105Q8IYK2 499 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 TEX26Q8N6G2 289 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 ZNF513Q8N8E2 541 aaPredicted RBP16.47■□□□□ 0.23
VHL-203ENST00000477538 CEP112Q8N8E3 955 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 FAM71DQ8N9W8 422 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 KDM1BQ8NB78 822 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 ATL2Q8NHH9 583 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 MYO19Q96H55 970 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 VAT1Q99536 393 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 IL12RB2Q99665 862 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 CEP41Q9BYV8 373 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 TBC1D17Q9HA65 648 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 LTB4R2Q9NPC1 389 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 SEPT3Q9UH03 358 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 HCN2Q9UL51 889 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 SLC8A2Q9UPR5 921 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 FCF1Q9Y324 198 aaKnown RBP16.47■□□□□ 0.23
VHL-203ENST00000477538 TRIOO75962 3097 aa16.47■□□□□ 0.23
VHL-203ENST00000477538 CTAGE15A4D2H0 777 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 NPC1O15118 1278 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 SMAD6O43541 496 aaKnown RBP16.46■□□□□ 0.23
VHL-203ENST00000477538 DCXO43602 365 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 ATP9BO43861 1147 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 CTAGE8P0CG41 777 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 TARSP26639 723 aaKnown RBP16.46■□□□□ 0.23
VHL-203ENST00000477538 NRLP54845 237 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 RHOAP61586 193 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 SIGLEC14Q08ET2 396 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 UBXN2BQ14CS0 331 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 CYTH1Q15438 398 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 ACCSLQ4AC99 568 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 TEX44Q53QW1 395 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 C2orf27AQ580R0 203 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 DGKKQ5KSL6 1271 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 GSTA5Q7RTV2 222 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 CTAGE6Q86UF2 777 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 CTAGE4Q8IX94 777 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 ALLCQ8N6M5 410 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 CCDC26Q8TAB7 109 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 KCNV2Q8TDN2 545 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 GRK7Q8WTQ7 553 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 RTP4Q96DX8 246 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 ZNF419Q96HQ0 510 aaPredicted RBP16.46■□□□□ 0.23
VHL-203ENST00000477538 RUNDC3BQ96NL0 473 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 KRT12Q99456 494 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 CARD6Q9BX69 1037 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 CEP44Q9C0F1 390 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 NT5MQ9NPB1 228 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 ZDHHC4Q9NPG8 344 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 RBM22Q9NW64 420 aaKnown RBP eCLIP16.46■□□□□ 0.23
VHL-203ENST00000477538 KLHL8Q9P2G9 620 aaPredicted RBP16.46■□□□□ 0.23
VHL-203ENST00000477538 PCYOX1Q9UHG3 505 aa16.46■□□□□ 0.23
VHL-203ENST00000477538 BDP1A6H8Y1 2624 aa16.46■□□□□ 0.22
VHL-203ENST00000477538 TTC34A8MYJ7 566 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 RNF40O75150 1001 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 IFNB1P01574 187 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 HLA-DQB2P05538 268 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 CHRM1P11229 460 aaPredicted RBP16.45■□□□□ 0.22
VHL-203ENST00000477538 CHRNB1P11230 501 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 IL12RB1P42701 662 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 MRPS21P82921 87 aaKnown RBP16.45■□□□□ 0.22
VHL-203ENST00000477538 LRRC32Q14392 662 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 DLG2Q15700 870 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 FAM182AQ5T1J6 154 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 SERPINA13PQ6UXR4 307 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 CHPFQ8IZ52 775 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 ZNF567Q8N184 647 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 ZNF687Q8N1G0 1237 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 PCDH20Q8N6Y1 951 aaKnown RBP16.45■□□□□ 0.22
VHL-203ENST00000477538 CCDC89Q8N998 374 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 TSEN2Q8NCE0 465 aaKnown RBP16.45■□□□□ 0.22
VHL-203ENST00000477538 EDAQ92838 391 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 ISG20Q96AZ6 181 aaKnown RBP16.45■□□□□ 0.22
VHL-203ENST00000477538 AGAP3Q96P47 875 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 PSKH2Q96QS6 385 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 ACOX2Q99424 681 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 NELL2Q99435 816 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms