RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	AQP9	O43315	295 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	XPOT	O43592	962 aa	Known RBP	4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	GREM1	O60565	184 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	KLHL41	O60662	606 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	GUCY1B2	O75343	617 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	JRK	O75564	520 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	DGKI	O75912	1065 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	DNAJB5	O75953	348 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	DDAH1	O94760	285 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	MTA2	O94776	668 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	TOMM70	O94826	608 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	SERPINA6	P08185	405 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	SRGAP2C	P0DJJ0	459 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	SRGAP2B	P0DMP2	458 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	HSPA1A	P0DMV8	641 aa	Known RBP	4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	HSPA1B	P0DMV9	641 aa	Known RBP	4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	THRA	P10827	490 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	SCG2	P13521	617 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	KRT13	P13646	458 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	PSMC3	P17980	439 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	PRKACB	P22694	351 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	PKLR	P30613	574 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	RFC1	P35251	1148 aa	Predicted RBP	4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	RPL21	P46778	160 aa	Known RBP	4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	PMS1	P54277	932 aa	Known RBP	4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	EIF6	P56537	245 aa	Known RBP	4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	TXNL4A	P83876	142 aa	Known RBP	4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	BNC1	Q01954	994 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	TAGLN	Q01995	201 aa	Known RBP	4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	BTK	Q06187	659 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	GRSF1	Q12849	480 aa	Known RBP eCLIP	4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	PWP1	Q13610	501 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	PTK6	Q13882	451 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	SELPLG	Q14242	412 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	ICAM4	Q14773	271 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	ZNF846	Q147U1	533 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	KCNJ8	Q15842	424 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	FXN	Q16595	210 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	INSC	Q1MX18	579 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	ABCB5	Q2M3G0	1257 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	TEDDM1	Q5T9Z0	273 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	BTBD8	Q5XKL5	378 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	ATG16L1	Q676U5	607 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	ERAP2	Q6P179	960 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	CCDC137	Q6PK04	289 aa	Known RBP	4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	C4orf22	Q6V702	233 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	IDO2	Q6ZQW0	420 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	OTOA	Q7RTW8	1153 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	FBXO33	Q7Z6M2	555 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	SRRM1	Q8IYB3	904 aa	Known RBP	4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	C7orf61	Q8IZ16	206 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	CCDC33	Q8N5R6	958 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	CPSF7	Q8N684	471 aa	Known RBP	4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	LINC00482	Q8N8I6	264 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	TSPAN14	Q8NG11	270 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	SLC2A14	Q8TDB8	520 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	ACTRT2	Q8TDY3	377 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	OSBP2	Q969R2	916 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	CALML4	Q96GE6	196 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	OXNAD1	Q96HP4	312 aa	Predicted RBP	4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	DNAJC1	Q96KC8	554 aa	Known RBP	4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	FAM84B	Q96KN1	310 aa	Predicted RBP	4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	PTCHD1	Q96NR3	888 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	ZNF347	Q96SE7	839 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	SLC9A7	Q96T83	725 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	BCL7B	Q9BQE9	202 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	EFHD1	Q9BUP0	239 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	TSSK1B	Q9BXA7	367 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	OSBPL11	Q9BXB4	747 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	RAB34	Q9BZG1	259 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	TRIM9	Q9C026	710 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	OR2B2	Q9GZK3	357 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	TRABD	Q9H4I3	376 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	MANSC1	Q9H8J5	431 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	CPNE5	Q9HCH3	593 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	HMG20A	Q9NP66	347 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	ZNF277	Q9NRM2	450 aa	Predicted RBP	4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	OLFML3	Q9NRN5	406 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	PNPLA3	Q9NST1	481 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	SLC38A7	Q9NVC3	462 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	ARL8B	Q9NVJ2	186 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	THAP1	Q9NVV9	213 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	NCKIPSD	Q9NZQ3	722 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	ADAMTS1	Q9UHI8	967 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	ATPIF1	Q9UII2	106 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	VPS28	Q9UK41	221 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	ITGA11	Q9UKX5	1188 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	DENND2A	Q9ULE3	1009 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	PACSIN2	Q9UNF0	486 aa	Predicted RBP	4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	PLA2G4C	Q9UP65	541 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	TDRKH	Q9Y2W6	561 aa	Known RBP	4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	NEU2	Q9Y3R4	380 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	PCDHB4	Q9Y5E5	795 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	MYH10	P35580	1976 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	MYH2	Q9UKX2	1941 aa		4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	DICER1	Q9UPY3	1922 aa	Known RBP	4.82	□□□□□ -1.64
PTCD3-212	ENST00000477520	ATAD5	Q96QE3	1844 aa		4.81	□□□□□ -1.64
PTCD3-212	ENST00000477520		A0A1B0GUL6	1792 aa		4.81	□□□□□ -1.64
PTCD3-212	ENST00000477520	ASTN2	O75129	1339 aa	Predicted RBP	4.81	□□□□□ -1.64
PTCD3-212	ENST00000477520	NFASC	O94856	1347 aa		4.81	□□□□□ -1.64

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