RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 DNAJC28Q9NX36 388 aa10.02□□□□□ -0.81
COL4A5-204ENST00000477429 MTORP42345 2549 aa10.02□□□□□ -0.81
COL4A5-204ENST00000477429 SPG11Q96JI7 2443 aa10.02□□□□□ -0.81
COL4A5-204ENST00000477429 CELSR2Q9HCU4 2923 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.01□□□□□ -0.81
COL4A5-204ENST00000477429 TRIM49BA6NDI0 452 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 K7ELQ4 463 aaPredicted RBP10.01□□□□□ -0.81
COL4A5-204ENST00000477429 ZNF821O75541 412 aaPredicted RBP10.01□□□□□ -0.81
COL4A5-204ENST00000477429 GCATO75600 419 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 MOCS3O95396 460 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 TRUB2O95900 331 aaKnown RBP10.01□□□□□ -0.81
COL4A5-204ENST00000477429 GP1BAP07359 652 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 CELA2BP08218 269 aaPredicted RBP10.01□□□□□ -0.81
COL4A5-204ENST00000477429 SRCP12931 536 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 RRM1P23921 792 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 EIF2B5Q13144 721 aaKnown RBP10.01□□□□□ -0.81
COL4A5-204ENST00000477429 ZNF177Q13360 481 aaPredicted RBP10.01□□□□□ -0.81
COL4A5-204ENST00000477429 NNTQ13423 1086 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 C1orf61Q13536 156 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 EDRF1Q3B7T1 1238 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 ZSCAN23Q3MJ62 389 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 ARL13BQ3SXY8 428 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 OTUD1Q5VV17 481 aaPredicted RBP10.01□□□□□ -0.81
COL4A5-204ENST00000477429 TCERG1LQ5VWI1 586 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 RRAGAQ7L523 313 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 B3GNT8Q7Z7M8 397 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 SH2D3CQ8N5H7 860 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 ZNF557Q8N988 423 aaPredicted RBP10.01□□□□□ -0.81
COL4A5-204ENST00000477429 EXTL1Q92935 676 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 FAM149B1Q96BN6 582 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 LIN37Q96GY3 246 aaPredicted RBP10.01□□□□□ -0.81
COL4A5-204ENST00000477429 KREMEN1Q96MU8 473 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 KLF6Q99612 283 aaPredicted RBP10.01□□□□□ -0.81
COL4A5-204ENST00000477429 PREBQ9HCU5 417 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 TMPRSS4Q9NRS4 437 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 GGT7Q9UJ14 662 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 RABGEF1Q9UJ41 708 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 PCDHB4Q9Y5E5 795 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 ACTL7AQ9Y615 435 aa10.01□□□□□ -0.81
COL4A5-204ENST00000477429 SYNJ2BP-COX16A0A087WUM0 186 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 FAM237AA0A1B0GTK4 181 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 TYW5A2RUC4 315 aaKnown RBP10□□□□□ -0.81
COL4A5-204ENST00000477429 C2orf72A6NCS6 295 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 E5RJQ4 531 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 AGRPO00253 132 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 MUSKO15146 869 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 MAGEC1O60732 1142 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 ENDOD1O94919 500 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 TNFSF15O95150 251 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 CSF2P04141 144 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 PAEPP09466 180 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 FAM87AP0C7U9 286 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 HGFP14210 728 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 TFE3P19532 575 aaPredicted RBP10□□□□□ -0.81
COL4A5-204ENST00000477429 CMA1P23946 247 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 RPL13P26373 211 aaKnown RBP10□□□□□ -0.81
COL4A5-204ENST00000477429 CHRNA3P32297 505 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 PRCPP42785 496 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 ALFQ53S48 1182 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 ANKRD40Q6AI12 368 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 LINGO4Q6UY18 593 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 ZNF574Q6ZN55 896 aaPredicted RBP10□□□□□ -0.81
COL4A5-204ENST00000477429 CCDC81Q6ZN84 652 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 PTAR1Q7Z6K3 402 aaPredicted RBP10□□□□□ -0.81
COL4A5-204ENST00000477429 CLEC14AQ86T13 490 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 SLC35F3Q8IY50 421 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 ERCC4Q92889 916 aaPredicted RBP10□□□□□ -0.81
COL4A5-204ENST00000477429 BTN2A3PQ96KV6 586 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 HSFY1Q96LI6 401 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 PSMG3-AS1Q96PY0 264 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 DDX50Q9BQ39 737 aaKnown RBP10□□□□□ -0.81
COL4A5-204ENST00000477429 ABCG4Q9H172 646 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 TNKS2Q9H2K2 1166 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 UPF2Q9HAU5 1272 aaKnown RBP10□□□□□ -0.81
COL4A5-204ENST00000477429 COX16Q9P0S2 106 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 VANGL2Q9ULK5 521 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 TPX2Q9ULW0 747 aaKnown RBP10□□□□□ -0.81
COL4A5-204ENST00000477429 PCDHGA8Q9Y5G5 932 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 PDZD2O15018 2839 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 ADGRG4Q8IZF6 3080 aa10□□□□□ -0.81
COL4A5-204ENST00000477429 A0A0D9SEW6 157 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 SPTY2D1-AS1A0A0U1RR47 76 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 EME2A4GXA9 379 aaPredicted RBP9.99□□□□□ -0.81
COL4A5-204ENST00000477429 TCAF2A6NFQ2 919 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 F5H5T6 163 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 KPNA3O00505 521 aaPredicted RBP9.99□□□□□ -0.81
COL4A5-204ENST00000477429 ALOX15BO15296 676 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 GRAP2O75791 330 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 FBXO21O94952 628 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 PAK4O96013 591 aaPredicted RBP9.99□□□□□ -0.81
COL4A5-204ENST00000477429 EPB41P11171 864 aaKnown RBP9.99□□□□□ -0.81
COL4A5-204ENST00000477429 NME1P15531 152 aaKnown RBP9.99□□□□□ -0.81
COL4A5-204ENST00000477429 ZNF18P17022 549 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 HNRNPA2B1P22626 353 aaKnown RBP9.99□□□□□ -0.81
COL4A5-204ENST00000477429 RBMS1P29558 406 aaKnown RBP9.99□□□□□ -0.81
COL4A5-204ENST00000477429 GKP32189 559 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 NUDT1P36639 197 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 CYP4F2P78329 520 aa9.99□□□□□ -0.81
COL4A5-204ENST00000477429 AUHQ13825 339 aaKnown RBP9.99□□□□□ -0.81
COL4A5-204ENST00000477429 TCEA2Q15560 299 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms