RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 GRID2IPA4D2P6 1211 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 DRGXA6NNA5 263 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 LRRIQ3A6PVS8 624 aaPredicted RBP6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 PES1O00541 588 aaKnown RBP6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 EPHB6O15197 1021 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 GPR39O43194 453 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 PRKD3O94806 890 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 ENDOD1O94919 500 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 IPO7O95373 1038 aaKnown RBP6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 DARSP14868 501 aaKnown RBP6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 PRLRP16471 622 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 BMP5P22003 454 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 HOXA11P31270 313 aaPredicted RBP6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 ATICP31939 592 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 CHN2P52757 468 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 MFAP3P55082 362 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 NLRP11P59045 1033 aaKnown RBP6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 POLR2FP61218 127 aaKnown RBP6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 SPA17Q15506 151 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 SLC18A3Q16572 532 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 SGSM1Q2NKQ1 1148 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 DCAF4L1Q3SXM0 396 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 RNF219Q5W0B1 726 aaPredicted RBP6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 Q6ZVL8 140 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 TRMT1LQ7Z2T5 733 aaKnown RBP6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 RSPH3Q86UC2 560 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 SERINC5Q86VE9 423 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 VPS36Q86VN1 386 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 ZNF677Q86XU0 584 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 FAM71AQ8IYT1 594 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 LRRC71Q8N4P6 559 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 SLC30A5Q8TAD4 765 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 SHC3Q92529 594 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 BICD1Q96G01 975 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 FNBP1Q96RU3 617 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 CGRRF1Q99675 332 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 TCHPQ9BT92 498 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 MSTO1Q9BUK6 570 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 KIFC3Q9BVG8 833 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 TEX101Q9BY14 249 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 TSGA10Q9BZW7 698 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 SERHL2Q9H4I8 314 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 SETD4Q9NVD3 440 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 GCNT4Q9P109 453 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 DDX20Q9UHI6 824 aaKnown RBP6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 SCOCQ9UIL1 159 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 DNAJC12Q9UKB3 198 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 NENFQ9UMX5 172 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 KIAA1217Q5T5P2 1943 aa6.17□□□□□ -1.42
CDKN1B-204ENST00000477087 LRRC37A2A6NM11 1700 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 LRRC53A6NM62 1247 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 TISP43B9A030 160 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 INO80B-WBP1J3KQ70 363 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 KRT86O43790 486 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 TSPAN1O60635 241 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 IQCF3P0C7M6 154 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 CYP2C9P11712 490 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 ARF4P18085 180 aaPredicted RBP6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 CYP3A5P20815 502 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 TBXAS1P24557 533 aaPredicted RBP6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 DDX6P26196 483 aaKnown RBP eCLIP6.16□□□□□ -1.426e-7■■■■□ 20.8
CDKN1B-204ENST00000477087 ARHGAP25P42331 645 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 GPR3P46089 330 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 GCLMP48507 274 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 KLK7P49862 253 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 CLCN3P51790 818 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 VAV2P52735 878 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 MYL7Q01449 175 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 MALLQ13021 153 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 NAB2Q15742 525 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 ZBTB6Q15916 424 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 FAM102AQ5T9C2 384 aaPredicted RBP6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 ALKAL1Q6UXT8 129 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 LHFPL2Q6ZUX7 228 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 KIF18AQ8NI77 898 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 TRAPPC12Q8WVT3 735 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 RSPH1Q8WYR4 309 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 ZBTB45Q96K62 511 aaPredicted RBP6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 PPP1R13BQ96KQ4 1090 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 NT5C1BQ96P26 610 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 SPAG5Q96R06 1193 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 ADPGKQ9BRR6 497 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 FAM213AQ9BRX8 229 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 CRACR2AQ9BSW2 395 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 ARHGAP39Q9C0H5 1083 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 GPR88Q9GZN0 384 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 INTS2Q9H0H0 1204 aaKnown RBP6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 CDT1Q9H211 546 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 MINDY3Q9H8M7 445 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 DMRT3Q9NQL9 472 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 CCM2LQ9NUG4 571 aaPredicted RBP6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 TMEM140Q9NV12 185 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 RBAKQ9NYW8 714 aaPredicted RBP6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 HDAC6Q9UBN7 1215 aa6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 ZNFX1Q9P2E3 1918 aaKnown RBP6.16□□□□□ -1.42
CDKN1B-204ENST00000477087 COL4A3Q01955 1670 aa6.15□□□□□ -1.42
CDKN1B-204ENST00000477087 UNC119BA6NIH7 251 aa6.15□□□□□ -1.42
CDKN1B-204ENST00000477087 F8VZ95 297 aa6.15□□□□□ -1.42
CDKN1B-204ENST00000477087 FOXN3O00409 490 aaPredicted RBP6.15□□□□□ -1.42
CDKN1B-204ENST00000477087 ASS1P00966 412 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms