RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 TP53BP1Q12888 1972 aaPredicted RBP16.57■□□□□ 0.24
COL1A1-205ENST00000476387 SPEGQ15772 3267 aa16.57■□□□□ 0.24
COL1A1-205ENST00000476387 DMXL2Q8TDJ6 3036 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 ILVBLA1L0T0 632 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 H0Y8X5 98 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 DDX3XO00571 662 aaKnown RBP eCLIP16.56■□□□□ 0.24
COL1A1-205ENST00000476387 LATO43561 262 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 RTN2O75298 545 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 DKK1O94907 266 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 FTLP02792 175 aaPredicted RBP16.56■□□□□ 0.24
COL1A1-205ENST00000476387 PLEKP08567 350 aaPredicted RBP16.56■□□□□ 0.24
COL1A1-205ENST00000476387 VAV1P15498 845 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 DRD3P35462 400 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 SCAPQ12770 1279 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 INAVAQ3KP66 663 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 KCNT1Q5JUK3 1230 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 TMC6Q7Z403 805 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 SLFN11Q7Z7L1 901 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 SLCO6A1Q86UG4 719 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 DRC7Q8IY82 874 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 SH2D3CQ8N5H7 860 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 OR14C36Q8NHC7 312 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 CCDC114Q96M63 670 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 SLC6A18Q96N87 628 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.56■□□□□ 0.24
COL1A1-205ENST00000476387 XPO4Q9C0E2 1151 aaKnown RBP16.56■□□□□ 0.24
COL1A1-205ENST00000476387 RETREG1Q9H6L5 497 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 EBF2Q9HAK2 575 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 CNOT8Q9UFF9 292 aaKnown RBP16.56■□□□□ 0.24
COL1A1-205ENST00000476387 VPS51Q9UID3 782 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 CAPN11Q9UMQ6 739 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 HS3ST2Q9Y278 367 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.56■□□□□ 0.24
COL1A1-205ENST00000476387 SCINQ9Y6U3 715 aa16.56■□□□□ 0.24
COL1A1-205ENST00000476387 MCF2LO15068 1137 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 SNAP91O60641 907 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 LRIG2O94898 1065 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 SERPING1P05155 500 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 MYBL1P10243 752 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 RHOQP17081 205 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 PSMA2P25787 234 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 NUDT1P36639 197 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 ETFBP38117 255 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 MAPKAPK2P49137 400 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 AIF1P55008 147 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 GNA12Q03113 381 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 MAMLD1Q13495 774 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 DLG2Q15700 870 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 MANEALQ5VSG8 457 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 PLEKHA7Q6IQ23 1121 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 Q6ZVU0 165 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 PNPLA1Q8N8W4 532 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 ATP11CQ8NB49 1132 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 OR7D4Q8NG98 312 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 PSMB7Q99436 277 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 EPAS1Q99814 870 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 SPON2Q9BUD6 331 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 ATP13A1Q9HD20 1204 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 AASDHPPTQ9NRN7 309 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 TOR4AQ9NXH8 423 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 PPM1HQ9ULR3 514 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 BTBD3Q9Y2F9 522 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 FARP1Q9Y4F1 1045 aaPredicted RBP16.55■□□□□ 0.24
COL1A1-205ENST00000476387 FREM2Q5SZK8 3169 aa16.55■□□□□ 0.24
COL1A1-205ENST00000476387 TMEM131Q92545 1883 aa16.54■□□□□ 0.24
COL1A1-205ENST00000476387 A0A0D9SEW6 157 aa16.54■□□□□ 0.24
COL1A1-205ENST00000476387 A0A1B0GTQ1 180 aa16.54■□□□□ 0.24
COL1A1-205ENST00000476387 A0A1W2PR77 199 aa16.54■□□□□ 0.24
COL1A1-205ENST00000476387 C1QTNF3-AMACRE9PGA6 284 aa16.54■□□□□ 0.24
COL1A1-205ENST00000476387 CBX4O00257 560 aa16.54■□□□□ 0.24
COL1A1-205ENST00000476387 KCNK3O14649 394 aa16.54■□□□□ 0.24
COL1A1-205ENST00000476387 YKT6O15498 198 aa16.54■□□□□ 0.24
COL1A1-205ENST00000476387 TNFSF14O43557 240 aa16.54■□□□□ 0.24
COL1A1-205ENST00000476387 BNIP3LO60238 219 aa16.54■□□□□ 0.24
COL1A1-205ENST00000476387 GYPCP04921 128 aa16.54■□□□□ 0.24
COL1A1-205ENST00000476387 SRCP12931 536 aa16.54■□□□□ 0.24
COL1A1-205ENST00000476387 CD38P28907 300 aa16.54■□□□□ 0.24
COL1A1-205ENST00000476387 NFKBIBQ15653 356 aa16.54■□□□□ 0.24
COL1A1-205ENST00000476387 SLC45A4Q5BKX6 768 aa16.54■□□□□ 0.24
COL1A1-205ENST00000476387 RETSATQ6NUM9 610 aa16.54■□□□□ 0.24
COL1A1-205ENST00000476387 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.54■□□□□ 0.24
COL1A1-205ENST00000476387 CCNI2Q6ZMN8 369 aaPredicted RBP16.54■□□□□ 0.24
COL1A1-205ENST00000476387 DNAAF5Q86Y56 855 aa16.54■□□□□ 0.24
COL1A1-205ENST00000476387 RNF214Q8ND24 703 aa16.54■□□□□ 0.24
COL1A1-205ENST00000476387 SERAC1Q96JX3 654 aa16.54■□□□□ 0.24
COL1A1-205ENST00000476387 ELF4Q99607 663 aaPredicted RBP16.54■□□□□ 0.24
COL1A1-205ENST00000476387 MRPL47Q9HD33 250 aaKnown RBP16.54■□□□□ 0.24
COL1A1-205ENST00000476387 TMEM248Q9NWD8 314 aa16.54■□□□□ 0.24
COL1A1-205ENST00000476387 MYO1AQ9UBC5 1043 aa16.54■□□□□ 0.24
COL1A1-205ENST00000476387 ZNF212Q9UDV6 495 aa16.54■□□□□ 0.24
COL1A1-205ENST00000476387 PLXNA2O75051 1894 aa16.54■□□□□ 0.24
COL1A1-205ENST00000476387 TBC1D3DA0A087WVF3 549 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 TBC1D3IA0A087WXS9 549 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 TBC1D3EA0A087X179 549 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 TBC1D3KA0A087X1G2 549 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 TBC1D3FA6NER0 549 aaPredicted RBP16.53■□□□□ 0.24
COL1A1-205ENST00000476387 SRRM3A6NNA2 597 aaPredicted RBP16.53■□□□□ 0.24
COL1A1-205ENST00000476387 TBC1D3LB9A6J9 549 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 FAM72CH0Y354 149 aa16.53■□□□□ 0.24
COL1A1-205ENST00000476387 PLRG1O43660 514 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms