RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 OSGEPQ9NPF4 335 aa21.6■■□□□ 1.05
LIME1-204ENST00000476183 DNAAF2Q9NVR5 837 aaKnown RBP21.6■■□□□ 1.05
LIME1-204ENST00000476183 PCSK1NQ9UHG2 260 aa21.6■■□□□ 1.05
LIME1-204ENST00000476183 AP4E1Q9UPM8 1137 aa21.6■■□□□ 1.05
LIME1-204ENST00000476183 SCINQ9Y6U3 715 aa21.6■■□□□ 1.05
LIME1-204ENST00000476183 DOCK9Q9BZ29 2069 aa21.6■■□□□ 1.05
LIME1-204ENST00000476183 CABIN1Q9Y6J0 2220 aa21.6■■□□□ 1.05
LIME1-204ENST00000476183 A0A1B0GVT2 93 aa21.59■■□□□ 1.05
LIME1-204ENST00000476183 A0A1W2PPC4 97 aa21.59■■□□□ 1.05
LIME1-204ENST00000476183 WASH4PA8MWX3 477 aa21.59■■□□□ 1.05
LIME1-204ENST00000476183 OPHN1O60890 802 aa21.59■■□□□ 1.05
LIME1-204ENST00000476183 MIPP30301 263 aa21.59■■□□□ 1.05
LIME1-204ENST00000476183 ETFBP38117 255 aa21.59■■□□□ 1.05
LIME1-204ENST00000476183 NOVA1P51513 510 aaKnown RBP21.59■■□□□ 1.05
LIME1-204ENST00000476183 AFF3P51826 1226 aaKnown RBP21.59■■□□□ 1.05
LIME1-204ENST00000476183 PPP2CBP62714 309 aa21.59■■□□□ 1.05
LIME1-204ENST00000476183 PPP2CAP67775 309 aa21.59■■□□□ 1.05
LIME1-204ENST00000476183 PSAPL1Q6NUJ1 521 aa21.59■■□□□ 1.05
LIME1-204ENST00000476183 LEKR1Q6ZMV7 388 aa21.59■■□□□ 1.05
LIME1-204ENST00000476183 TMIEQ8NEW7 156 aa21.59■■□□□ 1.05
LIME1-204ENST00000476183 ARRDC3Q96B67 414 aa21.59■■□□□ 1.05
LIME1-204ENST00000476183 CCDC114Q96M63 670 aa21.59■■□□□ 1.05
LIME1-204ENST00000476183 SNRNP25Q9BV90 132 aaKnown RBP21.59■■□□□ 1.05
LIME1-204ENST00000476183 ZDHHC5Q9C0B5 715 aa21.59■■□□□ 1.05
LIME1-204ENST00000476183 KLC2Q9H0B6 622 aa21.59■■□□□ 1.05
LIME1-204ENST00000476183 THAP2Q9H0W7 228 aa21.59■■□□□ 1.05
LIME1-204ENST00000476183 FARP1Q9Y4F1 1045 aaPredicted RBP21.59■■□□□ 1.05
LIME1-204ENST00000476183 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.59■■□□□ 1.05
LIME1-204ENST00000476183 WASF2Q9Y6W5 498 aa21.59■■□□□ 1.05
LIME1-204ENST00000476183 SLC7A4O43246 635 aa21.58■■□□□ 1.05
LIME1-204ENST00000476183 PLRG1O43660 514 aaKnown RBP21.58■■□□□ 1.05
LIME1-204ENST00000476183 LRCH4O75427 683 aa21.58■■□□□ 1.05
LIME1-204ENST00000476183 TPM3P06753 285 aa21.58■■□□□ 1.05
LIME1-204ENST00000476183 ADRB1P08588 477 aa21.58■■□□□ 1.05
LIME1-204ENST00000476183 CSRP1P21291 193 aaKnown RBP21.58■■□□□ 1.05
LIME1-204ENST00000476183 HNRNPH3P31942 346 aaKnown RBP21.58■■□□□ 1.05
LIME1-204ENST00000476183 CCR5P51681 352 aa21.58■■□□□ 1.05
LIME1-204ENST00000476183 ARSIQ5FYB1 569 aa21.58■■□□□ 1.05
LIME1-204ENST00000476183 ERMARDQ5T6L9 678 aa21.58■■□□□ 1.05
LIME1-204ENST00000476183 N4BP2L1Q5TBK1 243 aaPredicted RBP21.58■■□□□ 1.05
LIME1-204ENST00000476183 VPS36Q86VN1 386 aa21.58■■□□□ 1.05
LIME1-204ENST00000476183 PCDH20Q8N6Y1 951 aaKnown RBP21.58■■□□□ 1.05
LIME1-204ENST00000476183 GRIN3AQ8TCU5 1115 aa21.58■■□□□ 1.05
LIME1-204ENST00000476183 KCTD15Q96SI1 283 aaPredicted RBP21.58■■□□□ 1.05
LIME1-204ENST00000476183 DHX35Q9H5Z1 703 aaKnown RBP21.58■■□□□ 1.05
LIME1-204ENST00000476183 IL21RQ9HBE5 538 aa21.58■■□□□ 1.05
LIME1-204ENST00000476183 MRPL47Q9HD33 250 aaKnown RBP21.58■■□□□ 1.05
LIME1-204ENST00000476183 NENFQ9UMX5 172 aa21.58■■□□□ 1.05
LIME1-204ENST00000476183 TBC1D3DA0A087WVF3 549 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 TBC1D3IA0A087WXS9 549 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 TBC1D3EA0A087X179 549 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 TBC1D3KA0A087X1G2 549 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 CXorf51AA0A1B0GTR3 108 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 TBC1D3FA6NER0 549 aaPredicted RBP21.57■■□□□ 1.04
LIME1-204ENST00000476183 TBC1D3LB9A6J9 549 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 KPNA3O00505 521 aaPredicted RBP21.57■■□□□ 1.04
LIME1-204ENST00000476183 CBFA2T2O43439 604 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 KDELR3O43731 214 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 LEFTY1O75610 366 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 RNF8O76064 485 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 TBC1D3HP0C7X1 549 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 CD59P13987 128 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 GRIA4P48058 902 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 DNA2P51530 1060 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 TAS2R38P59533 333 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 TPI1P60174 286 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 KIF19Q2TAC6 998 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 CARD16Q5EG05 197 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 KCNT1Q5JUK3 1230 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 PIP5KL1Q5T9C9 394 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 SPECC1LQ69YQ0 1117 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 TBC1D3GQ6DHY5 549 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 TBC1D3CQ6IPX1 549 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 PIP4P1Q86T03 277 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 TBC1D3Q8IZP1 549 aaPredicted RBP21.57■■□□□ 1.04
LIME1-204ENST00000476183 DEFB124Q8NES8 71 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 ARHGEF26Q96DR7 871 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 HMCESQ96FZ2 354 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 SLC6A18Q96N87 628 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 TM6SF2Q9BZW4 377 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 CATSPERBQ9H7T0 1116 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 IL36AQ9UHA7 158 aa21.57■■□□□ 1.04
LIME1-204ENST00000476183 TMEM131Q92545 1883 aa21.56■■□□□ 1.04
LIME1-204ENST00000476183 UPK3BL1B0FP48 263 aa21.56■■□□□ 1.04
LIME1-204ENST00000476183 RASA4BC9J798 803 aa21.56■■□□□ 1.04
LIME1-204ENST00000476183 UPK3BL2E5RIL1 263 aa21.56■■□□□ 1.04
LIME1-204ENST00000476183 WNT9AO14904 365 aa21.56■■□□□ 1.04
LIME1-204ENST00000476183 FGF10O15520 208 aaPredicted RBP21.56■■□□□ 1.04
LIME1-204ENST00000476183 RASA4O43374 803 aa21.56■■□□□ 1.04
LIME1-204ENST00000476183 PRPSAP2O60256 369 aa21.56■■□□□ 1.04
LIME1-204ENST00000476183 PRNPP04156 253 aa21.56■■□□□ 1.04
LIME1-204ENST00000476183 TCF4P15884 667 aa21.56■■□□□ 1.04
LIME1-204ENST00000476183 RECQLP46063 649 aaPredicted RBP21.56■■□□□ 1.04
LIME1-204ENST00000476183 CCNHP51946 323 aaPredicted RBP21.56■■□□□ 1.04
LIME1-204ENST00000476183 HLA-BQ31612 363 aa21.56■■□□□ 1.04
LIME1-204ENST00000476183 ALKBH5Q6P6C2 394 aaKnown RBP21.56■■□□□ 1.04
LIME1-204ENST00000476183 VSTM4Q8IW00 320 aa21.56■■□□□ 1.04
LIME1-204ENST00000476183 UMODL1-AS1Q8N2C9 162 aa21.56■■□□□ 1.04
LIME1-204ENST00000476183 VOPP1Q96AW1 172 aa21.56■■□□□ 1.04
LIME1-204ENST00000476183 ISG20Q96AZ6 181 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms