RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 CA12O43570 354 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 PEX1O43933 1283 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 FTCDO95954 541 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 ALDOAP04075 364 aaKnown RBP4.41□□□□□ -1.7
VPS13D-207ENST00000476169 DLDP09622 509 aaKnown RBP4.41□□□□□ -1.7
VPS13D-207ENST00000476169 CCDC175P0C221 793 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 FDPSP14324 419 aaKnown RBP4.41□□□□□ -1.7
VPS13D-207ENST00000476169 ZFXP17010 805 aaPredicted RBP4.41□□□□□ -1.7
VPS13D-207ENST00000476169 CD72P21854 359 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 HPDP32754 393 aaPredicted RBP4.41□□□□□ -1.7
VPS13D-207ENST00000476169 HNF1BP35680 557 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 CPOXP36551 454 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 GP5P40197 560 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 AMPHP49418 695 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 MFAP4P55083 255 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 TXNL4AP83876 142 aaKnown RBP4.41□□□□□ -1.7
VPS13D-207ENST00000476169 E2F1Q01094 437 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 CEBPZQ03701 1054 aaKnown RBP4.41□□□□□ -1.7
VPS13D-207ENST00000476169 ALKBH1Q13686 389 aaKnown RBP4.41□□□□□ -1.7
VPS13D-207ENST00000476169 R3HDM1Q15032 1099 aaKnown RBP4.41□□□□□ -1.7
VPS13D-207ENST00000476169 CYP1B1Q16678 543 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 KRTAP19-4Q3LI73 84 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 ZSCAN23Q3MJ62 389 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 USP39Q53GS9 565 aaKnown RBP4.41□□□□□ -1.7
VPS13D-207ENST00000476169 ZNF667Q5HYK9 610 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 CCDC158Q5M9N0 1113 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 CAVIN1Q6NZI2 390 aaKnown RBP4.41□□□□□ -1.7
VPS13D-207ENST00000476169 WDR93Q6P2C0 686 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 ALKBH5Q6P6C2 394 aaKnown RBP4.41□□□□□ -1.7
VPS13D-207ENST00000476169 C11orf88Q6PI97 169 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 CNSTQ6PJW8 725 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 SLC2A7Q6PXP3 512 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 C16orf89Q6UX73 402 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 SLC46A3Q7Z3Q1 461 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 ZNF804AQ7Z570 1209 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 RHPN2Q8IUC4 686 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 ARHGEF19Q8IW93 802 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 VPS52Q8N1B4 723 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 TTC9BQ8N6N2 239 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 SIRT6Q8N6T7 355 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 PLD5Q8N7P1 536 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 SYT2Q8N9I0 419 aaPredicted RBP4.41□□□□□ -1.7
VPS13D-207ENST00000476169 TDRD5Q8NAT2 981 aaKnown RBP4.41□□□□□ -1.7
VPS13D-207ENST00000476169 KIF18AQ8NI77 898 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 SETD6Q8TBK2 473 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 ASB10Q8WXI3 467 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 CTHRC1Q96CG8 243 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 C1orf74Q96LT6 269 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 C8orf49Q96NF6 230 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 AIFM2Q9BRQ8 373 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 FSD1Q9BTV5 496 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 HEMGNQ9BXL5 484 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 MMADHCQ9H3L0 296 aaPredicted RBP4.41□□□□□ -1.7
VPS13D-207ENST00000476169 POLR1BQ9H9Y6 1135 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 FBRSL1Q9HCM7 1045 aaKnown RBP4.41□□□□□ -1.7
VPS13D-207ENST00000476169 SELENONQ9NZV5 590 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 ANKFY1Q9P2R3 1169 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 SEC63Q9UGP8 760 aaKnown RBP4.41□□□□□ -1.7
VPS13D-207ENST00000476169 VPS4AQ9UN37 437 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 FZD1Q9UP38 647 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 PA2G4Q9UQ80 394 aaKnown RBP4.41□□□□□ -1.7
VPS13D-207ENST00000476169 MTMR6Q9Y217 621 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 ADAM18Q9Y3Q7 739 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 ADGRF5Q8IZF2 1346 aa4.41□□□□□ -1.7
VPS13D-207ENST00000476169 A0A0G2JLL6 359 aaPredicted RBP4.4□□□□□ -1.71
VPS13D-207ENST00000476169 A0A0U1RQK1 487 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 LOC100996750A0A140TA64 210 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 ZNF320A2RRD8 509 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 VWC2LB2RUY7 222 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 TMPRSS11DO60235 418 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 CEP104O60308 925 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 HBP1O60381 514 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 CCNT1O60563 726 aaKnown RBP4.4□□□□□ -1.71
VPS13D-207ENST00000476169 TACC1O75410 805 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 PSMD10O75832 226 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 C1SP09871 688 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 NR2F6P10588 404 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 CYP4B1P13584 511 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 KRT10P13645 584 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 C6P13671 934 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 DESP17661 470 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 HOXA5P20719 270 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 POU1F1P28069 291 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 IGHMBP2P38935 993 aaKnown RBP4.4□□□□□ -1.71
VPS13D-207ENST00000476169 STAT2P52630 851 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 TLE3Q04726 772 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 PLP2Q04941 152 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 DEUP1Q05D60 604 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 COASYQ13057 564 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 BMPR2Q13873 1038 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 BYSLQ13895 437 aaKnown RBP4.4□□□□□ -1.71
VPS13D-207ENST00000476169 NFE2L1Q14494 772 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 PTPRRQ15256 657 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 GSTA3Q16772 222 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 TXNRD1Q16881 649 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 AP5B1Q2VPB7 878 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 FAM171A1Q5VUB5 890 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 ERICH6BQ5W0A0 696 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 DENND2CQ68D51 928 aa4.4□□□□□ -1.71
VPS13D-207ENST00000476169 IYDQ6PHW0 289 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms