RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 PPCSQ9HAB8 311 aa6.86□□□□□ -1.31
SMC5-203ENST00000475540 SUFUQ9UMX1 484 aa6.86□□□□□ -1.31
SMC5-203ENST00000475540 OR6C75A6NL08 312 aa6.85□□□□□ -1.31
SMC5-203ENST00000475540 HSPB6O14558 160 aa6.85□□□□□ -1.31
SMC5-203ENST00000475540 ANP32CO43423 234 aa6.85□□□□□ -1.31
SMC5-203ENST00000475540 SMAD6O43541 496 aaKnown RBP6.85□□□□□ -1.31
SMC5-203ENST00000475540 ENO3P13929 434 aaPredicted RBP6.85□□□□□ -1.31
SMC5-203ENST00000475540 RFC1P35251 1148 aaPredicted RBP6.85□□□□□ -1.31
SMC5-203ENST00000475540 GJC1P36383 396 aa6.85□□□□□ -1.31
SMC5-203ENST00000475540 NANOS2P60321 138 aaKnown RBP6.85□□□□□ -1.31
SMC5-203ENST00000475540 PKP1Q13835 747 aa6.85□□□□□ -1.31
SMC5-203ENST00000475540 IL13RA2Q14627 380 aa6.85□□□□□ -1.31
SMC5-203ENST00000475540 TMEM71Q6P5X7 295 aa6.85□□□□□ -1.31
SMC5-203ENST00000475540 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.85□□□□□ -1.31
SMC5-203ENST00000475540 SERPINA11Q86U17 422 aa6.85□□□□□ -1.31
SMC5-203ENST00000475540 HERC6Q8IVU3 1022 aa6.85□□□□□ -1.31
SMC5-203ENST00000475540 SUGP1Q8IWZ8 645 aaKnown RBP6.85□□□□□ -1.31
SMC5-203ENST00000475540 FBXL14Q8N1E6 418 aa6.85□□□□□ -1.31
SMC5-203ENST00000475540 CEP76Q8TAP6 659 aa6.85□□□□□ -1.31
SMC5-203ENST00000475540 COG8Q96MW5 612 aa6.85□□□□□ -1.31
SMC5-203ENST00000475540 ZPBPQ9BS86 351 aa6.85□□□□□ -1.31
SMC5-203ENST00000475540 POLR3GLQ9BT43 218 aa6.85□□□□□ -1.31
SMC5-203ENST00000475540 ISCA1Q9BUE6 129 aa6.85□□□□□ -1.31
SMC5-203ENST00000475540 CTDSP1Q9GZU7 261 aa6.85□□□□□ -1.31
SMC5-203ENST00000475540 TLR8Q9NR97 1041 aaKnown RBP6.85□□□□□ -1.31
SMC5-203ENST00000475540 RASSF1Q9NS23 344 aa6.85□□□□□ -1.31
SMC5-203ENST00000475540 SEL1LQ9UBV2 794 aa6.85□□□□□ -1.31
SMC5-203ENST00000475540 FBXO40Q9UH90 709 aa6.85□□□□□ -1.31
SMC5-203ENST00000475540 PCDHA7Q9UN72 937 aa6.85□□□□□ -1.31
SMC5-203ENST00000475540 DNAJC16Q9Y2G8 782 aa6.85□□□□□ -1.31
SMC5-203ENST00000475540 A0A0A0MQY5 61 aa6.84□□□□□ -1.31
SMC5-203ENST00000475540 TARSL2A2RTX5 802 aaKnown RBP6.84□□□□□ -1.31
SMC5-203ENST00000475540 MS4A18H0YCH9 400 aa6.84□□□□□ -1.31
SMC5-203ENST00000475540 HBP1O60381 514 aa6.84□□□□□ -1.31
SMC5-203ENST00000475540 EIF5BO60841 1220 aaKnown RBP6.84□□□□□ -1.31
SMC5-203ENST00000475540 IL1AP01583 271 aa6.84□□□□□ -1.31
SMC5-203ENST00000475540 HOXD3P31249 432 aaPredicted RBP6.84□□□□□ -1.31
SMC5-203ENST00000475540 DPP6P42658 865 aa6.84□□□□□ -1.31
SMC5-203ENST00000475540 MTNR1AP48039 350 aa6.84□□□□□ -1.31
SMC5-203ENST00000475540 ANKRD1Q15327 319 aa6.84□□□□□ -1.31
SMC5-203ENST00000475540 NPLQ9BXD5 320 aaPredicted RBP6.84□□□□□ -1.31
SMC5-203ENST00000475540 KLHL31Q9H511 634 aa6.84□□□□□ -1.31
SMC5-203ENST00000475540 GRHL1Q9NZI5 618 aa6.84□□□□□ -1.31
SMC5-203ENST00000475540 CD207Q9UJ71 328 aa6.84□□□□□ -1.31
SMC5-203ENST00000475540 SPRY3O43610 288 aa6.83□□□□□ -1.32
SMC5-203ENST00000475540 DHX16O60231 1041 aaKnown RBP6.83□□□□□ -1.32
SMC5-203ENST00000475540 YWHAQP27348 245 aa6.83□□□□□ -1.32
SMC5-203ENST00000475540 PPP3CCP48454 512 aa6.83□□□□□ -1.32
SMC5-203ENST00000475540 EFR3AQ14156 821 aa6.83□□□□□ -1.32
SMC5-203ENST00000475540 FBXO47Q5MNV8 452 aa6.83□□□□□ -1.32
SMC5-203ENST00000475540 DNTTIP2Q5QJE6 756 aaKnown RBP6.83□□□□□ -1.32
SMC5-203ENST00000475540 SH2D4BQ5SQS7 431 aa6.83□□□□□ -1.32
SMC5-203ENST00000475540 FNBP1LQ5T0N5 605 aa6.83□□□□□ -1.32
SMC5-203ENST00000475540 PALB2Q86YC2 1186 aa6.83□□□□□ -1.32
SMC5-203ENST00000475540 TMC8Q8IU68 726 aa6.83□□□□□ -1.32
SMC5-203ENST00000475540 SLC35F5Q8WV83 523 aa6.83□□□□□ -1.32
SMC5-203ENST00000475540 SH3KBP1Q96B97 665 aa6.83□□□□□ -1.32
SMC5-203ENST00000475540 RNFT2Q96EX2 444 aa6.83□□□□□ -1.32
SMC5-203ENST00000475540 DDTLA6NHG4 134 aaPredicted RBP6.82□□□□□ -1.32
SMC5-203ENST00000475540 C17orf100A8MU93 164 aa6.82□□□□□ -1.32
SMC5-203ENST00000475540 LACTBL1A8MY62 500 aa6.82□□□□□ -1.32
SMC5-203ENST00000475540 PIP5K1CO60331 668 aa6.82□□□□□ -1.32
SMC5-203ENST00000475540 LCATP04180 440 aa6.82□□□□□ -1.32
SMC5-203ENST00000475540 MMP3P08254 477 aa6.82□□□□□ -1.32
SMC5-203ENST00000475540 HOXC6P09630 235 aa6.82□□□□□ -1.32
SMC5-203ENST00000475540 HNF1BP35680 557 aa6.82□□□□□ -1.32
SMC5-203ENST00000475540 CDH12P55289 794 aa6.82□□□□□ -1.32
SMC5-203ENST00000475540 TRAF1Q13077 416 aa6.82□□□□□ -1.32
SMC5-203ENST00000475540 ERV3-1Q14264 604 aa6.82□□□□□ -1.32
SMC5-203ENST00000475540 FSCBQ5H9T9 825 aa6.82□□□□□ -1.32
SMC5-203ENST00000475540 GJB7Q6PEY0 223 aa6.82□□□□□ -1.32
SMC5-203ENST00000475540 LDHAL6AQ6ZMR3 332 aa6.82□□□□□ -1.32
SMC5-203ENST00000475540 ZNF367Q7RTV3 350 aa6.82□□□□□ -1.32
SMC5-203ENST00000475540 IQCF1Q8N6M8 205 aa6.82□□□□□ -1.32
SMC5-203ENST00000475540 ANKRD42Q8N9B4 389 aa6.82□□□□□ -1.32
SMC5-203ENST00000475540 USP38Q8NB14 1042 aa6.82□□□□□ -1.32
SMC5-203ENST00000475540 GFM1Q96RP9 751 aaKnown RBP6.82□□□□□ -1.32
SMC5-203ENST00000475540 PYM1Q9BRP8 204 aaKnown RBP6.82□□□□□ -1.32
SMC5-203ENST00000475540 DCLK3Q9C098 648 aa6.82□□□□□ -1.32
SMC5-203ENST00000475540 FZD10Q9ULW2 581 aa6.82□□□□□ -1.32
SMC5-203ENST00000475540 MYO6Q9UM54 1294 aa6.82□□□□□ -1.32
SMC5-203ENST00000475540 PTGDR2Q9Y5Y4 395 aa6.82□□□□□ -1.32
SMC5-203ENST00000475540 A0A1B0GVT2 93 aa6.81□□□□□ -1.32
SMC5-203ENST00000475540 INAFM1C9JVW0 142 aa6.81□□□□□ -1.32
SMC5-203ENST00000475540 I6L893 689 aaPredicted RBP6.81□□□□□ -1.32
SMC5-203ENST00000475540 EYA2O00167 538 aa6.81□□□□□ -1.32
SMC5-203ENST00000475540 VWA5AO00534 786 aa6.81□□□□□ -1.32
SMC5-203ENST00000475540 RGS14O43566 566 aa6.81□□□□□ -1.32
SMC5-203ENST00000475540 LIASO43766 372 aa6.81□□□□□ -1.32
SMC5-203ENST00000475540 PPFIA1Q13136 1202 aa6.81□□□□□ -1.32
SMC5-203ENST00000475540 GPS2Q13227 327 aa6.81□□□□□ -1.32
SMC5-203ENST00000475540 NCAPH2Q6IBW4 605 aa6.81□□□□□ -1.32
SMC5-203ENST00000475540 TRIM74Q86UV6 250 aa6.81□□□□□ -1.32
SMC5-203ENST00000475540 TRIM73Q86UV7 250 aa6.81□□□□□ -1.32
SMC5-203ENST00000475540 GHDCQ8N2G8 530 aa6.81□□□□□ -1.32
SMC5-203ENST00000475540 PRR26Q8N8Z3 221 aa6.81□□□□□ -1.32
SMC5-203ENST00000475540 SETD9Q8NE22 299 aa6.81□□□□□ -1.32
SMC5-203ENST00000475540 ZSCAN31Q96LW9 406 aaPredicted RBP6.81□□□□□ -1.32
SMC5-203ENST00000475540 TTC12Q9H892 705 aaPredicted RBP6.81□□□□□ -1.32
SMC5-203ENST00000475540 NLKQ9UBE8 527 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms